RNA–Protein interactions for RNA: ENST00000528614.1

AP002008.3-201, humanhuman

TSL 1 (best) BASIC

Gene AP002008.3, Length 2,587 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.3-201ENST00000528614 FAM43AQ8N2R8 423 aa12.94□□□□□ -0.34
AP002008.3-201ENST00000528614 MAP3K5Q99683 1374 aa12.93□□□□□ -0.34
AP002008.3-201ENST00000528614 ATP8B2P98198 1209 aa12.93□□□□□ -0.34
AP002008.3-201ENST00000528614 USHBP1Q8N6Y0 703 aa12.93□□□□□ -0.34
AP002008.3-201ENST00000528614 XRN1Q8IZH2 1706 aaKnown RBP12.93□□□□□ -0.34
AP002008.3-201ENST00000528614 ERC2O15083 957 aa12.93□□□□□ -0.34
AP002008.3-201ENST00000528614 NWD1Q149M9 1564 aa12.93□□□□□ -0.34
AP002008.3-201ENST00000528614 PNMA6EA0A0J9YXQ4 647 aa12.92□□□□□ -0.34
AP002008.3-201ENST00000528614 REC8O95072 547 aa12.92□□□□□ -0.34
AP002008.3-201ENST00000528614 PANK2Q9BZ23 570 aa12.92□□□□□ -0.34
AP002008.3-201ENST00000528614 BABAM1Q9NWV8 329 aa12.92□□□□□ -0.34
AP002008.3-201ENST00000528614 SKOR2Q2VWA4 1001 aaPredicted RBP12.92□□□□□ -0.34
AP002008.3-201ENST00000528614 LRRCC1Q9C099 1032 aa12.92□□□□□ -0.34
AP002008.3-201ENST00000528614 PTMSP20962 102 aa12.91□□□□□ -0.34
AP002008.3-201ENST00000528614 MRE11P49959 708 aa12.91□□□□□ -0.34
AP002008.3-201ENST00000528614 TSHZ3Q63HK5 1081 aa12.91□□□□□ -0.34
AP002008.3-201ENST00000528614 PHF8Q9UPP1 1060 aa12.91□□□□□ -0.34
AP002008.3-201ENST00000528614 SOS1Q07889 1333 aaPredicted RBP12.91□□□□□ -0.34
AP002008.3-201ENST00000528614 LRRC37A3O60309 1634 aa12.91□□□□□ -0.34
AP002008.3-201ENST00000528614 FER1L4A9Z1Z3 1794 aa12.9□□□□□ -0.34
AP002008.3-201ENST00000528614 LRRFIP2Q9Y608 721 aaKnown RBP12.9□□□□□ -0.34
AP002008.3-201ENST00000528614 SALL3Q9BXA9 1300 aa12.9□□□□□ -0.34
AP002008.3-201ENST00000528614 CLEC17AQ6ZS10 378 aa12.9□□□□□ -0.34
AP002008.3-201ENST00000528614 RBM33Q96EV2 1170 aaKnown RBP12.9□□□□□ -0.34
AP002008.3-201ENST00000528614 USP44Q9H0E7 712 aa12.9□□□□□ -0.34
AP002008.3-201ENST00000528614 PHAXQ9H814 394 aaKnown RBP12.9□□□□□ -0.34
AP002008.3-201ENST00000528614 MARF1Q9Y4F3 1742 aaKnown RBP12.9□□□□□ -0.34
AP002008.3-201ENST00000528614 ST18O60284 1047 aa12.89□□□□□ -0.35
AP002008.3-201ENST00000528614 BAG4O95429 457 aaKnown RBP12.89□□□□□ -0.35
AP002008.3-201ENST00000528614 HDGFL1Q5TGJ6 251 aa12.89□□□□□ -0.35
AP002008.3-201ENST00000528614 IP6K1Q92551 441 aa12.89□□□□□ -0.35
AP002008.3-201ENST00000528614 GRPEL1Q9HAV7 217 aa12.89□□□□□ -0.35
AP002008.3-201ENST00000528614 MX1P20591 662 aa12.89□□□□□ -0.35
AP002008.3-201ENST00000528614 NBPF6Q5VWK0 638 aa12.88□□□□□ -0.35
AP002008.3-201ENST00000528614 NBPF4Q96M43 638 aa12.88□□□□□ -0.35
AP002008.3-201ENST00000528614 IBTKQ9P2D0 1353 aaPredicted RBP12.88□□□□□ -0.35
AP002008.3-201ENST00000528614 GOLGA6L22H0YM25 854 aa12.88□□□□□ -0.35
AP002008.3-201ENST00000528614 UBTFL1P0CB47 393 aaPredicted RBP12.88□□□□□ -0.35
AP002008.3-201ENST00000528614 NUCB2P80303 420 aa12.88□□□□□ -0.35
AP002008.3-201ENST00000528614 LGR6Q9HBX8 967 aa12.88□□□□□ -0.35
AP002008.3-201ENST00000528614 ISY1Q9ULR0 285 aaKnown RBP12.88□□□□□ -0.35
AP002008.3-201ENST00000528614 ZBTB7CA1YPR0 619 aa12.87□□□□□ -0.35
AP002008.3-201ENST00000528614 EIF2S2P20042 333 aaKnown RBP12.87□□□□□ -0.35
AP002008.3-201ENST00000528614 GAS2L3Q86XJ1 694 aa12.87□□□□□ -0.35
AP002008.3-201ENST00000528614 RILPL2Q969X0 211 aa12.87□□□□□ -0.35
AP002008.3-201ENST00000528614 ESYT1Q9BSJ8 1104 aa12.87□□□□□ -0.35
AP002008.3-201ENST00000528614 FAM208AQ9UK61 1670 aaKnown RBP12.87□□□□□ -0.35
AP002008.3-201ENST00000528614 TRIM6-TRIM34B2RNG4 842 aa12.87□□□□□ -0.35
AP002008.3-201ENST00000528614 CWC22Q9HCG8 908 aaKnown RBP12.87□□□□□ -0.35
AP002008.3-201ENST00000528614 RRAGDQ9NQL2 400 aaPredicted RBP12.87□□□□□ -0.35
AP002008.3-201ENST00000528614 PSME1Q06323 249 aa12.86□□□□□ -0.35
AP002008.3-201ENST00000528614 ZGPATQ8N5A5 531 aaKnown RBP12.86□□□□□ -0.35
AP002008.3-201ENST00000528614 STAP2Q9UGK3 403 aa12.86□□□□□ -0.35
AP002008.3-201ENST00000528614 USP54Q70EL1 1684 aa12.86□□□□□ -0.35
AP002008.3-201ENST00000528614 CYP2E1P05181 493 aaPredicted RBP12.86□□□□□ -0.35
AP002008.3-201ENST00000528614 EIF4A1P60842 406 aaKnown RBP12.86□□□□□ -0.35
AP002008.3-201ENST00000528614 CEMIPQ8WUJ3 1361 aa12.86□□□□□ -0.35
AP002008.3-201ENST00000528614 CHMLP26374 656 aa12.85□□□□□ -0.35
AP002008.3-201ENST00000528614 PKP1Q13835 747 aa12.85□□□□□ -0.35
AP002008.3-201ENST00000528614 ESCO1Q5FWF5 840 aa12.85□□□□□ -0.35
AP002008.3-201ENST00000528614 ANKLE2Q86XL3 938 aa12.85□□□□□ -0.35
AP002008.3-201ENST00000528614 SRCIN1Q9C0H9 1055 aa12.85□□□□□ -0.35
AP002008.3-201ENST00000528614 KCNQ3O43525 872 aa12.85□□□□□ -0.35
AP002008.3-201ENST00000528614 MCTP1Q6DN14 999 aa12.85□□□□□ -0.35
AP002008.3-201ENST00000528614 SSH3Q8TE77 659 aa12.85□□□□□ -0.35
AP002008.3-201ENST00000528614 IL1RAPL2Q9NP60 686 aa12.85□□□□□ -0.35
AP002008.3-201ENST00000528614 DDX49Q9Y6V7 483 aaKnown RBP12.85□□□□□ -0.35
AP002008.3-201ENST00000528614 PXDNLA1KZ92 1463 aa12.84□□□□□ -0.35
AP002008.3-201ENST00000528614 NEK4P51957 841 aa12.84□□□□□ -0.35
AP002008.3-201ENST00000528614 PPP1R42Q7Z4L9 355 aa12.84□□□□□ -0.35
AP002008.3-201ENST00000528614 UNC5CLQ8IV45 518 aa12.84□□□□□ -0.35
AP002008.3-201ENST00000528614 ZMYND15Q9H091 742 aa12.84□□□□□ -0.35
AP002008.3-201ENST00000528614 LRRC59Q96AG4 307 aaKnown RBP12.84□□□□□ -0.35
AP002008.3-201ENST00000528614 SURF6O75683 361 aaKnown RBP12.83□□□□□ -0.35
AP002008.3-201ENST00000528614 KLHL40Q2TBA0 621 aa12.83□□□□□ -0.35
AP002008.3-201ENST00000528614 NUTM1Q86Y26 1132 aa12.83□□□□□ -0.35
AP002008.3-201ENST00000528614 KCNH5Q8NCM2 988 aa12.83□□□□□ -0.35
AP002008.3-201ENST00000528614 CHPF2Q9P2E5 772 aa12.83□□□□□ -0.35
AP002008.3-201ENST00000528614 CACNA1FO60840 1977 aa12.83□□□□□ -0.35
AP002008.3-201ENST00000528614 AK9Q5TCS8 1911 aa12.83□□□□□ -0.36
AP002008.3-201ENST00000528614 RAB11FIP3O75154 756 aa12.83□□□□□ -0.36
AP002008.3-201ENST00000528614 POLA2Q14181 598 aa12.83□□□□□ -0.36
AP002008.3-201ENST00000528614 ANO2Q9NQ90 1003 aa12.83□□□□□ -0.36
AP002008.3-201ENST00000528614 MCCP23508 829 aa12.82□□□□□ -0.36
AP002008.3-201ENST00000528614 PALD1Q9ULE6 856 aa12.82□□□□□ -0.36
AP002008.3-201ENST00000528614 ZDHHC9Q9Y397 364 aa12.82□□□□□ -0.36
AP002008.3-201ENST00000528614 LTN1O94822 1766 aa12.82□□□□□ -0.36
AP002008.3-201ENST00000528614 PI4KAP2A4QPH2 592 aa12.82□□□□□ -0.36
AP002008.3-201ENST00000528614 BTBD11A6QL63 1104 aa12.82□□□□□ -0.36
AP002008.3-201ENST00000528614 HOXB7P09629 217 aa12.82□□□□□ -0.36
AP002008.3-201ENST00000528614 NBPF7P0C2Y1 421 aaPredicted RBP12.82□□□□□ -0.36
AP002008.3-201ENST00000528614 TEFQ10587 303 aa12.82□□□□□ -0.36
AP002008.3-201ENST00000528614 AKAP4Q5JQC9 854 aa12.82□□□□□ -0.36
AP002008.3-201ENST00000528614 BEND3Q5T5X7 828 aa12.82□□□□□ -0.36
AP002008.3-201ENST00000528614 ZNF530Q6P9A1 599 aaPredicted RBP12.82□□□□□ -0.36
AP002008.3-201ENST00000528614 MPRIPQ6WCQ1 1025 aa12.82□□□□□ -0.36
AP002008.3-201ENST00000528614 PI4KAP1Q8N8J0 262 aa12.82□□□□□ -0.36
AP002008.3-201ENST00000528614 DNAAF4Q8WXU2 420 aa12.82□□□□□ -0.36
AP002008.3-201ENST00000528614 LMBRD1Q9NUN5 540 aa12.82□□□□□ -0.36
AP002008.3-201ENST00000528614 NFAT5O94916 1531 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms