RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 DCAF5Q96JK2 942 aa21.37■■□□□ 1.01
CTSB-215ENST00000528965 KNSTRNQ9Y448 316 aa21.37■■□□□ 1.01
CTSB-215ENST00000528965 YBX3P16989 372 aaKnown RBP eCLIP21.36■■□□□ 1.01
CTSB-215ENST00000528965 ATG3Q9NT62 314 aa21.36■■□□□ 1.01
CTSB-215ENST00000528965 ZNF530Q6P9A1 599 aaPredicted RBP21.35■■□□□ 1.01
CTSB-215ENST00000528965 KDRP35968 1356 aa21.35■■□□□ 1.01
CTSB-215ENST00000528965 ITPK1Q13572 414 aa21.34■■□□□ 1.01
CTSB-215ENST00000528965 AMIGO3Q86WK7 504 aa21.34■■□□□ 1.01
CTSB-215ENST00000528965 GIGYF1O75420 1035 aaPredicted RBP21.33■■□□□ 1.01
CTSB-215ENST00000528965 C1orf141Q5JVX7 400 aa21.33■■□□□ 1.01
CTSB-215ENST00000528965 ZNF831Q5JPB2 1677 aa21.33■■□□□ 1
CTSB-215ENST00000528965 C1QTNF8P60827 252 aa21.32■■□□□ 1
CTSB-215ENST00000528965 CABP4P57796 275 aa21.31■■□□□ 1
CTSB-215ENST00000528965 RTCBQ9Y3I0 505 aaKnown RBP21.31■■□□□ 1
CTSB-215ENST00000528965 KDM6AO15550 1401 aaPredicted RBP21.3■■□□□ 1
CTSB-215ENST00000528965 RBM42Q9BTD8 480 aaKnown RBP21.3■■□□□ 1
CTSB-215ENST00000528965 GOLGB1Q14789 3259 aaKnown RBP21.3■■□□□ 1
CTSB-215ENST00000528965 ADRA2BP18089 450 aa21.29■■□□□ 1
CTSB-215ENST00000528965 MTHFSP49914 203 aa21.29■■□□□ 1
CTSB-215ENST00000528965 SENP3-EIF4A1A0A087X0R7 540 aa21.28■■□□□ 1
CTSB-215ENST00000528965 SMIM5Q71RC9 77 aa21.28■■□□□ 1
CTSB-215ENST00000528965 AEBP1Q8IUX7 1158 aa21.28■■□□□ 1
CTSB-215ENST00000528965 CNTNAP4Q9C0A0 1308 aa21.28■■□□□ 1
CTSB-215ENST00000528965 TRAPPC3LQ5T215 181 aa21.27■■□□□ 1
CTSB-215ENST00000528965 RC3H1Q5TC82 1133 aaKnown RBP21.27■■□□□ 1
CTSB-215ENST00000528965 SULT6B1Q6IMI4 303 aa21.27■■□□□ 1
CTSB-215ENST00000528965 MMP10P09238 476 aa21.26■□□□□ 0.99
CTSB-215ENST00000528965 COL5A3P25940 1745 aaPredicted RBP21.25■□□□□ 0.99
CTSB-215ENST00000528965 NLGN1Q8N2Q7 840 aa21.25■□□□□ 0.99
CTSB-215ENST00000528965 ATP10DQ9P241 1426 aa21.25■□□□□ 0.99
CTSB-215ENST00000528965 IL13P35225 146 aa21.24■□□□□ 0.99
CTSB-215ENST00000528965 AMER1Q5JTC6 1135 aaPredicted RBP21.24■□□□□ 0.99
CTSB-215ENST00000528965 KIF7Q2M1P5 1343 aa21.24■□□□□ 0.99
CTSB-215ENST00000528965 RFC4P35249 363 aa21.23■□□□□ 0.99
CTSB-215ENST00000528965 SLC4A9Q96Q91 983 aa21.23■□□□□ 0.99
CTSB-215ENST00000528965 CICQ96RK0 1608 aaPredicted RBP21.22■□□□□ 0.99
CTSB-215ENST00000528965 RPS6KA4O75676 772 aa21.22■□□□□ 0.99
CTSB-215ENST00000528965 PTCD1O75127 700 aaKnown RBP21.21■□□□□ 0.99
CTSB-215ENST00000528965 ADCY9O60503 1353 aa21.21■□□□□ 0.99
CTSB-215ENST00000528965 AKAP4Q5JQC9 854 aa21.2■□□□□ 0.98
CTSB-215ENST00000528965 NFATC2IPQ8NCF5 419 aa21.2■□□□□ 0.98
CTSB-215ENST00000528965 ARHGEF1Q92888 912 aaKnown RBP21.2■□□□□ 0.98
CTSB-215ENST00000528965 CCDC87Q9NVE4 849 aa21.2■□□□□ 0.98
CTSB-215ENST00000528965 C10orf71Q711Q0 1435 aa21.2■□□□□ 0.98
CTSB-215ENST00000528965 PXDNLA1KZ92 1463 aa21.2■□□□□ 0.98
CTSB-215ENST00000528965 TGFB2P61812 414 aa21.19■□□□□ 0.98
CTSB-215ENST00000528965 GPBP1L1Q9HC44 474 aaPredicted RBP21.19■□□□□ 0.98
CTSB-215ENST00000528965 WWC3Q9ULE0 1092 aa21.19■□□□□ 0.98
CTSB-215ENST00000528965 KIF13BQ9NQT8 1826 aa21.18■□□□□ 0.98
CTSB-215ENST00000528965 GYS1P13807 737 aa21.18■□□□□ 0.98
CTSB-215ENST00000528965 CRKLP46109 303 aaKnown RBP21.18■□□□□ 0.98
CTSB-215ENST00000528965 PARP3Q9Y6F1 533 aa21.18■□□□□ 0.98
CTSB-215ENST00000528965 C4AP0C0L4 1744 aa21.18■□□□□ 0.98
CTSB-215ENST00000528965 SCN11AQ9UI33 1791 aa21.18■□□□□ 0.98
CTSB-215ENST00000528965 MRC1P22897 1456 aa21.16■□□□□ 0.98
CTSB-215ENST00000528965 SLC52A2Q9HAB3 445 aa21.16■□□□□ 0.98
CTSB-215ENST00000528965 TJP1Q07157 1748 aa21.15■□□□□ 0.98
CTSB-215ENST00000528965 DIAPH1O60610 1272 aaKnown RBP21.14■□□□□ 0.97
CTSB-215ENST00000528965 USP42Q9H9J4 1324 aaKnown RBP21.13■□□□□ 0.97
CTSB-215ENST00000528965 HMOX1P09601 288 aa21.13■□□□□ 0.97
CTSB-215ENST00000528965 CC2D1BQ5T0F9 858 aaKnown RBP21.13■□□□□ 0.97
CTSB-215ENST00000528965 BCS1LQ9Y276 419 aa21.13■□□□□ 0.97
CTSB-215ENST00000528965 MYH14Q7Z406 1995 aaKnown RBP21.13■□□□□ 0.97
CTSB-215ENST00000528965 KIAA1551Q9HCM1 1747 aa21.12■□□□□ 0.97
CTSB-215ENST00000528965 NPC1L1Q9UHC9 1359 aa21.12■□□□□ 0.97
CTSB-215ENST00000528965 ZNF526Q8TF50 670 aaPredicted RBP21.12■□□□□ 0.97
CTSB-215ENST00000528965 RNMTO43148 476 aaKnown RBP21.11■□□□□ 0.97
CTSB-215ENST00000528965 A0A0G2JLW4 131 aa21.1■□□□□ 0.97
CTSB-215ENST00000528965 PER1O15534 1290 aaPredicted RBP21.1■□□□□ 0.97
CTSB-215ENST00000528965 N4BP2Q86UW6 1770 aaPredicted RBP21.1■□□□□ 0.97
CTSB-215ENST00000528965 ZPR1O75312 459 aa21.09■□□□□ 0.97
CTSB-215ENST00000528965 DPEP1P16444 411 aa21.09■□□□□ 0.97
CTSB-215ENST00000528965 FCHSD2O94868 740 aa21.08■□□□□ 0.97
CTSB-215ENST00000528965 INTS5Q6P9B9 1019 aaKnown RBP21.08■□□□□ 0.97
CTSB-215ENST00000528965 DNAJC10Q8IXB1 793 aa21.08■□□□□ 0.97
CTSB-215ENST00000528965 LGR6Q9HBX8 967 aa21.08■□□□□ 0.97
CTSB-215ENST00000528965 SRP68Q9UHB9 627 aaKnown RBP21.08■□□□□ 0.97
CTSB-215ENST00000528965 ADAMTS7Q9UKP4 1686 aa21.08■□□□□ 0.96
CTSB-215ENST00000528965 FKBP8Q14318 412 aa21.07■□□□□ 0.96
CTSB-215ENST00000528965 MTHFSDQ2M296 383 aaKnown RBP21.07■□□□□ 0.96
CTSB-215ENST00000528965 KCPQ6ZWJ8 1503 aa21.07■□□□□ 0.96
CTSB-215ENST00000528965 SOS1Q07889 1333 aaPredicted RBP21.06■□□□□ 0.96
CTSB-215ENST00000528965 TTC5Q8N0Z6 440 aa21.06■□□□□ 0.96
CTSB-215ENST00000528965 COL3A1P02461 1466 aaPredicted RBP21.06■□□□□ 0.96
CTSB-215ENST00000528965 SLC39A6Q13433 755 aa21.05■□□□□ 0.96
CTSB-215ENST00000528965 ARHGAP27Q6ZUM4 889 aa21.05■□□□□ 0.96
CTSB-215ENST00000528965 VSIG10Q8N0Z9 540 aa21.05■□□□□ 0.96
CTSB-215ENST00000528965 GAS2L2Q8NHY3 880 aa21.05■□□□□ 0.96
CTSB-215ENST00000528965 PIM2Q9P1W9 311 aa21.05■□□□□ 0.96
CTSB-215ENST00000528965 COL15A1P39059 1388 aa21.05■□□□□ 0.96
CTSB-215ENST00000528965 U2SURPO15042 1029 aaKnown RBP21.04■□□□□ 0.96
CTSB-215ENST00000528965 CYP19A1P11511 503 aaPredicted RBP21.04■□□□□ 0.96
CTSB-215ENST00000528965 DDR1Q08345 913 aa21.04■□□□□ 0.96
CTSB-215ENST00000528965 BRCA1P38398 1863 aaKnown RBP21.04■□□□□ 0.96
CTSB-215ENST00000528965 DALRD3Q5D0E6 543 aaKnown RBP21.03■□□□□ 0.96
CTSB-215ENST00000528965 USPL1Q5W0Q7 1092 aa21.03■□□□□ 0.96
CTSB-215ENST00000528965 VIRMAQ69YN4 1812 aaKnown RBP21.03■□□□□ 0.96
CTSB-215ENST00000528965 POLRMTO00411 1230 aaKnown RBP21.02■□□□□ 0.96
CTSB-215ENST00000528965 UBR2Q8IWV8 1755 aa21.01■□□□□ 0.95
CTSB-215ENST00000528965 STARD3NLO95772 234 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms