RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 UBR3Q6ZT12 1888 aa21.24■□□□□ 0.99
CLNS1A-210ENST00000528364 ERVV-2B6SEH9 535 aa21.23■□□□□ 0.99
CLNS1A-210ENST00000528364 GNPATO15228 680 aa21.23■□□□□ 0.99
CLNS1A-210ENST00000528364 RBM42Q9BTD8 480 aaKnown RBP21.23■□□□□ 0.99
CLNS1A-210ENST00000528364 CD2APQ9Y5K6 639 aa21.23■□□□□ 0.99
CLNS1A-210ENST00000528364 KIF7Q2M1P5 1343 aa21.23■□□□□ 0.99
CLNS1A-210ENST00000528364 SSFA2P28290 1259 aa21.22■□□□□ 0.99
CLNS1A-210ENST00000528364 IL13P35225 146 aa21.22■□□□□ 0.99
CLNS1A-210ENST00000528364 AMER1Q5JTC6 1135 aaPredicted RBP21.22■□□□□ 0.99
CLNS1A-210ENST00000528364 SULT6B1Q6IMI4 303 aa21.22■□□□□ 0.99
CLNS1A-210ENST00000528364 DCAF5Q96JK2 942 aa21.22■□□□□ 0.99
CLNS1A-210ENST00000528364 WWC3Q9ULE0 1092 aa21.21■□□□□ 0.99
CLNS1A-210ENST00000528364 HSP90AB1P08238 724 aaKnown RBP21.2■□□□□ 0.98
CLNS1A-210ENST00000528364 CABP4P57796 275 aa21.2■□□□□ 0.98
CLNS1A-210ENST00000528364 AMOTQ4VCS5 1084 aa21.2■□□□□ 0.98
CLNS1A-210ENST00000528364 KDM6AO15550 1401 aaPredicted RBP21.2■□□□□ 0.98
CLNS1A-210ENST00000528364 GRIN3BO60391 1043 aa21.19■□□□□ 0.98
CLNS1A-210ENST00000528364 MTHFSP49914 203 aa21.19■□□□□ 0.98
CLNS1A-210ENST00000528364 NFATC2IPQ8NCF5 419 aa21.17■□□□□ 0.98
CLNS1A-210ENST00000528364 KDRP35968 1356 aa21.17■□□□□ 0.98
CLNS1A-210ENST00000528364 PLEKHG2Q9H7P9 1386 aa21.16■□□□□ 0.98
CLNS1A-210ENST00000528364 PER1O15534 1290 aaPredicted RBP21.16■□□□□ 0.98
CLNS1A-210ENST00000528364 C1orf141Q5JVX7 400 aa21.16■□□□□ 0.98
CLNS1A-210ENST00000528364 TRAPPC3LQ5T215 181 aa21.16■□□□□ 0.98
CLNS1A-210ENST00000528364 PTCD1O75127 700 aaKnown RBP21.15■□□□□ 0.98
CLNS1A-210ENST00000528364 CC2D1BQ5T0F9 858 aaKnown RBP21.15■□□□□ 0.98
CLNS1A-210ENST00000528364 RTCBQ9Y3I0 505 aaKnown RBP21.15■□□□□ 0.98
CLNS1A-210ENST00000528364 MMP10P09238 476 aa21.14■□□□□ 0.97
CLNS1A-210ENST00000528364 CNGB1Q14028 1251 aaPredicted RBP21.14■□□□□ 0.97
CLNS1A-210ENST00000528364 ARHGEF1Q92888 912 aaKnown RBP21.14■□□□□ 0.97
CLNS1A-210ENST00000528364 HMOX1P09601 288 aa21.13■□□□□ 0.97
CLNS1A-210ENST00000528364 RC3H1Q5TC82 1133 aaKnown RBP21.13■□□□□ 0.97
CLNS1A-210ENST00000528364 LGR6Q9HBX8 967 aa21.13■□□□□ 0.97
CLNS1A-210ENST00000528364 C1QTNF8P60827 252 aa21.12■□□□□ 0.97
CLNS1A-210ENST00000528364 RPS6KA4O75676 772 aa21.11■□□□□ 0.97
CLNS1A-210ENST00000528364 MYH14Q7Z406 1995 aaKnown RBP21.1■□□□□ 0.97
CLNS1A-210ENST00000528364 GOLGB1Q14789 3259 aaKnown RBP21.1■□□□□ 0.97
CLNS1A-210ENST00000528364 CNTNAP4Q9C0A0 1308 aa21.09■□□□□ 0.97
CLNS1A-210ENST00000528364 GYS1P13807 737 aa21.08■□□□□ 0.97
CLNS1A-210ENST00000528364 RFC4P35249 363 aa21.08■□□□□ 0.97
CLNS1A-210ENST00000528364 CRKLP46109 303 aaKnown RBP21.08■□□□□ 0.97
CLNS1A-210ENST00000528364 AKAP4Q5JQC9 854 aa21.08■□□□□ 0.97
CLNS1A-210ENST00000528364 NLGN1Q8N2Q7 840 aa21.08■□□□□ 0.97
CLNS1A-210ENST00000528364 RNMTO43148 476 aaKnown RBP21.06■□□□□ 0.96
CLNS1A-210ENST00000528364 DIAPH1O60610 1272 aaKnown RBP21.06■□□□□ 0.96
CLNS1A-210ENST00000528364 GIGYF1O75420 1035 aaPredicted RBP21.06■□□□□ 0.96
CLNS1A-210ENST00000528364 ADRA2BP18089 450 aa21.06■□□□□ 0.96
CLNS1A-210ENST00000528364 SLC39A6Q13433 755 aa21.06■□□□□ 0.96
CLNS1A-210ENST00000528364 MTHFSDQ2M296 383 aaKnown RBP21.06■□□□□ 0.96
CLNS1A-210ENST00000528364 SRP68Q9UHB9 627 aaKnown RBP21.06■□□□□ 0.96
CLNS1A-210ENST00000528364 COL5A3P25940 1745 aaPredicted RBP21.05■□□□□ 0.96
CLNS1A-210ENST00000528364 SENP3-EIF4A1A0A087X0R7 540 aa21.05■□□□□ 0.96
CLNS1A-210ENST00000528364 A0A0G2JLW4 131 aa21.05■□□□□ 0.96
CLNS1A-210ENST00000528364 SLC52A2Q9HAB3 445 aa21.05■□□□□ 0.96
CLNS1A-210ENST00000528364 ZNF831Q5JPB2 1677 aa21.05■□□□□ 0.96
CLNS1A-210ENST00000528364 INTS5Q6P9B9 1019 aaKnown RBP21.04■□□□□ 0.96
CLNS1A-210ENST00000528364 DNAJC10Q8IXB1 793 aa21.04■□□□□ 0.96
CLNS1A-210ENST00000528364 ATP10DQ9P241 1426 aa21.04■□□□□ 0.96
CLNS1A-210ENST00000528364 SCN11AQ9UI33 1791 aa21.03■□□□□ 0.96
CLNS1A-210ENST00000528364 CICQ96RK0 1608 aaPredicted RBP21.01■□□□□ 0.95
CLNS1A-210ENST00000528364 DPEP1P16444 411 aa21.01■□□□□ 0.95
CLNS1A-210ENST00000528364 FKBP8Q14318 412 aa21.01■□□□□ 0.95
CLNS1A-210ENST00000528364 ZNF526Q8TF50 670 aaPredicted RBP21.01■□□□□ 0.95
CLNS1A-210ENST00000528364 PARP3Q9Y6F1 533 aa21.01■□□□□ 0.95
CLNS1A-210ENST00000528364 PXDNLA1KZ92 1463 aa21.01■□□□□ 0.95
CLNS1A-210ENST00000528364 TGFB2P61812 414 aa21■□□□□ 0.95
CLNS1A-210ENST00000528364 U2SURPO15042 1029 aaKnown RBP20.99■□□□□ 0.95
CLNS1A-210ENST00000528364 CCDC87Q9NVE4 849 aa20.99■□□□□ 0.95
CLNS1A-210ENST00000528364 BCS1LQ9Y276 419 aa20.99■□□□□ 0.95
CLNS1A-210ENST00000528364 N4BP2Q86UW6 1770 aaPredicted RBP20.99■□□□□ 0.95
CLNS1A-210ENST00000528364 TJP1Q07157 1748 aa20.98■□□□□ 0.95
CLNS1A-210ENST00000528364 DDR1Q08345 913 aa20.98■□□□□ 0.95
CLNS1A-210ENST00000528364 USP42Q9H9J4 1324 aaKnown RBP20.98■□□□□ 0.95
CLNS1A-210ENST00000528364 C10orf71Q711Q0 1435 aa20.97■□□□□ 0.95
CLNS1A-210ENST00000528364 CYP19A1P11511 503 aaPredicted RBP20.97■□□□□ 0.95
CLNS1A-210ENST00000528364 GPBP1L1Q9HC44 474 aaPredicted RBP20.97■□□□□ 0.95
CLNS1A-210ENST00000528364 KIF13BQ9NQT8 1826 aa20.97■□□□□ 0.95
CLNS1A-210ENST00000528364 ADCY9O60503 1353 aa20.97■□□□□ 0.95
CLNS1A-210ENST00000528364 C4AP0C0L4 1744 aa20.96■□□□□ 0.95
CLNS1A-210ENST00000528364 KIAA1551Q9HCM1 1747 aa20.96■□□□□ 0.95
CLNS1A-210ENST00000528364 KCNA3P22001 575 aa20.96■□□□□ 0.95
CLNS1A-210ENST00000528364 NPC1L1Q9UHC9 1359 aa20.96■□□□□ 0.95
CLNS1A-210ENST00000528364 USPL1Q5W0Q7 1092 aa20.95■□□□□ 0.94
CLNS1A-210ENST00000528364 IL17REQ8NFR9 667 aa20.95■□□□□ 0.94
CLNS1A-210ENST00000528364 COL3A1P02461 1466 aaPredicted RBP20.94■□□□□ 0.94
CLNS1A-210ENST00000528364 TM4SF1P30408 202 aa20.94■□□□□ 0.94
CLNS1A-210ENST00000528364 ARHGAP27Q6ZUM4 889 aa20.94■□□□□ 0.94
CLNS1A-210ENST00000528364 SOS1Q07889 1333 aaPredicted RBP20.94■□□□□ 0.94
CLNS1A-210ENST00000528364 VIRMAQ69YN4 1812 aaKnown RBP20.94■□□□□ 0.94
CLNS1A-210ENST00000528364 ZPR1O75312 459 aa20.93■□□□□ 0.94
CLNS1A-210ENST00000528364 FCHSD2O94868 740 aa20.93■□□□□ 0.94
CLNS1A-210ENST00000528364 ZBTB1Q9Y2K1 713 aa20.93■□□□□ 0.94
CLNS1A-210ENST00000528364 MRC1P22897 1456 aa20.93■□□□□ 0.94
CLNS1A-210ENST00000528364 POLRMTO00411 1230 aaKnown RBP20.92■□□□□ 0.94
CLNS1A-210ENST00000528364 PHACTR3Q96KR7 559 aa20.92■□□□□ 0.94
CLNS1A-210ENST00000528364 KCPQ6ZWJ8 1503 aa20.92■□□□□ 0.94
CLNS1A-210ENST00000528364 CANXP27824 592 aaKnown RBP20.91■□□□□ 0.94
CLNS1A-210ENST00000528364 CHRNA5P30532 468 aa20.91■□□□□ 0.94
CLNS1A-210ENST00000528364 ADAMTS7Q9UKP4 1686 aa20.91■□□□□ 0.94
CLNS1A-210ENST00000528364 GNAT3A8MTJ3 354 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms