RNA–Protein interactions for RNA: ENST00000527955.5

GPA33-202, Transcript of glycoprotein A33, humanhuman

TSL 5

Gene GPA33, Length 2,549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPA33-202ENST00000527955 SMC5Q8IY18 1101 aa17.66■□□□□ 0.42
GPA33-202ENST00000527955 RNMTO43148 476 aaKnown RBP17.65■□□□□ 0.42
GPA33-202ENST00000527955 G2E3Q7L622 706 aa17.65■□□□□ 0.42
GPA33-202ENST00000527955 CCDC30Q5VVM6 783 aa17.65■□□□□ 0.42
GPA33-202ENST00000527955 ABCA3Q99758 1704 aa17.65■□□□□ 0.42
GPA33-202ENST00000527955 TEFQ10587 303 aa17.64■□□□□ 0.41
GPA33-202ENST00000527955 RAPGEF4Q8WZA2 1011 aa17.64■□□□□ 0.41
GPA33-202ENST00000527955 STK31Q9BXU1 1019 aa17.64■□□□□ 0.41
GPA33-202ENST00000527955 C1orf115Q9H7X2 142 aa17.64■□□□□ 0.41
GPA33-202ENST00000527955 MEGF6O75095 1541 aa17.64■□□□□ 0.41
GPA33-202ENST00000527955 SIPA1L3O60292 1781 aaPredicted RBP17.64■□□□□ 0.41
GPA33-202ENST00000527955 CSB-PGBD3P0DP91 1061 aa17.63■□□□□ 0.41
GPA33-202ENST00000527955 EIF4A1P60842 406 aaKnown RBP17.63■□□□□ 0.41
GPA33-202ENST00000527955 PLEKHG2Q9H7P9 1386 aa17.62■□□□□ 0.41
GPA33-202ENST00000527955 BTBD11A6QL63 1104 aa17.62■□□□□ 0.41
GPA33-202ENST00000527955 KCNQ3O43525 872 aa17.61■□□□□ 0.41
GPA33-202ENST00000527955 SIRT2Q8IXJ6 389 aa17.61■□□□□ 0.41
GPA33-202ENST00000527955 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.61■□□□□ 0.41
GPA33-202ENST00000527955 TATP17735 454 aaPredicted RBP17.61■□□□□ 0.41
GPA33-202ENST00000527955 NECTIN2Q92692 538 aa17.61■□□□□ 0.41
GPA33-202ENST00000527955 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.61■□□□□ 0.41
GPA33-202ENST00000527955 SCN11AQ9UI33 1791 aa17.61■□□□□ 0.41
GPA33-202ENST00000527955 ANP32AP39687 249 aaKnown RBP17.6■□□□□ 0.41
GPA33-202ENST00000527955 FLIIQ13045 1269 aa17.6■□□□□ 0.41
GPA33-202ENST00000527955 PRDM11Q9NQV5 511 aa17.6■□□□□ 0.41
GPA33-202ENST00000527955 PKD1L3Q7Z443 1732 aa17.6■□□□□ 0.41
GPA33-202ENST00000527955 HOXB7P09629 217 aa17.6■□□□□ 0.41
GPA33-202ENST00000527955 HDGFL1Q5TGJ6 251 aa17.6■□□□□ 0.41
GPA33-202ENST00000527955 F6X3S4 739 aa17.59■□□□□ 0.41
GPA33-202ENST00000527955 SPG7Q9UQ90 795 aa17.58■□□□□ 0.41
GPA33-202ENST00000527955 KDM6AO15550 1401 aaPredicted RBP17.58■□□□□ 0.4
GPA33-202ENST00000527955 PHKG2P15735 406 aa17.58■□□□□ 0.4
GPA33-202ENST00000527955 NUCB1Q02818 461 aa17.58■□□□□ 0.4
GPA33-202ENST00000527955 ATP10DQ9P241 1426 aa17.57■□□□□ 0.4
GPA33-202ENST00000527955 N4BP2Q86UW6 1770 aaPredicted RBP17.57■□□□□ 0.4
GPA33-202ENST00000527955 CCT4P50991 539 aaKnown RBP17.57■□□□□ 0.4
GPA33-202ENST00000527955 RTN4Q9NQC3 1192 aaKnown RBP17.57■□□□□ 0.4
GPA33-202ENST00000527955 WDR17Q8IZU2 1322 aa17.57■□□□□ 0.4
GPA33-202ENST00000527955 COL5A2P05997 1499 aaPredicted RBP17.57■□□□□ 0.4
GPA33-202ENST00000527955 FKBP5Q13451 457 aaPredicted RBP17.57■□□□□ 0.4
GPA33-202ENST00000527955 GCC1Q96CN9 775 aa17.57■□□□□ 0.4
GPA33-202ENST00000527955 HEG1Q9ULI3 1381 aa17.56■□□□□ 0.4
GPA33-202ENST00000527955 SLC4A10Q6U841 1118 aa17.56■□□□□ 0.4
GPA33-202ENST00000527955 NPM2Q86SE8 214 aaKnown RBP17.56■□□□□ 0.4
GPA33-202ENST00000527955 MEIS3Q99687 375 aa17.56■□□□□ 0.4
GPA33-202ENST00000527955 IPO9Q96P70 1041 aaKnown RBP17.55■□□□□ 0.4
GPA33-202ENST00000527955 EIF2S2P20042 333 aaKnown RBP17.55■□□□□ 0.4
GPA33-202ENST00000527955 IFNL2Q8IZJ0 200 aa17.55■□□□□ 0.4
GPA33-202ENST00000527955 PXDNLA1KZ92 1463 aa17.54■□□□□ 0.4
GPA33-202ENST00000527955 PARP4Q9UKK3 1724 aaKnown RBP17.54■□□□□ 0.4
GPA33-202ENST00000527955 CYP27B1O15528 508 aa17.54■□□□□ 0.4
GPA33-202ENST00000527955 CHD1LQ86WJ1 897 aa17.54■□□□□ 0.4
GPA33-202ENST00000527955 CHMP4AQ9BY43 222 aa17.54■□□□□ 0.4
GPA33-202ENST00000527955 PHAXQ9H814 394 aaKnown RBP17.54■□□□□ 0.4
GPA33-202ENST00000527955 SLC52A2Q9HAB3 445 aa17.54■□□□□ 0.4
GPA33-202ENST00000527955 ANKRD44Q8N8A2 993 aa17.53■□□□□ 0.4
GPA33-202ENST00000527955 CHPF2Q9P2E5 772 aa17.53■□□□□ 0.4
GPA33-202ENST00000527955 ROBO1Q9Y6N7 1651 aa17.53■□□□□ 0.4
GPA33-202ENST00000527955 MRC1P22897 1456 aa17.53■□□□□ 0.4
GPA33-202ENST00000527955 GIGYF1O75420 1035 aaPredicted RBP17.53■□□□□ 0.4
GPA33-202ENST00000527955 CEP85Q6P2H3 762 aa17.53■□□□□ 0.4
GPA33-202ENST00000527955 RPAP2Q8IXW5 612 aaPredicted RBP17.53■□□□□ 0.4
GPA33-202ENST00000527955 TOM1L2Q6ZVM7 507 aa17.52■□□□□ 0.4
GPA33-202ENST00000527955 LNPKQ9C0E8 428 aa17.52■□□□□ 0.4
GPA33-202ENST00000527955 LTBP4Q8N2S1 1624 aa17.52■□□□□ 0.4
GPA33-202ENST00000527955 DCAF5Q96JK2 942 aa17.51■□□□□ 0.39
GPA33-202ENST00000527955 ANKRD45Q5TZF3 282 aa17.51■□□□□ 0.39
GPA33-202ENST00000527955 DCTPP1Q9H773 170 aa17.51■□□□□ 0.39
GPA33-202ENST00000527955 ZNF790Q6PG37 636 aa17.5■□□□□ 0.39
GPA33-202ENST00000527955 NFATC2IPQ8NCF5 419 aa17.5■□□□□ 0.39
GPA33-202ENST00000527955 AHDC1Q5TGY3 1603 aaPredicted RBP17.49■□□□□ 0.39
GPA33-202ENST00000527955 PRAMEF22A3QJZ6 481 aa17.49■□□□□ 0.39
GPA33-202ENST00000527955 CARD10Q9BWT7 1032 aa17.49■□□□□ 0.39
GPA33-202ENST00000527955 ZBTB47Q9UFB7 747 aaPredicted RBP17.49■□□□□ 0.39
GPA33-202ENST00000527955 DBF4Q9UBU7 674 aaPredicted RBP17.49■□□□□ 0.39
GPA33-202ENST00000527955 SEC24BO95487 1268 aa17.48■□□□□ 0.39
GPA33-202ENST00000527955 HSP90AB1P08238 724 aaKnown RBP17.48■□□□□ 0.39
GPA33-202ENST00000527955 SLC39A6Q13433 755 aa17.48■□□□□ 0.39
GPA33-202ENST00000527955 C5P01031 1676 aa17.48■□□□□ 0.39
GPA33-202ENST00000527955 ANXA1P04083 346 aa17.48■□□□□ 0.39
GPA33-202ENST00000527955 LARP1Q6PKG0 1096 aaKnown RBP17.47■□□□□ 0.39
GPA33-202ENST00000527955 USP35Q9P2H5 1018 aa17.47■□□□□ 0.39
GPA33-202ENST00000527955 SHANK3Q9BYB0 1731 aa17.47■□□□□ 0.39
GPA33-202ENST00000527955 GNAI2P04899 355 aa17.47■□□□□ 0.39
GPA33-202ENST00000527955 STRN4Q9NRL3 753 aa17.47■□□□□ 0.39
GPA33-202ENST00000527955 PCDH11XQ9BZA7 1347 aa17.46■□□□□ 0.39
GPA33-202ENST00000527955 PCDH11YQ9BZA8 1340 aa17.46■□□□□ 0.39
GPA33-202ENST00000527955 GNAI3P08754 354 aa17.46■□□□□ 0.39
GPA33-202ENST00000527955 ZCRB1Q8TBF4 217 aaKnown RBP17.46■□□□□ 0.39
GPA33-202ENST00000527955 COL22A1Q8NFW1 1626 aaPredicted RBP17.46■□□□□ 0.39
GPA33-202ENST00000527955 PROSER3Q2NL68 480 aa17.46■□□□□ 0.38
GPA33-202ENST00000527955 PI4KAP2A4QPH2 592 aa17.45■□□□□ 0.38
GPA33-202ENST00000527955 IL2RBP14784 551 aa17.45■□□□□ 0.38
GPA33-202ENST00000527955 PI4KAP1Q8N8J0 262 aa17.45■□□□□ 0.38
GPA33-202ENST00000527955 USP44Q9H0E7 712 aa17.45■□□□□ 0.38
GPA33-202ENST00000527955 ADCY9O60503 1353 aa17.45■□□□□ 0.38
GPA33-202ENST00000527955 EVA1CP58658 441 aa17.45■□□□□ 0.38
GPA33-202ENST00000527955 DNAAF4Q8WXU2 420 aa17.44■□□□□ 0.38
GPA33-202ENST00000527955 ZNF496Q96IT1 587 aaPredicted RBP17.44■□□□□ 0.38
GPA33-202ENST00000527955 SRCIN1Q9C0H9 1055 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms