RNA–Protein interactions for RNA: ENST00000529045.1

PTPN22-208, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 4

Gene PTPN22, Length 527 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-208ENST00000529045 A2MP01023 1474 aa9.81□□□□□ -0.84
PTPN22-208ENST00000529045 GRIPAP1Q4V328 841 aa9.81□□□□□ -0.84
PTPN22-208ENST00000529045 MORN1Q5T089 497 aa9.81□□□□□ -0.84
PTPN22-208ENST00000529045 WWC1Q8IX03 1113 aa9.81□□□□□ -0.84
PTPN22-208ENST00000529045 CALR3Q96L12 384 aaKnown RBP9.81□□□□□ -0.84
PTPN22-208ENST00000529045 HIRIP3Q9BW71 556 aaPredicted RBP9.81□□□□□ -0.84
PTPN22-208ENST00000529045 NUDCQ9Y266 331 aa9.81□□□□□ -0.84
PTPN22-208ENST00000529045 SPATA31E1Q6ZUB1 1445 aa9.81□□□□□ -0.84
PTPN22-208ENST00000529045 ZC3H13Q5T200 1668 aaKnown RBP9.8□□□□□ -0.84
PTPN22-208ENST00000529045 KTN1Q86UP2 1357 aaKnown RBP9.8□□□□□ -0.84
PTPN22-208ENST00000529045 PER1O15534 1290 aaPredicted RBP9.8□□□□□ -0.84
PTPN22-208ENST00000529045 PUS10Q3MIT2 529 aaKnown RBP9.8□□□□□ -0.84
PTPN22-208ENST00000529045 PRR7Q8TB68 274 aa9.8□□□□□ -0.84
PTPN22-208ENST00000529045 MRS2Q9HD23 443 aa9.8□□□□□ -0.84
PTPN22-208ENST00000529045 UGGT1Q9NYU2 1555 aa9.8□□□□□ -0.84
PTPN22-208ENST00000529045 XIRP1Q702N8 1843 aaKnown RBP9.79□□□□□ -0.84
PTPN22-208ENST00000529045 PZPP20742 1482 aa9.79□□□□□ -0.84
PTPN22-208ENST00000529045 RPRD2Q5VT52 1461 aaKnown RBP9.79□□□□□ -0.84
PTPN22-208ENST00000529045 PLEKHH2Q8IVE3 1493 aa9.79□□□□□ -0.84
PTPN22-208ENST00000529045 ROCK1Q13464 1354 aa9.79□□□□□ -0.84
PTPN22-208ENST00000529045 C11orf95C9JLR9 678 aaPredicted RBP9.79□□□□□ -0.84
PTPN22-208ENST00000529045 ACTN4O43707 911 aaKnown RBP9.79□□□□□ -0.84
PTPN22-208ENST00000529045 PDIA4P13667 645 aaKnown RBP9.79□□□□□ -0.84
PTPN22-208ENST00000529045 IRX6P78412 446 aaPredicted RBP9.79□□□□□ -0.84
PTPN22-208ENST00000529045 B4GALNT3Q6L9W6 998 aa9.79□□□□□ -0.84
PTPN22-208ENST00000529045 ANKLE2Q86XL3 938 aa9.79□□□□□ -0.84
PTPN22-208ENST00000529045 ZNF516Q92618 1163 aa9.79□□□□□ -0.84
PTPN22-208ENST00000529045 NECTIN2Q92692 538 aa9.79□□□□□ -0.84
PTPN22-208ENST00000529045 SLC27A5Q9Y2P5 690 aa9.79□□□□□ -0.84
PTPN22-208ENST00000529045 FAM135BQ49AJ0 1406 aa9.79□□□□□ -0.84
PTPN22-208ENST00000529045 TNRQ92752 1358 aa9.78□□□□□ -0.84
PTPN22-208ENST00000529045 SYCP2Q9BX26 1530 aa9.78□□□□□ -0.84
PTPN22-208ENST00000529045 KDM5DQ9BY66 1539 aa9.78□□□□□ -0.84
PTPN22-208ENST00000529045 TCERG1O14776 1098 aaKnown RBP9.78□□□□□ -0.84
PTPN22-208ENST00000529045 KMT5BQ4FZB7 885 aa9.78□□□□□ -0.84
PTPN22-208ENST00000529045 POTEAQ6S8J7 498 aa9.78□□□□□ -0.84
PTPN22-208ENST00000529045 IRX2Q9BZI1 471 aaPredicted RBP9.78□□□□□ -0.84
PTPN22-208ENST00000529045 IL21Q9HBE4 155 aa9.78□□□□□ -0.84
PTPN22-208ENST00000529045 ROCK2O75116 1388 aaKnown RBP9.77□□□□□ -0.84
PTPN22-208ENST00000529045 PPM1GO15355 546 aaPredicted RBP9.77□□□□□ -0.85
PTPN22-208ENST00000529045 VAC14Q08AM6 782 aa9.77□□□□□ -0.85
PTPN22-208ENST00000529045 RETREG3Q86VR2 466 aa9.77□□□□□ -0.85
PTPN22-208ENST00000529045 CCDC136Q96JN2 1154 aa9.77□□□□□ -0.85
PTPN22-208ENST00000529045 KIAA1107Q9UPP5 1409 aa9.76□□□□□ -0.85
PTPN22-208ENST00000529045 NR6A1Q15406 480 aa9.76□□□□□ -0.85
PTPN22-208ENST00000529045 THEMISQ8N1K5 641 aaPredicted RBP9.76□□□□□ -0.85
PTPN22-208ENST00000529045 ROBO1Q9Y6N7 1651 aa9.76□□□□□ -0.85
PTPN22-208ENST00000529045 SPAG9O60271 1321 aaKnown RBP9.76□□□□□ -0.85
PTPN22-208ENST00000529045 CDK12Q9NYV4 1490 aaPredicted RBP9.75□□□□□ -0.85
PTPN22-208ENST00000529045 COPS2P61201 443 aa9.75□□□□□ -0.85
PTPN22-208ENST00000529045 WASHC4Q2M389 1173 aa9.75□□□□□ -0.85
PTPN22-208ENST00000529045 HDGFL1Q5TGJ6 251 aa9.75□□□□□ -0.85
PTPN22-208ENST00000529045 BLOC1S3Q6QNY0 202 aa9.75□□□□□ -0.85
PTPN22-208ENST00000529045 RNF19BQ6ZMZ0 732 aa9.75□□□□□ -0.85
PTPN22-208ENST00000529045 RETREG2Q8NC44 543 aa9.75□□□□□ -0.85
PTPN22-208ENST00000529045 WASHC2CQ9Y4E1 1318 aa9.75□□□□□ -0.85
PTPN22-208ENST00000529045 INSRP06213 1382 aa9.75□□□□□ -0.85
PTPN22-208ENST00000529045 NKX2-3Q8TAU0 364 aa9.74□□□□□ -0.85
PTPN22-208ENST00000529045 TRAIPQ9BWF2 469 aa9.74□□□□□ -0.85
PTPN22-208ENST00000529045 ANKRD30BQ9BXX2 1392 aa9.74□□□□□ -0.85
PTPN22-208ENST00000529045 DESI1Q6ICB0 168 aa9.73□□□□□ -0.85
PTPN22-208ENST00000529045 FAM9BQ8IZU0 186 aa9.73□□□□□ -0.85
PTPN22-208ENST00000529045 ALG2Q9H553 416 aa9.73□□□□□ -0.85
PTPN22-208ENST00000529045 DHX29Q7Z478 1369 aaKnown RBP9.73□□□□□ -0.85
PTPN22-208ENST00000529045 MBD5Q9P267 1494 aa9.72□□□□□ -0.85
PTPN22-208ENST00000529045 CFAP70Q5T0N1 1121 aa9.72□□□□□ -0.85
PTPN22-208ENST00000529045 PPP1R18Q6NYC8 613 aa9.72□□□□□ -0.85
PTPN22-208ENST00000529045 PHLPP1O60346 1717 aa9.72□□□□□ -0.85
PTPN22-208ENST00000529045 KIF7Q2M1P5 1343 aa9.72□□□□□ -0.85
PTPN22-208ENST00000529045 PDE3BQ13370 1112 aa9.71□□□□□ -0.86
PTPN22-208ENST00000529045 Q3C1V9 767 aa9.71□□□□□ -0.86
PTPN22-208ENST00000529045 CCDC184Q52MB2 194 aa9.71□□□□□ -0.86
PTPN22-208ENST00000529045 LYPD8Q6UX82 237 aa9.71□□□□□ -0.86
PTPN22-208ENST00000529045 UCN2Q96RP3 112 aa9.71□□□□□ -0.86
PTPN22-208ENST00000529045 MPHOSPH9Q99550 1183 aa9.71□□□□□ -0.86
PTPN22-208ENST00000529045 LRPPRCP42704 1394 aaKnown RBP9.71□□□□□ -0.86
PTPN22-208ENST00000529045 GGT6Q6P531 493 aa9.7□□□□□ -0.86
PTPN22-208ENST00000529045 L3MBTL2Q969R5 705 aa9.7□□□□□ -0.86
PTPN22-208ENST00000529045 THAP11Q96EK4 314 aa9.7□□□□□ -0.86
PTPN22-208ENST00000529045 JCADQ9P266 1359 aa9.7□□□□□ -0.86
PTPN22-208ENST00000529045 UBR1Q8IWV7 1749 aa9.7□□□□□ -0.86
PTPN22-208ENST00000529045 RTEL1-TNFRSF6BF6WH68 1400 aa9.69□□□□□ -0.86
PTPN22-208ENST00000529045 BRD4O60885 1362 aaPredicted RBP9.69□□□□□ -0.86
PTPN22-208ENST00000529045 SRPK2P78362 688 aaKnown RBP9.69□□□□□ -0.86
PTPN22-208ENST00000529045 ZNF772Q68DY9 489 aaPredicted RBP9.69□□□□□ -0.86
PTPN22-208ENST00000529045 BRICD5Q6PL45 260 aa9.69□□□□□ -0.86
PTPN22-208ENST00000529045 SCAF11Q99590 1463 aaKnown RBP9.69□□□□□ -0.86
PTPN22-208ENST00000529045 SHPRHQ149N8 1683 aa9.68□□□□□ -0.86
PTPN22-208ENST00000529045 ABCC3O15438 1527 aa9.68□□□□□ -0.86
PTPN22-208ENST00000529045 PRR14Q9BWN1 585 aa9.68□□□□□ -0.86
PTPN22-208ENST00000529045 PPP1R12CQ9BZL4 782 aa9.68□□□□□ -0.86
PTPN22-208ENST00000529045 SALL2Q9Y467 1007 aaPredicted RBP9.68□□□□□ -0.86
PTPN22-208ENST00000529045 PCDHB3Q9Y5E6 796 aa9.68□□□□□ -0.86
PTPN22-208ENST00000529045 E9PCH4 1651 aa9.67□□□□□ -0.86
PTPN22-208ENST00000529045 COL16A1Q07092 1604 aaPredicted RBP9.67□□□□□ -0.86
PTPN22-208ENST00000529045 SLIT1O75093 1534 aa9.67□□□□□ -0.86
PTPN22-208ENST00000529045 KIF15Q9NS87 1388 aa9.67□□□□□ -0.86
PTPN22-208ENST00000529045 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.67□□□□□ -0.86
PTPN22-208ENST00000529045 F12P00748 615 aaPredicted RBP9.67□□□□□ -0.86
PTPN22-208ENST00000529045 PBXIP1Q96AQ6 731 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms