RNA–Protein interactions for RNA: ENST00000526493.1

UBASH3B-204, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 3

Gene UBASH3B, Length 1,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-204ENST00000526493 JCADQ9P266 1359 aa16.72■□□□□ 0.27
UBASH3B-204ENST00000526493 DISP2A7MBM2 1401 aa16.71■□□□□ 0.27
UBASH3B-204ENST00000526493 NUTM2BA6NNL0 878 aaPredicted RBP16.71■□□□□ 0.27
UBASH3B-204ENST00000526493 NUTM2EB1AL46 878 aaPredicted RBP16.71■□□□□ 0.27
UBASH3B-204ENST00000526493 TCERG1O14776 1098 aaKnown RBP16.71■□□□□ 0.27
UBASH3B-204ENST00000526493 TRIM27P14373 513 aa16.71■□□□□ 0.27
UBASH3B-204ENST00000526493 ATF7IPQ6VMQ6 1270 aa16.71■□□□□ 0.27
UBASH3B-204ENST00000526493 NUTM2AQ8IVF1 878 aaPredicted RBP16.71■□□□□ 0.27
UBASH3B-204ENST00000526493 ZCRB1Q8TBF4 217 aaKnown RBP16.71■□□□□ 0.27
UBASH3B-204ENST00000526493 SOS1Q07889 1333 aaPredicted RBP16.7■□□□□ 0.26
UBASH3B-204ENST00000526493 SLIT2O94813 1529 aa16.7■□□□□ 0.26
UBASH3B-204ENST00000526493 TOGARAM1Q9Y4F4 1720 aa16.7■□□□□ 0.26
UBASH3B-204ENST00000526493 IPO8O15397 1037 aaKnown RBP16.7■□□□□ 0.26
UBASH3B-204ENST00000526493 MS4A1P11836 297 aa16.7■□□□□ 0.26
UBASH3B-204ENST00000526493 DZIP1LQ8IYY4 767 aaKnown RBP16.7■□□□□ 0.26
UBASH3B-204ENST00000526493 COG6Q9Y2V7 657 aa16.7■□□□□ 0.26
UBASH3B-204ENST00000526493 BTBD11A6QL63 1104 aa16.69■□□□□ 0.26
UBASH3B-204ENST00000526493 KCNQ3O43525 872 aa16.69■□□□□ 0.26
UBASH3B-204ENST00000526493 HSP90AB1P08238 724 aaKnown RBP16.69■□□□□ 0.26
UBASH3B-204ENST00000526493 EIF4A1P60842 406 aaKnown RBP16.69■□□□□ 0.26
UBASH3B-204ENST00000526493 CNKSR2Q8WXI2 1034 aa16.69■□□□□ 0.26
UBASH3B-204ENST00000526493 ARHGAP45Q92619 1136 aa16.69■□□□□ 0.26
UBASH3B-204ENST00000526493 CLUAP1Q96AJ1 413 aa16.69■□□□□ 0.26
UBASH3B-204ENST00000526493 DCAF5Q96JK2 942 aa16.69■□□□□ 0.26
UBASH3B-204ENST00000526493 PCDH11XQ9BZA7 1347 aa16.69■□□□□ 0.26
UBASH3B-204ENST00000526493 PCDH11YQ9BZA8 1340 aa16.69■□□□□ 0.26
UBASH3B-204ENST00000526493 C5P01031 1676 aa16.69■□□□□ 0.26
UBASH3B-204ENST00000526493 ITGB4P16144 1822 aa16.68■□□□□ 0.26
UBASH3B-204ENST00000526493 PAPPAQ13219 1627 aa16.67■□□□□ 0.26
UBASH3B-204ENST00000526493 NKX1-1Q15270 411 aaPredicted RBP16.67■□□□□ 0.26
UBASH3B-204ENST00000526493 SLC52A2Q9HAB3 445 aa16.67■□□□□ 0.26
UBASH3B-204ENST00000526493 USP35Q9P2H5 1018 aa16.67■□□□□ 0.26
UBASH3B-204ENST00000526493 UBR2Q8IWV8 1755 aa16.66■□□□□ 0.26
UBASH3B-204ENST00000526493 MVPQ14764 893 aaKnown RBP16.66■□□□□ 0.26
UBASH3B-204ENST00000526493 FTSJ3Q8IY81 847 aaKnown RBP16.66■□□□□ 0.26
UBASH3B-204ENST00000526493 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.66■□□□□ 0.26
UBASH3B-204ENST00000526493 N4BP2Q86UW6 1770 aaPredicted RBP16.66■□□□□ 0.26
UBASH3B-204ENST00000526493 HEG1Q9ULI3 1381 aa16.65■□□□□ 0.26
UBASH3B-204ENST00000526493 LRP6O75581 1613 aa16.65■□□□□ 0.26
UBASH3B-204ENST00000526493 RGS12O14924 1447 aa16.64■□□□□ 0.25
UBASH3B-204ENST00000526493 HOXB7P09629 217 aa16.64■□□□□ 0.25
UBASH3B-204ENST00000526493 TMEM57Q8N5G2 664 aa16.64■□□□□ 0.25
UBASH3B-204ENST00000526493 NFATC2IPQ8NCF5 419 aa16.64■□□□□ 0.25
UBASH3B-204ENST00000526493 ABCC4O15439 1325 aa16.64■□□□□ 0.25
UBASH3B-204ENST00000526493 SPATA31A1Q5TZJ5 1347 aa16.64■□□□□ 0.25
UBASH3B-204ENST00000526493 SPATA31A6Q5VVP1 1343 aa16.64■□□□□ 0.25
UBASH3B-204ENST00000526493 GLI3P10071 1580 aa16.64■□□□□ 0.25
UBASH3B-204ENST00000526493 AAMPQ13685 434 aa16.63■□□□□ 0.25
UBASH3B-204ENST00000526493 CCDC30Q5VVM6 783 aa16.63■□□□□ 0.25
UBASH3B-204ENST00000526493 API5Q9BZZ5 524 aaKnown RBP16.63■□□□□ 0.25
UBASH3B-204ENST00000526493 LAMB4A4D0S4 1761 aa16.63■□□□□ 0.25
UBASH3B-204ENST00000526493 SLC4A2P04920 1241 aa16.62■□□□□ 0.25
UBASH3B-204ENST00000526493 HSPA1LP34931 641 aa16.62■□□□□ 0.25
UBASH3B-204ENST00000526493 G2E3Q7L622 706 aa16.62■□□□□ 0.25
UBASH3B-204ENST00000526493 DDX54Q8TDD1 881 aaKnown RBP16.62■□□□□ 0.25
UBASH3B-204ENST00000526493 SPATA31A5Q5VU36 1347 aa16.62■□□□□ 0.25
UBASH3B-204ENST00000526493 SPATA31A7Q8IWB4 1347 aa16.62■□□□□ 0.25
UBASH3B-204ENST00000526493 BCL9LQ86UU0 1499 aa16.61■□□□□ 0.25
UBASH3B-204ENST00000526493 ERVV-2B6SEH9 535 aa16.61■□□□□ 0.25
UBASH3B-204ENST00000526493 CABP4P57796 275 aa16.61■□□□□ 0.25
UBASH3B-204ENST00000526493 SLC39A6Q13433 755 aa16.61■□□□□ 0.25
UBASH3B-204ENST00000526493 ZNF790Q6PG37 636 aa16.61■□□□□ 0.25
UBASH3B-204ENST00000526493 THRAP3Q9Y2W1 955 aaKnown RBP16.61■□□□□ 0.25
UBASH3B-204ENST00000526493 PTPRCP08575 1304 aa16.61■□□□□ 0.25
UBASH3B-204ENST00000526493 TNS2Q63HR2 1409 aa16.61■□□□□ 0.25
UBASH3B-204ENST00000526493 GIGYF1O75420 1035 aaPredicted RBP16.6■□□□□ 0.25
UBASH3B-204ENST00000526493 HDGFL1Q5TGJ6 251 aa16.6■□□□□ 0.25
UBASH3B-204ENST00000526493 ITPRIPQ8IWB1 547 aa16.6■□□□□ 0.25
UBASH3B-204ENST00000526493 NECTIN2Q92692 538 aa16.6■□□□□ 0.25
UBASH3B-204ENST00000526493 STK31Q9BXU1 1019 aa16.6■□□□□ 0.25
UBASH3B-204ENST00000526493 DDX19BQ9UMR2 479 aa16.6■□□□□ 0.25
UBASH3B-204ENST00000526493 KDM2BQ8NHM5 1336 aa16.6■□□□□ 0.25
UBASH3B-204ENST00000526493 KAT6BQ8WYB5 2073 aa16.6■□□□□ 0.25
UBASH3B-204ENST00000526493 DOT1LQ8TEK3 1739 aa16.59■□□□□ 0.25
UBASH3B-204ENST00000526493 ILDR1Q86SU0 546 aaPredicted RBP16.59■□□□□ 0.25
UBASH3B-204ENST00000526493 UNC5CLQ8IV45 518 aa16.59■□□□□ 0.25
UBASH3B-204ENST00000526493 C8orf37Q96NL8 207 aa16.59■□□□□ 0.25
UBASH3B-204ENST00000526493 CDCA7Q9BWT1 371 aaPredicted RBP16.59■□□□□ 0.25
UBASH3B-204ENST00000526493 PELP1Q8IZL8 1130 aaKnown RBP16.58■□□□□ 0.24
UBASH3B-204ENST00000526493 FNBP4Q8N3X1 1017 aaPredicted RBP16.58■□□□□ 0.24
UBASH3B-204ENST00000526493 NGLY1Q96IV0 654 aa16.58■□□□□ 0.24
UBASH3B-204ENST00000526493 KCPQ6ZWJ8 1503 aa16.57■□□□□ 0.24
UBASH3B-204ENST00000526493 EIF2S2P20042 333 aaKnown RBP16.57■□□□□ 0.24
UBASH3B-204ENST00000526493 CHMP4AQ9BY43 222 aa16.57■□□□□ 0.24
UBASH3B-204ENST00000526493 RNF216Q9NWF9 866 aaPredicted RBP16.57■□□□□ 0.24
UBASH3B-204ENST00000526493 PCDHB15Q9Y5E8 787 aa16.57■□□□□ 0.24
UBASH3B-204ENST00000526493 PRAMEF22A3QJZ6 481 aa16.56■□□□□ 0.24
UBASH3B-204ENST00000526493 DCAF8L1A6NGE4 600 aa16.56■□□□□ 0.24
UBASH3B-204ENST00000526493 EXOC5O00471 708 aa16.56■□□□□ 0.24
UBASH3B-204ENST00000526493 FLIIQ13045 1269 aa16.56■□□□□ 0.24
UBASH3B-204ENST00000526493 VPS72Q15906 364 aa16.56■□□□□ 0.24
UBASH3B-204ENST00000526493 INTS3Q68E01 1043 aaKnown RBP16.56■□□□□ 0.24
UBASH3B-204ENST00000526493 BARGINQ6ZT62 677 aa16.56■□□□□ 0.24
UBASH3B-204ENST00000526493 ZNF496Q96IT1 587 aaPredicted RBP16.56■□□□□ 0.24
UBASH3B-204ENST00000526493 ZBTB40Q9NUA8 1239 aa16.56■□□□□ 0.24
UBASH3B-204ENST00000526493 ZBTB7BO15156 539 aaPredicted RBP16.55■□□□□ 0.24
UBASH3B-204ENST00000526493 CENPQQ7L2Z9 268 aaPredicted RBP16.55■□□□□ 0.24
UBASH3B-204ENST00000526493 CHPF2Q9P2E5 772 aa16.55■□□□□ 0.24
UBASH3B-204ENST00000526493 IGHDP01880 384 aa16.54■□□□□ 0.24
UBASH3B-204ENST00000526493 TTC5Q8N0Z6 440 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms