RNA–Protein interactions for RNA: ENST00000526232.1

CPNE7-204, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-204ENST00000526232 ATP6V1AP38606 617 aa24.28■■□□□ 1.48
CPNE7-204ENST00000526232 COL23A1Q86Y22 540 aaPredicted RBP24.28■■□□□ 1.48
CPNE7-204ENST00000526232 PPP2R1AP30153 589 aa24.27■■□□□ 1.48
CPNE7-204ENST00000526232 LINC00116Q8NCU8 138 aa24.26■■□□□ 1.47
CPNE7-204ENST00000526232 FHDC1Q9C0D6 1143 aaPredicted RBP24.26■■□□□ 1.47
CPNE7-204ENST00000526232 ITPK1Q13572 414 aa24.25■■□□□ 1.47
CPNE7-204ENST00000526232 MTHFSDQ2M296 383 aaKnown RBP24.25■■□□□ 1.47
CPNE7-204ENST00000526232 COL24A1Q17RW2 1714 aa24.24■■□□□ 1.47
CPNE7-204ENST00000526232 DCAF8L1A6NGE4 600 aa24.24■■□□□ 1.47
CPNE7-204ENST00000526232 NFATC2IPQ8NCF5 419 aa24.24■■□□□ 1.47
CPNE7-204ENST00000526232 RBM42Q9BTD8 480 aaKnown RBP24.24■■□□□ 1.47
CPNE7-204ENST00000526232 NUDCQ9Y266 331 aa24.24■■□□□ 1.47
CPNE7-204ENST00000526232 MRC1P22897 1456 aa24.24■■□□□ 1.47
CPNE7-204ENST00000526232 ZNF831Q5JPB2 1677 aa24.24■■□□□ 1.47
CPNE7-204ENST00000526232 SCN11AQ9UI33 1791 aa24.24■■□□□ 1.47
CPNE7-204ENST00000526232 MAP3K5Q99683 1374 aa24.23■■□□□ 1.47
CPNE7-204ENST00000526232 PHF14O94880 888 aa24.22■■□□□ 1.47
CPNE7-204ENST00000526232 SSFA2P28290 1259 aa24.22■■□□□ 1.47
CPNE7-204ENST00000526232 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.21■■□□□ 1.47
CPNE7-204ENST00000526232 GNPATO15228 680 aa24.21■■□□□ 1.47
CPNE7-204ENST00000526232 GAS2L2Q8NHY3 880 aa24.21■■□□□ 1.47
CPNE7-204ENST00000526232 SYT17Q9BSW7 474 aa24.21■■□□□ 1.47
CPNE7-204ENST00000526232 SLC52A2Q9HAB3 445 aa24.21■■□□□ 1.47
CPNE7-204ENST00000526232 UBR3Q6ZT12 1888 aa24.21■■□□□ 1.47
CPNE7-204ENST00000526232 RNMTO43148 476 aaKnown RBP24.2■■□□□ 1.46
CPNE7-204ENST00000526232 ADAMTS7Q9UKP4 1686 aa24.19■■□□□ 1.46
CPNE7-204ENST00000526232 MSL1Q68DK7 614 aa24.19■■□□□ 1.46
CPNE7-204ENST00000526232 SLC4A9Q96Q91 983 aa24.19■■□□□ 1.46
CPNE7-204ENST00000526232 LGR6Q9HBX8 967 aa24.19■■□□□ 1.46
CPNE7-204ENST00000526232 PTCD1O75127 700 aaKnown RBP24.18■■□□□ 1.46
CPNE7-204ENST00000526232 AMIGO3Q86WK7 504 aa24.18■■□□□ 1.46
CPNE7-204ENST00000526232 PRKAR2BP31323 418 aa24.17■■□□□ 1.46
CPNE7-204ENST00000526232 KLHL34Q8N239 644 aa24.17■■□□□ 1.46
CPNE7-204ENST00000526232 CNTNAP4Q9C0A0 1308 aa24.16■■□□□ 1.46
CPNE7-204ENST00000526232 COL5A3P25940 1745 aaPredicted RBP24.16■■□□□ 1.46
CPNE7-204ENST00000526232 U2AF1L5P0DN76 240 aaPredicted RBP24.16■■□□□ 1.46
CPNE7-204ENST00000526232 U2AF1Q01081 240 aaKnown RBP eCLIP24.16■■□□□ 1.46
CPNE7-204ENST00000526232 RSPH6AQ9H0K4 717 aa24.16■■□□□ 1.46
CPNE7-204ENST00000526232 CICQ96RK0 1608 aaPredicted RBP24.15■■□□□ 1.46
CPNE7-204ENST00000526232 GNAT3A8MTJ3 354 aa24.14■■□□□ 1.45
CPNE7-204ENST00000526232 RC3H1Q5TC82 1133 aaKnown RBP24.14■■□□□ 1.45
CPNE7-204ENST00000526232 RTCBQ9Y3I0 505 aaKnown RBP24.14■■□□□ 1.45
CPNE7-204ENST00000526232 SMIM5Q71RC9 77 aa24.13■■□□□ 1.45
CPNE7-204ENST00000526232 TJP1Q07157 1748 aa24.11■■□□□ 1.45
CPNE7-204ENST00000526232 FCHSD2O94868 740 aa24.11■■□□□ 1.45
CPNE7-204ENST00000526232 ADRA2BP18089 450 aa24.11■■□□□ 1.45
CPNE7-204ENST00000526232 PHACTR3Q96KR7 559 aa24.11■■□□□ 1.45
CPNE7-204ENST00000526232 VIRMAQ69YN4 1812 aaKnown RBP24.1■■□□□ 1.45
CPNE7-204ENST00000526232 TEFQ10587 303 aa24.1■■□□□ 1.45
CPNE7-204ENST00000526232 TRAPPC3LQ5T215 181 aa24.1■■□□□ 1.45
CPNE7-204ENST00000526232 KCPQ6ZWJ8 1503 aa24.1■■□□□ 1.45
CPNE7-204ENST00000526232 DDX10Q13206 875 aaKnown RBP24.09■■□□□ 1.45
CPNE7-204ENST00000526232 SLC39A6Q13433 755 aa24.09■■□□□ 1.45
CPNE7-204ENST00000526232 RALBP1Q15311 655 aa24.09■■□□□ 1.45
CPNE7-204ENST00000526232 RPS6KA4O75676 772 aa24.08■■□□□ 1.45
CPNE7-204ENST00000526232 CRKLP46109 303 aaKnown RBP24.08■■□□□ 1.45
CPNE7-204ENST00000526232 TTC5Q8N0Z6 440 aa24.08■■□□□ 1.45
CPNE7-204ENST00000526232 IL17REQ8NFR9 667 aa24.07■■□□□ 1.44
CPNE7-204ENST00000526232 CEMIPQ8WUJ3 1361 aa24.06■■□□□ 1.44
CPNE7-204ENST00000526232 DNAJC10Q8IXB1 793 aa24.06■■□□□ 1.44
CPNE7-204ENST00000526232 NEFMP07197 916 aa24.05■■□□□ 1.44
CPNE7-204ENST00000526232 RFC4P35249 363 aa24.05■■□□□ 1.44
CPNE7-204ENST00000526232 ZEB1P37275 1124 aaPredicted RBP24.05■■□□□ 1.44
CPNE7-204ENST00000526232 VSIG10Q8N0Z9 540 aa24.04■■□□□ 1.44
CPNE7-204ENST00000526232 NLGN2Q8NFZ4 835 aa24.04■■□□□ 1.44
CPNE7-204ENST00000526232 ARHGEF1Q92888 912 aaKnown RBP24.04■■□□□ 1.44
CPNE7-204ENST00000526232 CD2APQ9Y5K6 639 aa24.04■■□□□ 1.44
CPNE7-204ENST00000526232 UBR2Q8IWV8 1755 aa24.03■■□□□ 1.44
CPNE7-204ENST00000526232 RTF1Q92541 710 aaKnown RBP24.03■■□□□ 1.44
CPNE7-204ENST00000526232 CCDC87Q9NVE4 849 aa24.03■■□□□ 1.44
CPNE7-204ENST00000526232 SIPA1L3O60292 1781 aaPredicted RBP24.02■■□□□ 1.44
CPNE7-204ENST00000526232 NLGN1Q8N2Q7 840 aa24.02■■□□□ 1.44
CPNE7-204ENST00000526232 YY1P25490 414 aa24.01■■□□□ 1.43
CPNE7-204ENST00000526232 GPR162Q16538 588 aa24.01■■□□□ 1.43
CPNE7-204ENST00000526232 ZNF790Q6PG37 636 aa24.01■■□□□ 1.43
CPNE7-204ENST00000526232 MYH14Q7Z406 1995 aaKnown RBP24.01■■□□□ 1.43
CPNE7-204ENST00000526232 C4AP0C0L4 1744 aa24.01■■□□□ 1.43
CPNE7-204ENST00000526232 MMP10P09238 476 aa24■■□□□ 1.43
CPNE7-204ENST00000526232 CYP19A1P11511 503 aaPredicted RBP24■■□□□ 1.43
CPNE7-204ENST00000526232 INTS5Q6P9B9 1019 aaKnown RBP24■■□□□ 1.43
CPNE7-204ENST00000526232 PELP1Q8IZL8 1130 aaKnown RBP23.99■■□□□ 1.43
CPNE7-204ENST00000526232 MYBBP1AQ9BQG0 1328 aaKnown RBP23.99■■□□□ 1.43
CPNE7-204ENST00000526232 HTATSF1O43719 755 aaKnown RBP23.98■■□□□ 1.43
CPNE7-204ENST00000526232 GYS1P13807 737 aa23.98■■□□□ 1.43
CPNE7-204ENST00000526232 ZNF496Q96IT1 587 aaPredicted RBP23.98■■□□□ 1.43
CPNE7-204ENST00000526232 PNNQ9H307 717 aaKnown RBP23.98■■□□□ 1.43
CPNE7-204ENST00000526232 USP42Q9H9J4 1324 aaKnown RBP23.98■■□□□ 1.43
CPNE7-204ENST00000526232 HEG1Q9ULI3 1381 aa23.98■■□□□ 1.43
CPNE7-204ENST00000526232 BTBD11A6QL63 1104 aa23.97■■□□□ 1.43
CPNE7-204ENST00000526232 SOS1Q07889 1333 aaPredicted RBP23.97■■□□□ 1.43
CPNE7-204ENST00000526232 MCM10Q7L590 875 aa23.97■■□□□ 1.43
CPNE7-204ENST00000526232 MAPK8IP3Q9UPT6 1336 aa23.97■■□□□ 1.43
CPNE7-204ENST00000526232 STARD3NLO95772 234 aa23.96■■□□□ 1.43
CPNE7-204ENST00000526232 FMNL2Q96PY5 1086 aa23.96■■□□□ 1.43
CPNE7-204ENST00000526232 ZBTB1Q9Y2K1 713 aa23.96■■□□□ 1.43
CPNE7-204ENST00000526232 COL15A1P39059 1388 aa23.95■■□□□ 1.42
CPNE7-204ENST00000526232 TEX13AQ9BXU3 409 aaPredicted RBP23.95■■□□□ 1.42
CPNE7-204ENST00000526232 PLEKHF1Q96S99 279 aa23.94■■□□□ 1.42
CPNE7-204ENST00000526232 SRP68Q9UHB9 627 aaKnown RBP23.94■■□□□ 1.42
CPNE7-204ENST00000526232 ZPR1O75312 459 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms