RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 C5P01031 1676 aa15.12■□□□□ 0.01
NR1H3-230ENST00000527949 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.12■□□□□ 0.01
NR1H3-230ENST00000527949 HSP90AB1P08238 724 aaKnown RBP15.12■□□□□ 0.01
NR1H3-230ENST00000527949 APLP1P51693 650 aa15.12■□□□□ 0.01
NR1H3-230ENST00000527949 ZNF526Q8TF50 670 aaPredicted RBP15.12■□□□□ 0.01
NR1H3-230ENST00000527949 TAF1LQ8IZX4 1826 aa15.11■□□□□ 0.01
NR1H3-230ENST00000527949 IL13P35225 146 aa15.11■□□□□ 0.01
NR1H3-230ENST00000527949 PLEKHO1Q53GL0 409 aaPredicted RBP15.11■□□□□ 0.01
NR1H3-230ENST00000527949 PIGBQ92521 554 aa15.11■□□□□ 0.01
NR1H3-230ENST00000527949 ERVV-2B6SEH9 535 aa15.1■□□□□ 0.01
NR1H3-230ENST00000527949 ZNF831Q5JPB2 1677 aa15.09■□□□□ 0.01
NR1H3-230ENST00000527949 LOC102724428A0A0B4J2F2 783 aa15.09■□□□□ 0.01
NR1H3-230ENST00000527949 PHF14O94880 888 aa15.09■□□□□ 0.01
NR1H3-230ENST00000527949 SIK1P57059 783 aa15.09■□□□□ 0.01
NR1H3-230ENST00000527949 DCAF5Q96JK2 942 aa15.09■□□□□ 0.01
NR1H3-230ENST00000527949 C4BP0C0L5 1744 aa15.09■□□□□ 0.01
NR1H3-230ENST00000527949 KIF3CO14782 793 aa15.08■□□□□ 0
NR1H3-230ENST00000527949 TOMM70O94826 608 aa15.08■□□□□ 0
NR1H3-230ENST00000527949 MTHFSP49914 203 aa15.08■□□□□ 0
NR1H3-230ENST00000527949 TGFB2P61812 414 aa15.08■□□□□ 0
NR1H3-230ENST00000527949 TMOD3Q9NYL9 352 aa15.08■□□□□ 0
NR1H3-230ENST00000527949 SULT6B1Q6IMI4 303 aa15.06■□□□□ 0
NR1H3-230ENST00000527949 NLGN1Q8N2Q7 840 aa15.06■□□□□ 0
NR1H3-230ENST00000527949 GNPATO15228 680 aa15.05■□□□□ -0
NR1H3-230ENST00000527949 ZNF530Q6P9A1 599 aaPredicted RBP15.05■□□□□ -0
NR1H3-230ENST00000527949 AEBP1Q8IUX7 1158 aa15.05■□□□□ -0
NR1H3-230ENST00000527949 CICQ96RK0 1608 aaPredicted RBP15.04■□□□□ -0
NR1H3-230ENST00000527949 COL3A1P02461 1466 aaPredicted RBP15.04■□□□□ -0
NR1H3-230ENST00000527949 KDM6AO15550 1401 aaPredicted RBP15.04■□□□□ -0
NR1H3-230ENST00000527949 ADRA2BP18089 450 aa15.04■□□□□ -0
NR1H3-230ENST00000527949 ATP6V1AP38606 617 aa15.04■□□□□ -0
NR1H3-230ENST00000527949 CC2D1BQ5T0F9 858 aaKnown RBP15.04■□□□□ -0
NR1H3-230ENST00000527949 LINC00116Q8NCU8 138 aa15.04■□□□□ -0
NR1H3-230ENST00000527949 UBR3Q6ZT12 1888 aa15.03■□□□□ -0
NR1H3-230ENST00000527949 DIAPH1O60610 1272 aaKnown RBP15.03■□□□□ -0
NR1H3-230ENST00000527949 MMP10P09238 476 aa15.03■□□□□ -0
NR1H3-230ENST00000527949 C1orf141Q5JVX7 400 aa15.03■□□□□ -0
NR1H3-230ENST00000527949 TRAPPC3LQ5T215 181 aa15.03■□□□□ -0
NR1H3-230ENST00000527949 ATG3Q9NT62 314 aa15.03■□□□□ -0
NR1H3-230ENST00000527949 RTCBQ9Y3I0 505 aaKnown RBP15.03■□□□□ -0
NR1H3-230ENST00000527949 SCN11AQ9UI33 1791 aa15.03■□□□□ -0
NR1H3-230ENST00000527949 AMIGO3Q86WK7 504 aa15.02■□□□□ -0
NR1H3-230ENST00000527949 CCDC87Q9NVE4 849 aa15.02■□□□□ -0
NR1H3-230ENST00000527949 ASAP1Q9ULH1 1129 aa15.02■□□□□ -0
NR1H3-230ENST00000527949 ADAMTS7Q9UKP4 1686 aa15.01□□□□□ -0.01
NR1H3-230ENST00000527949 AKAP4Q5JQC9 854 aa15.01□□□□□ -0.01
NR1H3-230ENST00000527949 BCS1LQ9Y276 419 aa15.01□□□□□ -0.01
NR1H3-230ENST00000527949 RC3H1Q5TC82 1133 aaKnown RBP15□□□□□ -0.01
NR1H3-230ENST00000527949 C16orf71Q8IYS4 520 aaPredicted RBP15□□□□□ -0.01
NR1H3-230ENST00000527949 DNAJC5GQ8N7S2 189 aa15□□□□□ -0.01
NR1H3-230ENST00000527949 RBM46Q8TBY0 533 aaKnown RBP15□□□□□ -0.01
NR1H3-230ENST00000527949 WWC3Q9ULE0 1092 aa15□□□□□ -0.01
NR1H3-230ENST00000527949 PXDNLA1KZ92 1463 aa15□□□□□ -0.01
NR1H3-230ENST00000527949 MRC1P22897 1456 aa15□□□□□ -0.01
NR1H3-230ENST00000527949 CABP4P57796 275 aa14.99□□□□□ -0.01
NR1H3-230ENST00000527949 FSTL1Q12841 308 aa14.99□□□□□ -0.01
NR1H3-230ENST00000527949 ITPK1Q13572 414 aa14.99□□□□□ -0.01
NR1H3-230ENST00000527949 ARHGAP27Q6ZUM4 889 aa14.99□□□□□ -0.01
NR1H3-230ENST00000527949 PARP3Q9Y6F1 533 aa14.98□□□□□ -0.01
NR1H3-230ENST00000527949 C10orf71Q711Q0 1435 aa14.98□□□□□ -0.01
NR1H3-230ENST00000527949 COL5A3P25940 1745 aaPredicted RBP14.97□□□□□ -0.01
NR1H3-230ENST00000527949 KDM2BQ8NHM5 1336 aa14.97□□□□□ -0.01
NR1H3-230ENST00000527949 CNTNAP4Q9C0A0 1308 aa14.97□□□□□ -0.01
NR1H3-230ENST00000527949 FCHSD2O94868 740 aa14.97□□□□□ -0.01
NR1H3-230ENST00000527949 RFC4P35249 363 aa14.97□□□□□ -0.01
NR1H3-230ENST00000527949 CFAP53Q96M91 514 aa14.97□□□□□ -0.01
NR1H3-230ENST00000527949 A0A0G2JLW4 131 aa14.96□□□□□ -0.01
NR1H3-230ENST00000527949 SMIM5Q71RC9 77 aa14.96□□□□□ -0.01
NR1H3-230ENST00000527949 VIRMAQ69YN4 1812 aaKnown RBP14.95□□□□□ -0.02
NR1H3-230ENST00000527949 HMOX1P09601 288 aa14.95□□□□□ -0.02
NR1H3-230ENST00000527949 NFATC2IPQ8NCF5 419 aa14.95□□□□□ -0.02
NR1H3-230ENST00000527949 SLC4A9Q96Q91 983 aa14.95□□□□□ -0.02
NR1H3-230ENST00000527949 SLC52A2Q9HAB3 445 aa14.95□□□□□ -0.02
NR1H3-230ENST00000527949 PIM2Q9P1W9 311 aa14.95□□□□□ -0.02
NR1H3-230ENST00000527949 RNMTO43148 476 aaKnown RBP14.94□□□□□ -0.02
NR1H3-230ENST00000527949 RPS6KA4O75676 772 aa14.94□□□□□ -0.02
NR1H3-230ENST00000527949 DPEP1P16444 411 aa14.94□□□□□ -0.02
NR1H3-230ENST00000527949 MTHFSDQ2M296 383 aaKnown RBP14.94□□□□□ -0.02
NR1H3-230ENST00000527949 GAS2L2Q8NHY3 880 aa14.94□□□□□ -0.02
NR1H3-230ENST00000527949 ARHGEF1Q92888 912 aaKnown RBP14.94□□□□□ -0.02
NR1H3-230ENST00000527949 KLRG1Q96E93 195 aa14.94□□□□□ -0.02
NR1H3-230ENST00000527949 NMRK2Q9NPI5 230 aa14.94□□□□□ -0.02
NR1H3-230ENST00000527949 GYS1P13807 737 aa14.93□□□□□ -0.02
NR1H3-230ENST00000527949 PPP2R1AP30153 589 aa14.93□□□□□ -0.02
NR1H3-230ENST00000527949 DALRD3Q5D0E6 543 aaKnown RBP14.93□□□□□ -0.02
NR1H3-230ENST00000527949 C9orf131Q5VYM1 1079 aa14.93□□□□□ -0.02
NR1H3-230ENST00000527949 JMYQ8N9B5 988 aa14.93□□□□□ -0.02
NR1H3-230ENST00000527949 NUDCQ9Y266 331 aa14.93□□□□□ -0.02
NR1H3-230ENST00000527949 MYH14Q7Z406 1995 aaKnown RBP14.93□□□□□ -0.02
NR1H3-230ENST00000527949 KIF13BQ9NQT8 1826 aa14.92□□□□□ -0.02
NR1H3-230ENST00000527949 RBM42Q9BTD8 480 aaKnown RBP14.92□□□□□ -0.02
NR1H3-230ENST00000527949 ZC3H4Q9UPT8 1303 aaKnown RBP14.92□□□□□ -0.02
NR1H3-230ENST00000527949 U2SURPO15042 1029 aaKnown RBP14.91□□□□□ -0.02
NR1H3-230ENST00000527949 VSIG10Q8N0Z9 540 aa14.91□□□□□ -0.02
NR1H3-230ENST00000527949 LGR6Q9HBX8 967 aa14.91□□□□□ -0.02
NR1H3-230ENST00000527949 TJP1Q07157 1748 aa14.91□□□□□ -0.02
NR1H3-230ENST00000527949 RSPH6AQ9H0K4 717 aa14.9□□□□□ -0.02
NR1H3-230ENST00000527949 C4AP0C0L4 1744 aa14.89□□□□□ -0.03
NR1H3-230ENST00000527949 CEMIPQ8WUJ3 1361 aa14.89□□□□□ -0.03
NR1H3-230ENST00000527949 UBR2Q8IWV8 1755 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms