RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 ZNF831Q5JPB2 1677 aa44.4■■■■■ 4.7
SSSCA1-205ENST00000527920 ATP6V1AP38606 617 aa44.39■■■■■ 4.7
SSSCA1-205ENST00000527920 MTHFSDQ2M296 383 aaKnown RBP44.39■■■■■ 4.7
SSSCA1-205ENST00000527920 LINC00116Q8NCU8 138 aa44.39■■■■■ 4.7
SSSCA1-205ENST00000527920 ARXQ96QS3 562 aa44.39■■■■■ 4.7
SSSCA1-205ENST00000527920 ITPK1Q13572 414 aa44.38■■■■■ 4.7
SSSCA1-205ENST00000527920 SCN11AQ9UI33 1791 aa44.38■■■■■ 4.69
SSSCA1-205ENST00000527920 NFATC2IPQ8NCF5 419 aa44.36■■■■■ 4.69
SSSCA1-205ENST00000527920 NUDCQ9Y266 331 aa44.36■■■■■ 4.69
SSSCA1-205ENST00000527920 MRC1P22897 1456 aa44.35■■■■■ 4.69
SSSCA1-205ENST00000527920 MAP3K5Q99683 1374 aa44.35■■■■■ 4.69
SSSCA1-205ENST00000527920 POLD1P28340 1107 aa44.35■■■■■ 4.69
SSSCA1-205ENST00000527920 ADAMTS7Q9UKP4 1686 aa44.32■■■■■ 4.69
SSSCA1-205ENST00000527920 MSH5O43196 834 aa44.32■■■■■ 4.69
SSSCA1-205ENST00000527920 FHDC1Q9C0D6 1143 aaPredicted RBP44.32■■■■■ 4.69
SSSCA1-205ENST00000527920 SLC52A2Q9HAB3 445 aa44.32■■■■■ 4.69
SSSCA1-205ENST00000527920 RNMTO43148 476 aaKnown RBP44.31■■■■■ 4.68
SSSCA1-205ENST00000527920 SSFA2P28290 1259 aa44.31■■■■■ 4.68
SSSCA1-205ENST00000527920 SLC4A9Q96Q91 983 aa44.31■■■■■ 4.68
SSSCA1-205ENST00000527920 UBR3Q6ZT12 1888 aa44.3■■■■■ 4.68
SSSCA1-205ENST00000527920 RBM42Q9BTD8 480 aaKnown RBP44.3■■■■■ 4.68
SSSCA1-205ENST00000527920 GAS2L2Q8NHY3 880 aa44.29■■■■■ 4.68
SSSCA1-205ENST00000527920 SYT17Q9BSW7 474 aa44.29■■■■■ 4.68
SSSCA1-205ENST00000527920 LGR6Q9HBX8 967 aa44.29■■■■■ 4.68
SSSCA1-205ENST00000527920 AMIGO3Q86WK7 504 aa44.27■■■■■ 4.68
SSSCA1-205ENST00000527920 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP44.26■■■■■ 4.68
SSSCA1-205ENST00000527920 RSPH6AQ9H0K4 717 aa44.26■■■■■ 4.68
SSSCA1-205ENST00000527920 RC3H1Q5TC82 1133 aaKnown RBP44.24■■■■■ 4.67
SSSCA1-205ENST00000527920 GNPATO15228 680 aa44.23■■■■■ 4.67
SSSCA1-205ENST00000527920 CNTNAP4Q9C0A0 1308 aa44.23■■■■■ 4.67
SSSCA1-205ENST00000527920 PRKAR2BP31323 418 aa44.22■■■■■ 4.67
SSSCA1-205ENST00000527920 CICQ96RK0 1608 aaPredicted RBP44.21■■■■■ 4.67
SSSCA1-205ENST00000527920 PTCD1O75127 700 aaKnown RBP44.21■■■■■ 4.67
SSSCA1-205ENST00000527920 U2AF1L5P0DN76 240 aaPredicted RBP44.21■■■■■ 4.67
SSSCA1-205ENST00000527920 U2AF1Q01081 240 aaKnown RBP eCLIP44.21■■■■■ 4.67
SSSCA1-205ENST00000527920 DCAF8L1A6NGE4 600 aa44.2■■■■■ 4.67
SSSCA1-205ENST00000527920 FCHSD2O94868 740 aa44.2■■■■■ 4.67
SSSCA1-205ENST00000527920 PHF14O94880 888 aa44.2■■■■■ 4.67
SSSCA1-205ENST00000527920 COL5A3P25940 1745 aaPredicted RBP44.19■■■■■ 4.67
SSSCA1-205ENST00000527920 GNAT3A8MTJ3 354 aa44.19■■■■■ 4.66
SSSCA1-205ENST00000527920 PHACTR3Q96KR7 559 aa44.16■■■■■ 4.66
SSSCA1-205ENST00000527920 MSL1Q68DK7 614 aa44.15■■■■■ 4.66
SSSCA1-205ENST00000527920 RTCBQ9Y3I0 505 aaKnown RBP44.15■■■■■ 4.66
SSSCA1-205ENST00000527920 ADRA2BP18089 450 aa44.14■■■■■ 4.66
SSSCA1-205ENST00000527920 RALBP1Q15311 655 aa44.14■■■■■ 4.66
SSSCA1-205ENST00000527920 VIRMAQ69YN4 1812 aaKnown RBP44.14■■■■■ 4.66
SSSCA1-205ENST00000527920 SMIM5Q71RC9 77 aa44.13■■■■■ 4.66
SSSCA1-205ENST00000527920 DDX10Q13206 875 aaKnown RBP44.12■■■■■ 4.65
SSSCA1-205ENST00000527920 IL17REQ8NFR9 667 aa44.11■■■■■ 4.65
SSSCA1-205ENST00000527920 CEMIPQ8WUJ3 1361 aa44.1■■■■■ 4.65
SSSCA1-205ENST00000527920 RPS6KA4O75676 772 aa44.1■■■■■ 4.65
SSSCA1-205ENST00000527920 ZEB1P37275 1124 aaPredicted RBP44.1■■■■■ 4.65
SSSCA1-205ENST00000527920 TJP1Q07157 1748 aa44.09■■■■■ 4.65
SSSCA1-205ENST00000527920 TRAPPC3LQ5T215 181 aa44.08■■■■■ 4.65
SSSCA1-205ENST00000527920 KCPQ6ZWJ8 1503 aa44.08■■■■■ 4.65
SSSCA1-205ENST00000527920 TEFQ10587 303 aa44.07■■■■■ 4.65
SSSCA1-205ENST00000527920 SLC39A6Q13433 755 aa44.07■■■■■ 4.65
SSSCA1-205ENST00000527920 CRKLP46109 303 aaKnown RBP44.06■■■■■ 4.64
SSSCA1-205ENST00000527920 VSIG10Q8N0Z9 540 aa44.05■■■■■ 4.64
SSSCA1-205ENST00000527920 MYH14Q7Z406 1995 aaKnown RBP44.03■■■■■ 4.64
SSSCA1-205ENST00000527920 KLHL34Q8N239 644 aa44.01■■■■■ 4.64
SSSCA1-205ENST00000527920 ARHGEF1Q92888 912 aaKnown RBP44.01■■■■■ 4.64
SSSCA1-205ENST00000527920 UBR2Q8IWV8 1755 aa44■■■■■ 4.63
SSSCA1-205ENST00000527920 DNAJC10Q8IXB1 793 aa43.99■■■■■ 4.63
SSSCA1-205ENST00000527920 TTC5Q8N0Z6 440 aa43.99■■■■■ 4.63
SSSCA1-205ENST00000527920 CD2APQ9Y5K6 639 aa43.99■■■■■ 4.63
SSSCA1-205ENST00000527920 SIPA1L3O60292 1781 aaPredicted RBP43.98■■■■■ 4.63
SSSCA1-205ENST00000527920 HTATSF1O43719 755 aaKnown RBP43.97■■■■■ 4.63
SSSCA1-205ENST00000527920 INTS5Q6P9B9 1019 aaKnown RBP43.97■■■■■ 4.63
SSSCA1-205ENST00000527920 RFC4P35249 363 aa43.96■■■■■ 4.63
SSSCA1-205ENST00000527920 ZNF790Q6PG37 636 aa43.96■■■■■ 4.63
SSSCA1-205ENST00000527920 CYP19A1P11511 503 aaPredicted RBP43.95■■■■■ 4.63
SSSCA1-205ENST00000527920 NLGN1Q8N2Q7 840 aa43.95■■■■■ 4.63
SSSCA1-205ENST00000527920 RTF1Q92541 710 aaKnown RBP43.95■■■■■ 4.63
SSSCA1-205ENST00000527920 CCDC87Q9NVE4 849 aa43.95■■■■■ 4.63
SSSCA1-205ENST00000527920 NEFMP07197 916 aa43.93■■■■■ 4.62
SSSCA1-205ENST00000527920 NLGN2Q8NFZ4 835 aa43.93■■■■■ 4.62
SSSCA1-205ENST00000527920 MYBBP1AQ9BQG0 1328 aaKnown RBP43.93■■■■■ 4.62
SSSCA1-205ENST00000527920 PNNQ9H307 717 aaKnown RBP43.91■■■■■ 4.62
SSSCA1-205ENST00000527920 GYS1P13807 737 aa43.9■■■■■ 4.62
SSSCA1-205ENST00000527920 PLEKHF1Q96S99 279 aa43.9■■■■■ 4.62
SSSCA1-205ENST00000527920 C4AP0C0L4 1744 aa43.9■■■■■ 4.62
SSSCA1-205ENST00000527920 ZNF496Q96IT1 587 aaPredicted RBP43.89■■■■■ 4.62
SSSCA1-205ENST00000527920 HEG1Q9ULI3 1381 aa43.88■■■■■ 4.61
SSSCA1-205ENST00000527920 MMP10P09238 476 aa43.87■■■■■ 4.61
SSSCA1-205ENST00000527920 SOS1Q07889 1333 aaPredicted RBP43.87■■■■■ 4.61
SSSCA1-205ENST00000527920 USP42Q9H9J4 1324 aaKnown RBP43.86■■■■■ 4.61
SSSCA1-205ENST00000527920 BTBD11A6QL63 1104 aa43.85■■■■■ 4.61
SSSCA1-205ENST00000527920 MCM10Q7L590 875 aa43.85■■■■■ 4.61
SSSCA1-205ENST00000527920 FMNL2Q96PY5 1086 aa43.85■■■■■ 4.61
SSSCA1-205ENST00000527920 TEX13AQ9BXU3 409 aaPredicted RBP43.85■■■■■ 4.61
SSSCA1-205ENST00000527920 UTRNP46939 3433 aa43.84■■■■■ 4.61
SSSCA1-205ENST00000527920 STARD3NLO95772 234 aa43.84■■■■■ 4.61
SSSCA1-205ENST00000527920 GPR162Q16538 588 aa43.83■■■■■ 4.61
SSSCA1-205ENST00000527920 YY1P25490 414 aa43.82■■■■■ 4.61
SSSCA1-205ENST00000527920 ZBTB1Q9Y2K1 713 aa43.82■■■■■ 4.61
SSSCA1-205ENST00000527920 MAPK8IP3Q9UPT6 1336 aa43.78■■■■■ 4.6
SSSCA1-205ENST00000527920 NFE2L2Q16236 605 aa43.78■■■■■ 4.6
SSSCA1-205ENST00000527920 SRP68Q9UHB9 627 aaKnown RBP43.78■■■■■ 4.6
SSSCA1-205ENST00000527920 COL15A1P39059 1388 aa43.78■■■■■ 4.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms