RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 SIK1P57059 783 aa16.17■□□□□ 0.18
CAPN1-204ENST00000526468 NKX1-1Q15270 411 aaPredicted RBP16.17■□□□□ 0.18
CAPN1-204ENST00000526468 WWC3Q9ULE0 1092 aa16.17■□□□□ 0.18
CAPN1-204ENST00000526468 IGSF1Q8N6C5 1336 aa16.17■□□□□ 0.18
CAPN1-204ENST00000526468 ADCY9O60503 1353 aa16.16■□□□□ 0.18
CAPN1-204ENST00000526468 GNPATO15228 680 aa16.16■□□□□ 0.18
CAPN1-204ENST00000526468 PHKG2P15735 406 aa16.16■□□□□ 0.18
CAPN1-204ENST00000526468 SMIM5Q71RC9 77 aa16.16■□□□□ 0.18
CAPN1-204ENST00000526468 POLKQ9UBT6 870 aa16.16■□□□□ 0.18
CAPN1-204ENST00000526468 EIF4A2Q14240 407 aaKnown RBP16.15■□□□□ 0.18
CAPN1-204ENST00000526468 IFNL2Q8IZJ0 200 aa16.15■□□□□ 0.18
CAPN1-204ENST00000526468 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.15■□□□□ 0.18
CAPN1-204ENST00000526468 KDM6AO15550 1401 aaPredicted RBP16.14■□□□□ 0.17
CAPN1-204ENST00000526468 ATP6V1AP38606 617 aa16.14■□□□□ 0.17
CAPN1-204ENST00000526468 ASAP1Q9ULH1 1129 aa16.14■□□□□ 0.17
CAPN1-204ENST00000526468 TIMELESSQ9UNS1 1208 aa16.14■□□□□ 0.17
CAPN1-204ENST00000526468 AFDNP55196 1824 aaKnown RBP16.14■□□□□ 0.17
CAPN1-204ENST00000526468 ITPK1Q13572 414 aa16.13■□□□□ 0.17
CAPN1-204ENST00000526468 PXDNLA1KZ92 1463 aa16.13■□□□□ 0.17
CAPN1-204ENST00000526468 CLSPNQ9HAW4 1339 aa16.13■□□□□ 0.17
CAPN1-204ENST00000526468 DLEC1Q9Y238 1755 aa16.13■□□□□ 0.17
CAPN1-204ENST00000526468 SBF1O95248 1867 aa16.12■□□□□ 0.17
CAPN1-204ENST00000526468 CCDC88AQ3V6T2 1871 aa16.12■□□□□ 0.17
CAPN1-204ENST00000526468 ADAMTS7Q9UKP4 1686 aa16.11■□□□□ 0.17
CAPN1-204ENST00000526468 C10orf71Q711Q0 1435 aa16.11■□□□□ 0.17
CAPN1-204ENST00000526468 UBR2Q8IWV8 1755 aa16.11■□□□□ 0.17
CAPN1-204ENST00000526468 CEP350Q5VT06 3117 aa16.11■□□□□ 0.17
CAPN1-204ENST00000526468 ZNF526Q8TF50 670 aaPredicted RBP16.1■□□□□ 0.17
CAPN1-204ENST00000526468 GPBP1L1Q9HC44 474 aaPredicted RBP16.1■□□□□ 0.17
CAPN1-204ENST00000526468 ATG3Q9NT62 314 aa16.1■□□□□ 0.17
CAPN1-204ENST00000526468 CACNA1SQ13698 1873 aa16.1■□□□□ 0.17
CAPN1-204ENST00000526468 ZNF530Q6P9A1 599 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-204ENST00000526468 RBM42Q9BTD8 480 aaKnown RBP16.09■□□□□ 0.17
CAPN1-204ENST00000526468 HSP90AB1P08238 724 aaKnown RBP16.08■□□□□ 0.16
CAPN1-204ENST00000526468 MMP10P09238 476 aa16.08■□□□□ 0.16
CAPN1-204ENST00000526468 HSPA5P11021 654 aaKnown RBP16.08■□□□□ 0.16
CAPN1-204ENST00000526468 EIF4G2P78344 907 aaKnown RBP eCLIP16.08■□□□□ 0.16
CAPN1-204ENST00000526468 TNRC6CQ9HCJ0 1690 aaKnown RBP16.08■□□□□ 0.16
CAPN1-204ENST00000526468 TIAM2Q8IVF5 1701 aa16.08■□□□□ 0.16
CAPN1-204ENST00000526468 RTCBQ9Y3I0 505 aaKnown RBP16.07■□□□□ 0.16
CAPN1-204ENST00000526468 MRC1P22897 1456 aa16.07■□□□□ 0.16
CAPN1-204ENST00000526468 SIPA1L3O60292 1781 aaPredicted RBP16.06■□□□□ 0.16
CAPN1-204ENST00000526468 CNTNAP4Q9C0A0 1308 aa16.06■□□□□ 0.16
CAPN1-204ENST00000526468 PLEKHO1Q53GL0 409 aaPredicted RBP16.06■□□□□ 0.16
CAPN1-204ENST00000526468 DCAF5Q96JK2 942 aa16.06■□□□□ 0.16
CAPN1-204ENST00000526468 PANK3Q9H999 370 aa16.06■□□□□ 0.16
CAPN1-204ENST00000526468 WDR90Q96KV7 1748 aa16.05■□□□□ 0.16
CAPN1-204ENST00000526468 ERVV-2B6SEH9 535 aa16.05■□□□□ 0.16
CAPN1-204ENST00000526468 C1orf141Q5JVX7 400 aa16.05■□□□□ 0.16
CAPN1-204ENST00000526468 AEBP1Q8IUX7 1158 aa16.05■□□□□ 0.16
CAPN1-204ENST00000526468 SCN7AQ01118 1682 aa16.05■□□□□ 0.16
CAPN1-204ENST00000526468 CABP4P57796 275 aa16.04■□□□□ 0.16
CAPN1-204ENST00000526468 MORC1Q86VD1 984 aa16.04■□□□□ 0.16
CAPN1-204ENST00000526468 NRXN2Q9P2S2 1712 aa16.03■□□□□ 0.16
CAPN1-204ENST00000526468 ADRA2BP18089 450 aa16.03■□□□□ 0.16
CAPN1-204ENST00000526468 AMOTQ4VCS5 1084 aa16.03■□□□□ 0.16
CAPN1-204ENST00000526468 TRAPPC3LQ5T215 181 aa16.03■□□□□ 0.16
CAPN1-204ENST00000526468 SLC4A9Q96Q91 983 aa16.03■□□□□ 0.16
CAPN1-204ENST00000526468 RFC4P35249 363 aa16.01■□□□□ 0.15
CAPN1-204ENST00000526468 MTHFSP49914 203 aa16.01■□□□□ 0.15
CAPN1-204ENST00000526468 CCDC87Q9NVE4 849 aa16.01■□□□□ 0.15
CAPN1-204ENST00000526468 BCS1LQ9Y276 419 aa16.01■□□□□ 0.15
CAPN1-204ENST00000526468 KCPQ6ZWJ8 1503 aa16■□□□□ 0.15
CAPN1-204ENST00000526468 ANKRD31Q8N7Z5 1873 aa16■□□□□ 0.15
CAPN1-204ENST00000526468 PTCD1O75127 700 aaKnown RBP16■□□□□ 0.15
CAPN1-204ENST00000526468 SULT6B1Q6IMI4 303 aa16■□□□□ 0.15
CAPN1-204ENST00000526468 NLGN1Q8N2Q7 840 aa16■□□□□ 0.15
CAPN1-204ENST00000526468 ARHGEF1Q92888 912 aaKnown RBP16■□□□□ 0.15
CAPN1-204ENST00000526468 BCORQ6W2J9 1755 aa16■□□□□ 0.15
CAPN1-204ENST00000526468 COL11A2P13942 1736 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-204ENST00000526468 GYS1P13807 737 aa15.99■□□□□ 0.15
CAPN1-204ENST00000526468 RC3H1Q5TC82 1133 aaKnown RBP15.99■□□□□ 0.15
CAPN1-204ENST00000526468 KNSTRNQ9Y448 316 aa15.99■□□□□ 0.15
CAPN1-204ENST00000526468 PARP3Q9Y6F1 533 aa15.99■□□□□ 0.15
CAPN1-204ENST00000526468 DICER1Q9UPY3 1922 aaKnown RBP15.99■□□□□ 0.15
CAPN1-204ENST00000526468 RPS6KA4O75676 772 aa15.98■□□□□ 0.15
CAPN1-204ENST00000526468 CRKLP46109 303 aaKnown RBP15.98■□□□□ 0.15
CAPN1-204ENST00000526468 USP42Q9H9J4 1324 aaKnown RBP15.97■□□□□ 0.15
CAPN1-204ENST00000526468 A0A0G2JLW4 131 aa15.97■□□□□ 0.15
CAPN1-204ENST00000526468 HSPA6P17066 643 aa15.97■□□□□ 0.15
CAPN1-204ENST00000526468 TGFB2P61812 414 aa15.97■□□□□ 0.15
CAPN1-204ENST00000526468 CCER1Q8TC90 406 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-204ENST00000526468 ARFGEF2Q9Y6D5 1785 aa15.97■□□□□ 0.15
CAPN1-204ENST00000526468 FCHSD2O94868 740 aa15.96■□□□□ 0.15
CAPN1-204ENST00000526468 DPEP1P16444 411 aa15.96■□□□□ 0.15
CAPN1-204ENST00000526468 NFATC2IPQ8NCF5 419 aa15.96■□□□□ 0.15
CAPN1-204ENST00000526468 SRP68Q9UHB9 627 aaKnown RBP15.96■□□□□ 0.15
CAPN1-204ENST00000526468 KIF3CO14782 793 aa15.94■□□□□ 0.14
CAPN1-204ENST00000526468 IL13P35225 146 aa15.94■□□□□ 0.14
CAPN1-204ENST00000526468 COL3A1P02461 1466 aaPredicted RBP15.94■□□□□ 0.14
CAPN1-204ENST00000526468 COL15A1P39059 1388 aa15.93■□□□□ 0.14
CAPN1-204ENST00000526468 DDR1Q08345 913 aa15.93■□□□□ 0.14
CAPN1-204ENST00000526468 AKAP4Q5JQC9 854 aa15.93■□□□□ 0.14
CAPN1-204ENST00000526468 ARHGAP27Q6ZUM4 889 aa15.93■□□□□ 0.14
CAPN1-204ENST00000526468 FER1L6Q2WGJ9 1857 aa15.93■□□□□ 0.14
CAPN1-204ENST00000526468 KIF7Q2M1P5 1343 aa15.93■□□□□ 0.14
CAPN1-204ENST00000526468 HMOX1P09601 288 aa15.92■□□□□ 0.14
CAPN1-204ENST00000526468 FKBP8Q14318 412 aa15.92■□□□□ 0.14
CAPN1-204ENST00000526468 AMER1Q5JTC6 1135 aaPredicted RBP15.92■□□□□ 0.14
CAPN1-204ENST00000526468 SLC52A2Q9HAB3 445 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms