RNA–Protein interactions for RNA: ENST00000528150.1

USP33-215, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 3

Gene USP33, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-215ENST00000528150 GAS2L2Q8NHY3 880 aa22.03■■□□□ 1.12
USP33-215ENST00000528150 RBM42Q9BTD8 480 aaKnown RBP22.03■■□□□ 1.12
USP33-215ENST00000528150 COL3A1P02461 1466 aaPredicted RBP22.03■■□□□ 1.12
USP33-215ENST00000528150 NEFMP07197 916 aa22.02■■□□□ 1.12
USP33-215ENST00000528150 PPP2R1AP30153 589 aa22.02■■□□□ 1.12
USP33-215ENST00000528150 ARXQ96QS3 562 aa22.02■■□□□ 1.12
USP33-215ENST00000528150 ATG3Q9NT62 314 aa22.02■■□□□ 1.12
USP33-215ENST00000528150 KDM6AO15550 1401 aaPredicted RBP22.02■■□□□ 1.12
USP33-215ENST00000528150 PTGER2P43116 358 aa22■■□□□ 1.11
USP33-215ENST00000528150 ZNF831Q5JPB2 1677 aa22■■□□□ 1.11
USP33-215ENST00000528150 NFATC2IPQ8NCF5 419 aa21.99■■□□□ 1.11
USP33-215ENST00000528150 U2AF1L5P0DN76 240 aaPredicted RBP21.98■■□□□ 1.11
USP33-215ENST00000528150 SSFA2P28290 1259 aa21.98■■□□□ 1.11
USP33-215ENST00000528150 U2AF1Q01081 240 aaKnown RBP eCLIP21.98■■□□□ 1.11
USP33-215ENST00000528150 MTHFSDQ2M296 383 aaKnown RBP21.98■■□□□ 1.11
USP33-215ENST00000528150 UBR3Q6ZT12 1888 aa21.97■■□□□ 1.11
USP33-215ENST00000528150 GNPATO15228 680 aa21.96■■□□□ 1.11
USP33-215ENST00000528150 COL23A1Q86Y22 540 aaPredicted RBP21.96■■□□□ 1.11
USP33-215ENST00000528150 SLC52A2Q9HAB3 445 aa21.96■■□□□ 1.11
USP33-215ENST00000528150 GNAT3A8MTJ3 354 aa21.95■■□□□ 1.1
USP33-215ENST00000528150 RNMTO43148 476 aaKnown RBP21.95■■□□□ 1.1
USP33-215ENST00000528150 PHF14O94880 888 aa21.95■■□□□ 1.1
USP33-215ENST00000528150 KLHL34Q8N239 644 aa21.95■■□□□ 1.1
USP33-215ENST00000528150 LINC00116Q8NCU8 138 aa21.95■■□□□ 1.1
USP33-215ENST00000528150 MAP3K5Q99683 1374 aa21.95■■□□□ 1.1
USP33-215ENST00000528150 PTCD1O75127 700 aaKnown RBP21.94■■□□□ 1.1
USP33-215ENST00000528150 PRKAR2BP31323 418 aa21.94■■□□□ 1.1
USP33-215ENST00000528150 TEFQ10587 303 aa21.94■■□□□ 1.1
USP33-215ENST00000528150 RALBP1Q15311 655 aa21.94■■□□□ 1.1
USP33-215ENST00000528150 SGIP1Q9BQI5 828 aa21.94■■□□□ 1.1
USP33-215ENST00000528150 FHDC1Q9C0D6 1143 aaPredicted RBP21.94■■□□□ 1.1
USP33-215ENST00000528150 PNNQ9H307 717 aaKnown RBP21.94■■□□□ 1.1
USP33-215ENST00000528150 RTCBQ9Y3I0 505 aaKnown RBP21.94■■□□□ 1.1
USP33-215ENST00000528150 COL24A1Q17RW2 1714 aa21.94■■□□□ 1.1
USP33-215ENST00000528150 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.93■■□□□ 1.1
USP33-215ENST00000528150 FCHSD2O94868 740 aa21.93■■□□□ 1.1
USP33-215ENST00000528150 TTC5Q8N0Z6 440 aa21.93■■□□□ 1.1
USP33-215ENST00000528150 DDX10Q13206 875 aaKnown RBP21.92■■□□□ 1.1
USP33-215ENST00000528150 ITPK1Q13572 414 aa21.92■■□□□ 1.1
USP33-215ENST00000528150 RC3H1Q5TC82 1133 aaKnown RBP21.92■■□□□ 1.1
USP33-215ENST00000528150 RTF1Q92541 710 aaKnown RBP21.92■■□□□ 1.1
USP33-215ENST00000528150 MRC1P22897 1456 aa21.91■■□□□ 1.1
USP33-215ENST00000528150 CNTNAP4Q9C0A0 1308 aa21.91■■□□□ 1.1
USP33-215ENST00000528150 ADRA2BP18089 450 aa21.91■■□□□ 1.1
USP33-215ENST00000528150 SYT17Q9BSW7 474 aa21.91■■□□□ 1.1
USP33-215ENST00000528150 COL5A3P25940 1745 aaPredicted RBP21.91■■□□□ 1.1
USP33-215ENST00000528150 TRAPPC3LQ5T215 181 aa21.9■■□□□ 1.1
USP33-215ENST00000528150 RSPH6AQ9H0K4 717 aa21.9■■□□□ 1.1
USP33-215ENST00000528150 LGR6Q9HBX8 967 aa21.9■■□□□ 1.1
USP33-215ENST00000528150 ADAMTS7Q9UKP4 1686 aa21.89■■□□□ 1.1
USP33-215ENST00000528150 MSL1Q68DK7 614 aa21.88■■□□□ 1.09
USP33-215ENST00000528150 CICQ96RK0 1608 aaPredicted RBP21.87■■□□□ 1.09
USP33-215ENST00000528150 RFC4P35249 363 aa21.86■■□□□ 1.09
USP33-215ENST00000528150 RPS6KA4O75676 772 aa21.85■■□□□ 1.09
USP33-215ENST00000528150 VSIG10Q8N0Z9 540 aa21.85■■□□□ 1.09
USP33-215ENST00000528150 MAPK8IP3Q9UPT6 1336 aa21.84■■□□□ 1.09
USP33-215ENST00000528150 TJP1Q07157 1748 aa21.83■■□□□ 1.09
USP33-215ENST00000528150 CRKLP46109 303 aaKnown RBP21.83■■□□□ 1.09
USP33-215ENST00000528150 NLGN1Q8N2Q7 840 aa21.83■■□□□ 1.09
USP33-215ENST00000528150 SLC4A9Q96Q91 983 aa21.83■■□□□ 1.09
USP33-215ENST00000528150 MYBBP1AQ9BQG0 1328 aaKnown RBP21.82■■□□□ 1.08
USP33-215ENST00000528150 HTATSF1O43719 755 aaKnown RBP21.82■■□□□ 1.08
USP33-215ENST00000528150 SLC39A6Q13433 755 aa21.82■■□□□ 1.08
USP33-215ENST00000528150 NPM2Q86SE8 214 aaKnown RBP21.82■■□□□ 1.08
USP33-215ENST00000528150 PHACTR3Q96KR7 559 aa21.82■■□□□ 1.08
USP33-215ENST00000528150 TEX13AQ9BXU3 409 aaPredicted RBP21.82■■□□□ 1.08
USP33-215ENST00000528150 STARD3NLO95772 234 aa21.81■■□□□ 1.08
USP33-215ENST00000528150 GPR162Q16538 588 aa21.81■■□□□ 1.08
USP33-215ENST00000528150 MYH14Q7Z406 1995 aaKnown RBP21.81■■□□□ 1.08
USP33-215ENST00000528150 SIPA1L3O60292 1781 aaPredicted RBP21.8■■□□□ 1.08
USP33-215ENST00000528150 UBR2Q8IWV8 1755 aa21.8■■□□□ 1.08
USP33-215ENST00000528150 IL17REQ8NFR9 667 aa21.8■■□□□ 1.08
USP33-215ENST00000528150 CCDC87Q9NVE4 849 aa21.8■■□□□ 1.08
USP33-215ENST00000528150 CD2APQ9Y5K6 639 aa21.8■■□□□ 1.08
USP33-215ENST00000528150 BTBD11A6QL63 1104 aa21.79■■□□□ 1.08
USP33-215ENST00000528150 ZNF790Q6PG37 636 aa21.79■■□□□ 1.08
USP33-215ENST00000528150 DNAJC10Q8IXB1 793 aa21.79■■□□□ 1.08
USP33-215ENST00000528150 PELP1Q8IZL8 1130 aaKnown RBP21.79■■□□□ 1.08
USP33-215ENST00000528150 ARHGEF1Q92888 912 aaKnown RBP21.79■■□□□ 1.08
USP33-215ENST00000528150 FMNL2Q96PY5 1086 aa21.79■■□□□ 1.08
USP33-215ENST00000528150 CEMIPQ8WUJ3 1361 aa21.78■■□□□ 1.08
USP33-215ENST00000528150 ZPR1O75312 459 aa21.78■■□□□ 1.08
USP33-215ENST00000528150 KCPQ6ZWJ8 1503 aa21.78■■□□□ 1.08
USP33-215ENST00000528150 AMIGO3Q86WK7 504 aa21.77■■□□□ 1.08
USP33-215ENST00000528150 C4AP0C0L4 1744 aa21.77■■□□□ 1.08
USP33-215ENST00000528150 CHD4Q14839 1912 aa21.76■■□□□ 1.07
USP33-215ENST00000528150 YY1P25490 414 aa21.76■■□□□ 1.07
USP33-215ENST00000528150 WDR43Q15061 677 aaKnown RBP eCLIP21.76■■□□□ 1.07
USP33-215ENST00000528150 SMIM5Q71RC9 77 aa21.76■■□□□ 1.07
USP33-215ENST00000528150 PARP3Q9Y6F1 533 aa21.76■■□□□ 1.07
USP33-215ENST00000528150 MMP10P09238 476 aa21.75■■□□□ 1.07
USP33-215ENST00000528150 DLG5Q8TDM6 1919 aa21.74■■□□□ 1.07
USP33-215ENST00000528150 HEG1Q9ULI3 1381 aa21.74■■□□□ 1.07
USP33-215ENST00000528150 CYP19A1P11511 503 aaPredicted RBP21.74■■□□□ 1.07
USP33-215ENST00000528150 PNISRQ8TF01 805 aaKnown RBP21.74■■□□□ 1.07
USP33-215ENST00000528150 A0A087WZG4 1122 aa21.73■■□□□ 1.07
USP33-215ENST00000528150 GRIN3BO60391 1043 aa21.73■■□□□ 1.07
USP33-215ENST00000528150 MCM10Q7L590 875 aa21.73■■□□□ 1.07
USP33-215ENST00000528150 LMOD3Q0VAK6 560 aa21.72■■□□□ 1.07
USP33-215ENST00000528150 NFE2L2Q16236 605 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms