RNA–Protein interactions for RNA: ENST00000528471.1

CHRDL2-205, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-205ENST00000528471 ZNF831Q5JPB2 1677 aa18.81■□□□□ 0.6
CHRDL2-205ENST00000528471 FLAD1Q8NFF5 587 aa18.8■□□□□ 0.6
CHRDL2-205ENST00000528471 MAP3K5Q99683 1374 aa18.8■□□□□ 0.6
CHRDL2-205ENST00000528471 COL5A3P25940 1745 aaPredicted RBP18.8■□□□□ 0.6
CHRDL2-205ENST00000528471 DIAPH1O60610 1272 aaKnown RBP18.79■□□□□ 0.6
CHRDL2-205ENST00000528471 ATG3Q9NT62 314 aa18.79■□□□□ 0.6
CHRDL2-205ENST00000528471 CHD4Q14839 1912 aa18.79■□□□□ 0.6
CHRDL2-205ENST00000528471 CABP4P57796 275 aa18.78■□□□□ 0.6
CHRDL2-205ENST00000528471 PHF14O94880 888 aa18.77■□□□□ 0.6
CHRDL2-205ENST00000528471 HMOX1P09601 288 aa18.77■□□□□ 0.6
CHRDL2-205ENST00000528471 ATP6V1AP38606 617 aa18.77■□□□□ 0.6
CHRDL2-205ENST00000528471 MSL1Q68DK7 614 aa18.77■□□□□ 0.6
CHRDL2-205ENST00000528471 COL3A1P02461 1466 aaPredicted RBP18.77■□□□□ 0.59
CHRDL2-205ENST00000528471 LINC00116Q8NCU8 138 aa18.76■□□□□ 0.59
CHRDL2-205ENST00000528471 RBM42Q9BTD8 480 aaKnown RBP18.75■□□□□ 0.59
CHRDL2-205ENST00000528471 YY1P25490 414 aa18.74■□□□□ 0.59
CHRDL2-205ENST00000528471 ITPK1Q13572 414 aa18.74■□□□□ 0.59
CHRDL2-205ENST00000528471 UTRNP46939 3433 aa18.74■□□□□ 0.59
CHRDL2-205ENST00000528471 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.74■□□□□ 0.59
CHRDL2-205ENST00000528471 GNPATO15228 680 aa18.74■□□□□ 0.59
CHRDL2-205ENST00000528471 SSFA2P28290 1259 aa18.74■□□□□ 0.59
CHRDL2-205ENST00000528471 AKAP4Q5JQC9 854 aa18.74■□□□□ 0.59
CHRDL2-205ENST00000528471 U2SURPO15042 1029 aaKnown RBP18.73■□□□□ 0.59
CHRDL2-205ENST00000528471 TJP1Q07157 1748 aa18.72■□□□□ 0.59
CHRDL2-205ENST00000528471 MYH14Q7Z406 1995 aaKnown RBP18.72■□□□□ 0.59
CHRDL2-205ENST00000528471 AMIGO3Q86WK7 504 aa18.72■□□□□ 0.59
CHRDL2-205ENST00000528471 NFATC2IPQ8NCF5 419 aa18.72■□□□□ 0.59
CHRDL2-205ENST00000528471 CFAP53Q96M91 514 aa18.72■□□□□ 0.59
CHRDL2-205ENST00000528471 CICQ96RK0 1608 aaPredicted RBP18.71■□□□□ 0.59
CHRDL2-205ENST00000528471 ADAMTS7Q9UKP4 1686 aa18.71■□□□□ 0.59
CHRDL2-205ENST00000528471 MRC1P22897 1456 aa18.71■□□□□ 0.59
CHRDL2-205ENST00000528471 SMIM5Q71RC9 77 aa18.71■□□□□ 0.59
CHRDL2-205ENST00000528471 C4AP0C0L4 1744 aa18.71■□□□□ 0.59
CHRDL2-205ENST00000528471 GOLGB1Q14789 3259 aaKnown RBP18.7■□□□□ 0.58
CHRDL2-205ENST00000528471 PTCD1O75127 700 aaKnown RBP18.7■□□□□ 0.58
CHRDL2-205ENST00000528471 GPR162Q16538 588 aa18.69■□□□□ 0.58
CHRDL2-205ENST00000528471 PELP1Q8IZL8 1130 aaKnown RBP18.69■□□□□ 0.58
CHRDL2-205ENST00000528471 SLC4A9Q96Q91 983 aa18.69■□□□□ 0.58
CHRDL2-205ENST00000528471 MTHFSDQ2M296 383 aaKnown RBP18.68■□□□□ 0.58
CHRDL2-205ENST00000528471 NLGN2Q8NFZ4 835 aa18.68■□□□□ 0.58
CHRDL2-205ENST00000528471 SLC52A2Q9HAB3 445 aa18.68■□□□□ 0.58
CHRDL2-205ENST00000528471 RTCBQ9Y3I0 505 aaKnown RBP18.68■□□□□ 0.58
CHRDL2-205ENST00000528471 CNTNAP4Q9C0A0 1308 aa18.68■□□□□ 0.58
CHRDL2-205ENST00000528471 RNMTO43148 476 aaKnown RBP18.66■□□□□ 0.58
CHRDL2-205ENST00000528471 LGR6Q9HBX8 967 aa18.66■□□□□ 0.58
CHRDL2-205ENST00000528471 UBR2Q8IWV8 1755 aa18.66■□□□□ 0.58
CHRDL2-205ENST00000528471 SIPA1L3O60292 1781 aaPredicted RBP18.65■□□□□ 0.58
CHRDL2-205ENST00000528471 TRAPPC3LQ5T215 181 aa18.65■□□□□ 0.58
CHRDL2-205ENST00000528471 RC3H1Q5TC82 1133 aaKnown RBP18.65■□□□□ 0.58
CHRDL2-205ENST00000528471 ADRA2BP18089 450 aa18.64■□□□□ 0.57
CHRDL2-205ENST00000528471 PPP2R1AP30153 589 aa18.64■□□□□ 0.57
CHRDL2-205ENST00000528471 GAS2L2Q8NHY3 880 aa18.64■□□□□ 0.57
CHRDL2-205ENST00000528471 NUDCQ9Y266 331 aa18.64■□□□□ 0.57
CHRDL2-205ENST00000528471 CD2APQ9Y5K6 639 aa18.64■□□□□ 0.57
CHRDL2-205ENST00000528471 RPS6KA4O75676 772 aa18.62■□□□□ 0.57
CHRDL2-205ENST00000528471 RFC4P35249 363 aa18.62■□□□□ 0.57
CHRDL2-205ENST00000528471 KCPQ6ZWJ8 1503 aa18.62■□□□□ 0.57
CHRDL2-205ENST00000528471 PRKAR2BP31323 418 aa18.61■□□□□ 0.57
CHRDL2-205ENST00000528471 CRKLP46109 303 aaKnown RBP18.61■□□□□ 0.57
CHRDL2-205ENST00000528471 KIF13BQ9NQT8 1826 aa18.61■□□□□ 0.57
CHRDL2-205ENST00000528471 GNAT3A8MTJ3 354 aa18.6■□□□□ 0.57
CHRDL2-205ENST00000528471 MMP10P09238 476 aa18.6■□□□□ 0.57
CHRDL2-205ENST00000528471 SLC39A6Q13433 755 aa18.6■□□□□ 0.57
CHRDL2-205ENST00000528471 ARHGEF1Q92888 912 aaKnown RBP18.6■□□□□ 0.57
CHRDL2-205ENST00000528471 U2AF1L5P0DN76 240 aaPredicted RBP18.59■□□□□ 0.57
CHRDL2-205ENST00000528471 U2AF1Q01081 240 aaKnown RBP eCLIP18.59■□□□□ 0.57
CHRDL2-205ENST00000528471 TEFQ10587 303 aa18.59■□□□□ 0.57
CHRDL2-205ENST00000528471 RSPH6AQ9H0K4 717 aa18.59■□□□□ 0.57
CHRDL2-205ENST00000528471 DNAJC10Q8IXB1 793 aa18.58■□□□□ 0.57
CHRDL2-205ENST00000528471 TTC5Q8N0Z6 440 aa18.58■□□□□ 0.57
CHRDL2-205ENST00000528471 NLGN1Q8N2Q7 840 aa18.58■□□□□ 0.57
CHRDL2-205ENST00000528471 N4BP2Q86UW6 1770 aaPredicted RBP18.57■□□□□ 0.56
CHRDL2-205ENST00000528471 GRIN3BO60391 1043 aa18.56■□□□□ 0.56
CHRDL2-205ENST00000528471 YBX3P16989 372 aaKnown RBP eCLIP18.56■□□□□ 0.56
CHRDL2-205ENST00000528471 CCDC87Q9NVE4 849 aa18.56■□□□□ 0.56
CHRDL2-205ENST00000528471 DLG5Q8TDM6 1919 aa18.56■□□□□ 0.56
CHRDL2-205ENST00000528471 GYS1P13807 737 aa18.55■□□□□ 0.56
CHRDL2-205ENST00000528471 PHACTR3Q96KR7 559 aa18.55■□□□□ 0.56
CHRDL2-205ENST00000528471 KIAA1551Q9HCM1 1747 aa18.55■□□□□ 0.56
CHRDL2-205ENST00000528471 INTS5Q6P9B9 1019 aaKnown RBP18.54■□□□□ 0.56
CHRDL2-205ENST00000528471 VSIG10Q8N0Z9 540 aa18.54■□□□□ 0.56
CHRDL2-205ENST00000528471 IL17REQ8NFR9 667 aa18.54■□□□□ 0.56
CHRDL2-205ENST00000528471 USP42Q9H9J4 1324 aaKnown RBP18.54■□□□□ 0.56
CHRDL2-205ENST00000528471 FCHSD2O94868 740 aa18.53■□□□□ 0.56
CHRDL2-205ENST00000528471 CYP19A1P11511 503 aaPredicted RBP18.53■□□□□ 0.56
CHRDL2-205ENST00000528471 PARP3Q9Y6F1 533 aa18.53■□□□□ 0.56
CHRDL2-205ENST00000528471 CEMIPQ8WUJ3 1361 aa18.52■□□□□ 0.56
CHRDL2-205ENST00000528471 ZNF784Q8NCA9 323 aaPredicted RBP18.52■□□□□ 0.56
CHRDL2-205ENST00000528471 RTF1Q92541 710 aaKnown RBP18.52■□□□□ 0.56
CHRDL2-205ENST00000528471 SRP68Q9UHB9 627 aaKnown RBP18.52■□□□□ 0.56
CHRDL2-205ENST00000528471 C10orf71Q711Q0 1435 aa18.52■□□□□ 0.56
CHRDL2-205ENST00000528471 SOS1Q07889 1333 aaPredicted RBP18.52■□□□□ 0.56
CHRDL2-205ENST00000528471 BRCA1P38398 1863 aaKnown RBP18.52■□□□□ 0.55
CHRDL2-205ENST00000528471 COL15A1P39059 1388 aa18.51■□□□□ 0.55
CHRDL2-205ENST00000528471 ZPR1O75312 459 aa18.51■□□□□ 0.55
CHRDL2-205ENST00000528471 NEFMP07197 916 aa18.51■□□□□ 0.55
CHRDL2-205ENST00000528471 ZNF790Q6PG37 636 aa18.51■□□□□ 0.55
CHRDL2-205ENST00000528471 WWC3Q9ULE0 1092 aa18.51■□□□□ 0.55
CHRDL2-205ENST00000528471 PXDNLA1KZ92 1463 aa18.51■□□□□ 0.55
CHRDL2-205ENST00000528471 STARD3NLO95772 234 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms