RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 HMGB2P26583 209 aaKnown RBP21.71■■□□□ 1.07
CTSB-213ENST00000527215 SYT17Q9BSW7 474 aa21.71■■□□□ 1.07
CTSB-213ENST00000527215 ADAMTS7Q9UKP4 1686 aa21.71■■□□□ 1.07
CTSB-213ENST00000527215 MAP3K5Q99683 1374 aa21.71■■□□□ 1.07
CTSB-213ENST00000527215 U2SURPO15042 1029 aaKnown RBP21.69■■□□□ 1.06
CTSB-213ENST00000527215 POLD1P28340 1107 aa21.69■■□□□ 1.06
CTSB-213ENST00000527215 CABP4P57796 275 aa21.69■■□□□ 1.06
CTSB-213ENST00000527215 COL23A1Q86Y22 540 aaPredicted RBP21.69■■□□□ 1.06
CTSB-213ENST00000527215 MSH5O43196 834 aa21.68■■□□□ 1.06
CTSB-213ENST00000527215 PPP2R1AP30153 589 aa21.68■■□□□ 1.06
CTSB-213ENST00000527215 AKAP4Q5JQC9 854 aa21.68■■□□□ 1.06
CTSB-213ENST00000527215 ATP6V1AP38606 617 aa21.67■■□□□ 1.06
CTSB-213ENST00000527215 ITPK1Q13572 414 aa21.67■■□□□ 1.06
CTSB-213ENST00000527215 LINC00116Q8NCU8 138 aa21.67■■□□□ 1.06
CTSB-213ENST00000527215 AK7Q96M32 723 aa21.67■■□□□ 1.06
CTSB-213ENST00000527215 CFAP53Q96M91 514 aa21.67■■□□□ 1.06
CTSB-213ENST00000527215 TJP1Q07157 1748 aa21.66■■□□□ 1.06
CTSB-213ENST00000527215 MTHFSDQ2M296 383 aaKnown RBP21.66■■□□□ 1.06
CTSB-213ENST00000527215 CICQ96RK0 1608 aaPredicted RBP21.66■■□□□ 1.06
CTSB-213ENST00000527215 MRC1P22897 1456 aa21.65■■□□□ 1.06
CTSB-213ENST00000527215 MYH14Q7Z406 1995 aaKnown RBP21.65■■□□□ 1.06
CTSB-213ENST00000527215 NFATC2IPQ8NCF5 419 aa21.65■■□□□ 1.06
CTSB-213ENST00000527215 AMIGO3Q86WK7 504 aa21.64■■□□□ 1.05
CTSB-213ENST00000527215 FLAD1Q8NFF5 587 aa21.64■■□□□ 1.05
CTSB-213ENST00000527215 RBM42Q9BTD8 480 aaKnown RBP21.64■■□□□ 1.05
CTSB-213ENST00000527215 SIPA1L3O60292 1781 aaPredicted RBP21.64■■□□□ 1.05
CTSB-213ENST00000527215 SLC4A9Q96Q91 983 aa21.63■■□□□ 1.05
CTSB-213ENST00000527215 LGR6Q9HBX8 967 aa21.63■■□□□ 1.05
CTSB-213ENST00000527215 PHF14O94880 888 aa21.62■■□□□ 1.05
CTSB-213ENST00000527215 SMIM5Q71RC9 77 aa21.62■■□□□ 1.05
CTSB-213ENST00000527215 UBR2Q8IWV8 1755 aa21.61■■□□□ 1.05
CTSB-213ENST00000527215 RNMTO43148 476 aaKnown RBP21.61■■□□□ 1.05
CTSB-213ENST00000527215 MSL1Q68DK7 614 aa21.61■■□□□ 1.05
CTSB-213ENST00000527215 KLHL34Q8N239 644 aa21.61■■□□□ 1.05
CTSB-213ENST00000527215 C4AP0C0L4 1744 aa21.6■■□□□ 1.05
CTSB-213ENST00000527215 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.6■■□□□ 1.05
CTSB-213ENST00000527215 SLC52A2Q9HAB3 445 aa21.6■■□□□ 1.05
CTSB-213ENST00000527215 GNPATO15228 680 aa21.59■■□□□ 1.05
CTSB-213ENST00000527215 SSFA2P28290 1259 aa21.59■■□□□ 1.05
CTSB-213ENST00000527215 NUDCQ9Y266 331 aa21.59■■□□□ 1.05
CTSB-213ENST00000527215 PTCD1O75127 700 aaKnown RBP21.58■■□□□ 1.05
CTSB-213ENST00000527215 RSPH6AQ9H0K4 717 aa21.58■■□□□ 1.05
CTSB-213ENST00000527215 DLG5Q8TDM6 1919 aa21.57■■□□□ 1.04
CTSB-213ENST00000527215 PRKAR2BP31323 418 aa21.57■■□□□ 1.04
CTSB-213ENST00000527215 GAS2L2Q8NHY3 880 aa21.57■■□□□ 1.04
CTSB-213ENST00000527215 U2AF1L5P0DN76 240 aaPredicted RBP21.56■■□□□ 1.04
CTSB-213ENST00000527215 U2AF1Q01081 240 aaKnown RBP eCLIP21.56■■□□□ 1.04
CTSB-213ENST00000527215 GPR162Q16538 588 aa21.56■■□□□ 1.04
CTSB-213ENST00000527215 CNTNAP4Q9C0A0 1308 aa21.55■■□□□ 1.04
CTSB-213ENST00000527215 KCPQ6ZWJ8 1503 aa21.55■■□□□ 1.04
CTSB-213ENST00000527215 GNAT3A8MTJ3 354 aa21.54■■□□□ 1.04
CTSB-213ENST00000527215 RC3H1Q5TC82 1133 aaKnown RBP21.54■■□□□ 1.04
CTSB-213ENST00000527215 PHACTR3Q96KR7 559 aa21.54■■□□□ 1.04
CTSB-213ENST00000527215 CHD4Q14839 1912 aa21.54■■□□□ 1.04
CTSB-213ENST00000527215 DDX10Q13206 875 aaKnown RBP21.53■■□□□ 1.04
CTSB-213ENST00000527215 SLC39A6Q13433 755 aa21.53■■□□□ 1.04
CTSB-213ENST00000527215 RTCBQ9Y3I0 505 aaKnown RBP21.53■■□□□ 1.04
CTSB-213ENST00000527215 ZNF784Q8NCA9 323 aaPredicted RBP21.52■■□□□ 1.04
CTSB-213ENST00000527215 PELP1Q8IZL8 1130 aaKnown RBP21.51■■□□□ 1.03
CTSB-213ENST00000527215 IL17REQ8NFR9 667 aa21.51■■□□□ 1.03
CTSB-213ENST00000527215 RPS6KA4O75676 772 aa21.5■■□□□ 1.03
CTSB-213ENST00000527215 FCHSD2O94868 740 aa21.5■■□□□ 1.03
CTSB-213ENST00000527215 CRKLP46109 303 aaKnown RBP21.5■■□□□ 1.03
CTSB-213ENST00000527215 TRAPPC3LQ5T215 181 aa21.5■■□□□ 1.03
CTSB-213ENST00000527215 NLGN2Q8NFZ4 835 aa21.49■■□□□ 1.03
CTSB-213ENST00000527215 ADRA2BP18089 450 aa21.48■■□□□ 1.03
CTSB-213ENST00000527215 TEFQ10587 303 aa21.48■■□□□ 1.03
CTSB-213ENST00000527215 DNAJC10Q8IXB1 793 aa21.48■■□□□ 1.03
CTSB-213ENST00000527215 ARHGEF1Q92888 912 aaKnown RBP21.48■■□□□ 1.03
CTSB-213ENST00000527215 KIF13BQ9NQT8 1826 aa21.48■■□□□ 1.03
CTSB-213ENST00000527215 CEMIPQ8WUJ3 1361 aa21.48■■□□□ 1.03
CTSB-213ENST00000527215 RALBP1Q15311 655 aa21.46■■□□□ 1.03
CTSB-213ENST00000527215 UTRNP46939 3433 aa21.45■■□□□ 1.02
CTSB-213ENST00000527215 RFC4P35249 363 aa21.45■■□□□ 1.02
CTSB-213ENST00000527215 INTS5Q6P9B9 1019 aaKnown RBP21.45■■□□□ 1.02
CTSB-213ENST00000527215 TTC5Q8N0Z6 440 aa21.45■■□□□ 1.02
CTSB-213ENST00000527215 GRIN3BO60391 1043 aa21.44■■□□□ 1.02
CTSB-213ENST00000527215 CCDC87Q9NVE4 849 aa21.44■■□□□ 1.02
CTSB-213ENST00000527215 CYP19A1P11511 503 aaPredicted RBP21.43■■□□□ 1.02
CTSB-213ENST00000527215 VSIG10Q8N0Z9 540 aa21.43■■□□□ 1.02
CTSB-213ENST00000527215 CD2APQ9Y5K6 639 aa21.43■■□□□ 1.02
CTSB-213ENST00000527215 KIAA1551Q9HCM1 1747 aa21.43■■□□□ 1.02
CTSB-213ENST00000527215 MMP10P09238 476 aa21.42■■□□□ 1.02
CTSB-213ENST00000527215 GYS1P13807 737 aa21.42■■□□□ 1.02
CTSB-213ENST00000527215 ZNF790Q6PG37 636 aa21.42■■□□□ 1.02
CTSB-213ENST00000527215 N4BP2Q86UW6 1770 aaPredicted RBP21.42■■□□□ 1.02
CTSB-213ENST00000527215 MCM10Q7L590 875 aa21.41■■□□□ 1.02
CTSB-213ENST00000527215 NLGN1Q8N2Q7 840 aa21.41■■□□□ 1.02
CTSB-213ENST00000527215 RTF1Q92541 710 aaKnown RBP21.41■■□□□ 1.02
CTSB-213ENST00000527215 HEG1Q9ULI3 1381 aa21.4■■□□□ 1.02
CTSB-213ENST00000527215 GOLGB1Q14789 3259 aaKnown RBP21.4■■□□□ 1.02
CTSB-213ENST00000527215 ZEB1P37275 1124 aaPredicted RBP21.4■■□□□ 1.02
CTSB-213ENST00000527215 ZNF496Q96IT1 587 aaPredicted RBP21.4■■□□□ 1.02
CTSB-213ENST00000527215 KDM3BQ7LBC6 1761 aa21.39■■□□□ 1.01
CTSB-213ENST00000527215 SOS1Q07889 1333 aaPredicted RBP21.39■■□□□ 1.01
CTSB-213ENST00000527215 MYBBP1AQ9BQG0 1328 aaKnown RBP21.39■■□□□ 1.01
CTSB-213ENST00000527215 USP42Q9H9J4 1324 aaKnown RBP21.39■■□□□ 1.01
CTSB-213ENST00000527215 BTBD11A6QL63 1104 aa21.39■■□□□ 1.01
CTSB-213ENST00000527215 NEFMP07197 916 aa21.39■■□□□ 1.01
CTSB-213ENST00000527215 DCTN1Q14203 1278 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms