RNA–Protein interactions for RNA: ENST00000527947.5

RAE1-209, Transcript of ribonucleic acid export 1, humanhuman

TSL 1 (best) BASIC

Gene RAE1, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-209ENST00000527947 ZNF530Q6P9A1 599 aaPredicted RBP16.14■□□□□ 0.18
RAE1-209ENST00000527947 DCAF5Q96JK2 942 aa16.14■□□□□ 0.18
RAE1-209ENST00000527947 TAF1LQ8IZX4 1826 aa16.14■□□□□ 0.17
RAE1-209ENST00000527947 ZNF316A6NFI3 1004 aaPredicted RBP16.14■□□□□ 0.17
RAE1-209ENST00000527947 ERVV-2B6SEH9 535 aa16.14■□□□□ 0.17
RAE1-209ENST00000527947 U2SURPO15042 1029 aaKnown RBP16.14■□□□□ 0.17
RAE1-209ENST00000527947 AK7Q96M32 723 aa16.14■□□□□ 0.17
RAE1-209ENST00000527947 ASAP1Q9ULH1 1129 aa16.14■□□□□ 0.17
RAE1-209ENST00000527947 KDM6AO15550 1401 aaPredicted RBP16.13■□□□□ 0.17
RAE1-209ENST00000527947 C1orf141Q5JVX7 400 aa16.13■□□□□ 0.17
RAE1-209ENST00000527947 ATG3Q9NT62 314 aa16.13■□□□□ 0.17
RAE1-209ENST00000527947 LINC00116Q8NCU8 138 aa16.12■□□□□ 0.17
RAE1-209ENST00000527947 AKAP4Q5JQC9 854 aa16.11■□□□□ 0.17
RAE1-209ENST00000527947 ITPK1Q13572 414 aa16.1■□□□□ 0.17
RAE1-209ENST00000527947 FCHSD2O94868 740 aa16.09■□□□□ 0.17
RAE1-209ENST00000527947 SSFA2P28290 1259 aa16.09■□□□□ 0.17
RAE1-209ENST00000527947 ATP6V1AP38606 617 aa16.09■□□□□ 0.17
RAE1-209ENST00000527947 MSL1Q68DK7 614 aa16.09■□□□□ 0.17
RAE1-209ENST00000527947 AMIGO3Q86WK7 504 aa16.09■□□□□ 0.17
RAE1-209ENST00000527947 KLHL34Q8N239 644 aa16.09■□□□□ 0.17
RAE1-209ENST00000527947 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.09■□□□□ 0.17
RAE1-209ENST00000527947 U2AF1L5P0DN76 240 aaPredicted RBP16.09■□□□□ 0.17
RAE1-209ENST00000527947 U2AF1Q01081 240 aaKnown RBP eCLIP16.09■□□□□ 0.17
RAE1-209ENST00000527947 MTHFSDQ2M296 383 aaKnown RBP16.09■□□□□ 0.17
RAE1-209ENST00000527947 MYBBP1AQ9BQG0 1328 aaKnown RBP16.08■□□□□ 0.17
RAE1-209ENST00000527947 ZNF831Q5JPB2 1677 aa16.08■□□□□ 0.17
RAE1-209ENST00000527947 CABP4P57796 275 aa16.08■□□□□ 0.16
RAE1-209ENST00000527947 RSPH6AQ9H0K4 717 aa16.08■□□□□ 0.16
RAE1-209ENST00000527947 UBR3Q6ZT12 1888 aa16.07■□□□□ 0.16
RAE1-209ENST00000527947 PHF14O94880 888 aa16.07■□□□□ 0.16
RAE1-209ENST00000527947 GNPATO15228 680 aa16.06■□□□□ 0.16
RAE1-209ENST00000527947 NLGN2Q8NFZ4 835 aa16.06■□□□□ 0.16
RAE1-209ENST00000527947 GAS2L2Q8NHY3 880 aa16.06■□□□□ 0.16
RAE1-209ENST00000527947 SLC4A9Q96Q91 983 aa16.06■□□□□ 0.16
RAE1-209ENST00000527947 PRKAR2BP31323 418 aa16.05■□□□□ 0.16
RAE1-209ENST00000527947 SMIM5Q71RC9 77 aa16.05■□□□□ 0.16
RAE1-209ENST00000527947 PRKRIP1Q9H875 184 aaPredicted RBP16.05■□□□□ 0.16
RAE1-209ENST00000527947 GPR162Q16538 588 aa16.04■□□□□ 0.16
RAE1-209ENST00000527947 RBM42Q9BTD8 480 aaKnown RBP16.04■□□□□ 0.16
RAE1-209ENST00000527947 RNMTO43148 476 aaKnown RBP16.04■□□□□ 0.16
RAE1-209ENST00000527947 NFATC2IPQ8NCF5 419 aa16.04■□□□□ 0.16
RAE1-209ENST00000527947 CD2APQ9Y5K6 639 aa16.04■□□□□ 0.16
RAE1-209ENST00000527947 CNTNAP4Q9C0A0 1308 aa16.03■□□□□ 0.16
RAE1-209ENST00000527947 SCN11AQ9UI33 1791 aa16.03■□□□□ 0.16
RAE1-209ENST00000527947 RC3H1Q5TC82 1133 aaKnown RBP16.03■□□□□ 0.16
RAE1-209ENST00000527947 PHACTR3Q96KR7 559 aa16.03■□□□□ 0.16
RAE1-209ENST00000527947 PNNQ9H307 717 aaKnown RBP16.03■□□□□ 0.16
RAE1-209ENST00000527947 LGR6Q9HBX8 967 aa16.03■□□□□ 0.16
RAE1-209ENST00000527947 MRC1P22897 1456 aa16.02■□□□□ 0.16
RAE1-209ENST00000527947 GNAT3A8MTJ3 354 aa16.02■□□□□ 0.15
RAE1-209ENST00000527947 SLC52A2Q9HAB3 445 aa16.02■□□□□ 0.15
RAE1-209ENST00000527947 COL5A3P25940 1745 aaPredicted RBP16.02■□□□□ 0.15
RAE1-209ENST00000527947 ADAMTS7Q9UKP4 1686 aa16.01■□□□□ 0.15
RAE1-209ENST00000527947 RTCBQ9Y3I0 505 aaKnown RBP16.01■□□□□ 0.15
RAE1-209ENST00000527947 CICQ96RK0 1608 aaPredicted RBP16.01■□□□□ 0.15
RAE1-209ENST00000527947 NEFMP07197 916 aa16■□□□□ 0.15
RAE1-209ENST00000527947 ADRA2BP18089 450 aa16■□□□□ 0.15
RAE1-209ENST00000527947 PELP1Q8IZL8 1130 aaKnown RBP16■□□□□ 0.15
RAE1-209ENST00000527947 PTCD1O75127 700 aaKnown RBP15.99■□□□□ 0.15
RAE1-209ENST00000527947 TRAPPC3LQ5T215 181 aa15.99■□□□□ 0.15
RAE1-209ENST00000527947 HTATSF1O43719 755 aaKnown RBP15.99■□□□□ 0.15
RAE1-209ENST00000527947 RPS6KA4O75676 772 aa15.99■□□□□ 0.15
RAE1-209ENST00000527947 IL17REQ8NFR9 667 aa15.99■□□□□ 0.15
RAE1-209ENST00000527947 PLEKHF1Q96S99 279 aa15.99■□□□□ 0.15
RAE1-209ENST00000527947 YBX3P16989 372 aaKnown RBP eCLIP15.98■□□□□ 0.154e-6■■□□□ 13.4
RAE1-209ENST00000527947 ZNF784Q8NCA9 323 aaPredicted RBP15.98■□□□□ 0.15
RAE1-209ENST00000527947 TJP1Q07157 1748 aa15.97■□□□□ 0.15
RAE1-209ENST00000527947 GRIN3BO60391 1043 aa15.97■□□□□ 0.15
RAE1-209ENST00000527947 ARHGEF1Q92888 912 aaKnown RBP15.97■□□□□ 0.15
RAE1-209ENST00000527947 CEMIPQ8WUJ3 1361 aa15.96■□□□□ 0.15
RAE1-209ENST00000527947 CRKLP46109 303 aaKnown RBP15.96■□□□□ 0.15
RAE1-209ENST00000527947 NLGN1Q8N2Q7 840 aa15.96■□□□□ 0.15
RAE1-209ENST00000527947 VIRMAQ69YN4 1812 aaKnown RBP15.96■□□□□ 0.15
RAE1-209ENST00000527947 MMP10P09238 476 aa15.95■□□□□ 0.14
RAE1-209ENST00000527947 RFC4P35249 363 aa15.95■□□□□ 0.14
RAE1-209ENST00000527947 TEFQ10587 303 aa15.95■□□□□ 0.14
RAE1-209ENST00000527947 RTF1Q92541 710 aaKnown RBP15.95■□□□□ 0.14
RAE1-209ENST00000527947 KCPQ6ZWJ8 1503 aa15.94■□□□□ 0.14
RAE1-209ENST00000527947 MAPK8IP3Q9UPT6 1336 aa15.94■□□□□ 0.14
RAE1-209ENST00000527947 CHD4Q14839 1912 aa15.94■□□□□ 0.14
RAE1-209ENST00000527947 GYS1P13807 737 aa15.94■□□□□ 0.14
RAE1-209ENST00000527947 WDR43Q15061 677 aaKnown RBP eCLIP15.94■□□□□ 0.14
RAE1-209ENST00000527947 ANP32CO43423 234 aa15.93■□□□□ 0.14
RAE1-209ENST00000527947 NFE2L2Q16236 605 aa15.93■□□□□ 0.14
RAE1-209ENST00000527947 INTS5Q6P9B9 1019 aaKnown RBP15.93■□□□□ 0.14
RAE1-209ENST00000527947 DNAJC10Q8IXB1 793 aa15.93■□□□□ 0.14
RAE1-209ENST00000527947 C4AP0C0L4 1744 aa15.92■□□□□ 0.14
RAE1-209ENST00000527947 SLC39A6Q13433 755 aa15.92■□□□□ 0.14
RAE1-209ENST00000527947 C10orf71Q711Q0 1435 aa15.92■□□□□ 0.14
RAE1-209ENST00000527947 CCDC87Q9NVE4 849 aa15.92■□□□□ 0.14
RAE1-209ENST00000527947 USP42Q9H9J4 1324 aaKnown RBP15.91■□□□□ 0.14
RAE1-209ENST00000527947 VSIG10Q8N0Z9 540 aa15.91■□□□□ 0.14
RAE1-209ENST00000527947 MYH14Q7Z406 1995 aaKnown RBP15.91■□□□□ 0.14
RAE1-209ENST00000527947 SIPA1L3O60292 1781 aaPredicted RBP15.9■□□□□ 0.14
RAE1-209ENST00000527947 CYP19A1P11511 503 aaPredicted RBP15.9■□□□□ 0.14
RAE1-209ENST00000527947 TTC5Q8N0Z6 440 aa15.9■□□□□ 0.14
RAE1-209ENST00000527947 ADAMTS8Q9UP79 889 aa15.9■□□□□ 0.14
RAE1-209ENST00000527947 PXDNLA1KZ92 1463 aa15.9■□□□□ 0.14
RAE1-209ENST00000527947 SOS1Q07889 1333 aaPredicted RBP15.9■□□□□ 0.14
RAE1-209ENST00000527947 ZNF790Q6PG37 636 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms