RNA–Protein interactions for RNA: ENST00000528873.2

GEN1-204, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 5

Gene GEN1, Length 871 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-204ENST00000528873 DBN1Q16643 649 aa8.93□□□□□ -0.98
GEN1-204ENST00000528873 PROSER2Q86WR7 435 aaPredicted RBP8.93□□□□□ -0.98
GEN1-204ENST00000528873 TRIM22Q8IYM9 498 aa8.93□□□□□ -0.98
GEN1-204ENST00000528873 H7C1W4 665 aa8.92□□□□□ -0.98
GEN1-204ENST00000528873 SCNN1DP51172 638 aa8.92□□□□□ -0.98
GEN1-204ENST00000528873 NCOA4Q13772 614 aa8.92□□□□□ -0.98
GEN1-204ENST00000528873 TLR1Q15399 786 aa8.92□□□□□ -0.98
GEN1-204ENST00000528873 RNFT1Q5M7Z0 435 aa8.92□□□□□ -0.98
GEN1-204ENST00000528873 FOXR1Q6PIV2 292 aa8.92□□□□□ -0.98
GEN1-204ENST00000528873 F11P03951 625 aa8.91□□□□□ -0.98
GEN1-204ENST00000528873 C4orf17Q53FE4 359 aa8.91□□□□□ -0.98
GEN1-204ENST00000528873 PPARGC1BQ86YN6 1023 aaKnown RBP8.91□□□□□ -0.98
GEN1-204ENST00000528873 DEPDC4Q8N2C3 294 aa8.91□□□□□ -0.98
GEN1-204ENST00000528873 FNBP4Q8N3X1 1017 aaPredicted RBP8.91□□□□□ -0.98
GEN1-204ENST00000528873 ZNF837Q96EG3 531 aaPredicted RBP8.91□□□□□ -0.98
GEN1-204ENST00000528873 SERTAD1Q9UHV2 236 aa8.91□□□□□ -0.98
GEN1-204ENST00000528873 PCDHGA11Q9Y5H2 935 aa8.91□□□□□ -0.98
GEN1-204ENST00000528873 RHBDD1Q8TEB9 315 aa8.9□□□□□ -0.98
GEN1-204ENST00000528873 USP17L5A8MUK1 530 aa8.89□□□□□ -0.99
GEN1-204ENST00000528873 SMTNP53814 917 aa8.89□□□□□ -0.99
GEN1-204ENST00000528873 GTF2IP78347 998 aa8.89□□□□□ -0.99
GEN1-204ENST00000528873 PSME1Q06323 249 aa8.89□□□□□ -0.99
GEN1-204ENST00000528873 TBC1D9Q6ZT07 1266 aa8.89□□□□□ -0.99
GEN1-204ENST00000528873 GTPBP3Q969Y2 492 aaKnown RBP8.89□□□□□ -0.99
GEN1-204ENST00000528873 GPAMQ9HCL2 828 aa8.89□□□□□ -0.99
GEN1-204ENST00000528873 A0A1B0GTH6 734 aa8.88□□□□□ -0.99
GEN1-204ENST00000528873 A6NJR5 290 aa8.88□□□□□ -0.99
GEN1-204ENST00000528873 TMEM229AB2RXF0 380 aa8.88□□□□□ -0.99
GEN1-204ENST00000528873 GPR25O00155 361 aa8.88□□□□□ -0.99
GEN1-204ENST00000528873 NUCKS1Q9H1E3 243 aaKnown RBP8.88□□□□□ -0.99
GEN1-204ENST00000528873 SLC4A9Q96Q91 983 aa8.87□□□□□ -0.99
GEN1-204ENST00000528873 UCN2Q96RP3 112 aa8.87□□□□□ -0.99
GEN1-204ENST00000528873 BACH1O14867 736 aa8.86□□□□□ -0.99
GEN1-204ENST00000528873 ATP9BO43861 1147 aa8.86□□□□□ -0.99
GEN1-204ENST00000528873 CSB-PGBD3P0DP91 1061 aa8.86□□□□□ -0.99
GEN1-204ENST00000528873 MSX1P28360 303 aa8.86□□□□□ -0.99
GEN1-204ENST00000528873 TRIM50Q86XT4 487 aa8.86□□□□□ -0.99
GEN1-204ENST00000528873 PGBD3Q8N328 593 aa8.86□□□□□ -0.99
GEN1-204ENST00000528873 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.86□□□□□ -0.99
GEN1-204ENST00000528873 GLMNQ92990 594 aa8.86□□□□□ -0.99
GEN1-204ENST00000528873 TRERF1Q96PN7 1200 aa8.86□□□□□ -0.99
GEN1-204ENST00000528873 USP17L3A6NCW0 530 aa8.85□□□□□ -0.99
GEN1-204ENST00000528873 USP17L4A6NCW7 530 aa8.85□□□□□ -0.99
GEN1-204ENST00000528873 A6NJY4 79 aa8.85□□□□□ -0.99
GEN1-204ENST00000528873 CDK2AP1O14519 115 aa8.85□□□□□ -0.99
GEN1-204ENST00000528873 PLA2G4AP47712 749 aa8.85□□□□□ -0.99
GEN1-204ENST00000528873 GAS6Q14393 721 aa8.85□□□□□ -0.99
GEN1-204ENST00000528873 USP17L2Q6R6M4 530 aa8.85□□□□□ -0.99
GEN1-204ENST00000528873 USP17L1Q7RTZ2 530 aa8.85□□□□□ -0.99
GEN1-204ENST00000528873 PLEKHM2Q8IWE5 1019 aa8.85□□□□□ -0.99
GEN1-204ENST00000528873 AIDAQ96BJ3 306 aa8.85□□□□□ -0.99
GEN1-204ENST00000528873 NIFKQ9BYG3 293 aaKnown RBP8.85□□□□□ -0.99
GEN1-204ENST00000528873 SLURP2P0DP57 97 aa8.84□□□□□ -0.99
GEN1-204ENST00000528873 CALR3Q96L12 384 aaKnown RBP8.84□□□□□ -0.99
GEN1-204ENST00000528873 RUBCNLQ9H714 662 aa8.84□□□□□ -0.99
GEN1-204ENST00000528873 ZBTB7BO15156 539 aaPredicted RBP8.83□□□□□ -1
GEN1-204ENST00000528873 ADAMTS2O95450 1211 aa8.83□□□□□ -1
GEN1-204ENST00000528873 ATP1A2P50993 1020 aa8.83□□□□□ -1
GEN1-204ENST00000528873 SRSF11Q05519 484 aaKnown RBP8.83□□□□□ -1
GEN1-204ENST00000528873 MTFR1Q15390 333 aa8.83□□□□□ -1
GEN1-204ENST00000528873 ZNF358Q9NW07 568 aa8.83□□□□□ -1
GEN1-204ENST00000528873 TFIP11Q9UBB9 837 aaKnown RBP8.83□□□□□ -1
GEN1-204ENST00000528873 MKRN1Q9UHC7 482 aaKnown RBP8.83□□□□□ -1
GEN1-204ENST00000528873 ZNF385CQ66K41 422 aaPredicted RBP8.82□□□□□ -1
GEN1-204ENST00000528873 WHAMMQ8TF30 809 aa8.82□□□□□ -1
GEN1-204ENST00000528873 MBIPQ9NS73 344 aa8.82□□□□□ -1
GEN1-204ENST00000528873 CABP1Q9NZU7 370 aa8.82□□□□□ -1
GEN1-204ENST00000528873 LBRQ14739 615 aaKnown RBP8.81□□□□□ -1
GEN1-204ENST00000528873 EFHC2Q5JST6 749 aa8.81□□□□□ -1
GEN1-204ENST00000528873 CCDC102BQ68D86 513 aa8.81□□□□□ -1
GEN1-204ENST00000528873 SVOPQ8N4V2 548 aa8.81□□□□□ -1
GEN1-204ENST00000528873 TPCN2Q8NHX9 752 aa8.81□□□□□ -1
GEN1-204ENST00000528873 DNAAF2Q9NVR5 837 aaKnown RBP8.81□□□□□ -1
GEN1-204ENST00000528873 IQSEC3Q9UPP2 1182 aaPredicted RBP8.81□□□□□ -1
GEN1-204ENST00000528873 THBS1P07996 1170 aa8.8□□□□□ -1
GEN1-204ENST00000528873 MX2P20592 715 aa8.8□□□□□ -1
GEN1-204ENST00000528873 CLDN10P78369 228 aa8.8□□□□□ -1
GEN1-204ENST00000528873 OGFOD1Q8N543 542 aa8.8□□□□□ -1
GEN1-204ENST00000528873 CFHR5Q9BXR6 569 aa8.8□□□□□ -1
GEN1-204ENST00000528873 USP3Q9Y6I4 520 aa8.8□□□□□ -1
GEN1-204ENST00000528873 IGF1RP08069 1367 aa8.79□□□□□ -1
GEN1-204ENST00000528873 PALM3A6NDB9 673 aaPredicted RBP8.79□□□□□ -1
GEN1-204ENST00000528873 LYPD4Q6UWN0 246 aa8.79□□□□□ -1
GEN1-204ENST00000528873 TNS4Q8IZW8 715 aa8.79□□□□□ -1
GEN1-204ENST00000528873 LARGE2Q8N3Y3 721 aa8.79□□□□□ -1
GEN1-204ENST00000528873 C1orf216Q8TAB5 229 aa8.79□□□□□ -1
GEN1-204ENST00000528873 SCHIP1Q9P0W5 487 aaPredicted RBP8.79□□□□□ -1
GEN1-204ENST00000528873 ZNF777Q9ULD5 760 aaPredicted RBP8.79□□□□□ -1
GEN1-204ENST00000528873 NSFL1CQ9UNZ2 370 aaKnown RBP8.79□□□□□ -1
GEN1-204ENST00000528873 PHF24Q9UPV7 400 aa8.79□□□□□ -1
GEN1-204ENST00000528873 KIAA1024Q9UPX6 916 aa8.79□□□□□ -1
GEN1-204ENST00000528873 NBPF1Q3BBV0 1214 aa8.78□□□□□ -1
GEN1-204ENST00000528873 ARSJQ5FYB0 599 aaPredicted RBP8.78□□□□□ -1
GEN1-204ENST00000528873 PPP1R12CQ9BZL4 782 aa8.78□□□□□ -1
GEN1-204ENST00000528873 CRISPLD1Q9H336 500 aa8.78□□□□□ -1
GEN1-204ENST00000528873 ADAMTS8Q9UP79 889 aa8.78□□□□□ -1
GEN1-204ENST00000528873 RBM19Q9Y4C8 960 aaKnown RBP8.78□□□□□ -1
GEN1-204ENST00000528873 MAFBQ9Y5Q3 323 aaPredicted RBP8.78□□□□□ -1
GEN1-204ENST00000528873 PARP3Q9Y6F1 533 aa8.78□□□□□ -1
GEN1-204ENST00000528873 RASA1P20936 1047 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms