RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 LZTS3O60299 673 aaPredicted RBP11.58□□□□□ -0.56
COPB1-204ENST00000526191 LORP23490 312 aaPredicted RBP11.58□□□□□ -0.56
COPB1-204ENST00000526191 KRT76Q01546 638 aa11.58□□□□□ -0.56
COPB1-204ENST00000526191 USP17L2Q6R6M4 530 aa11.58□□□□□ -0.56
COPB1-204ENST00000526191 SV2AQ7L0J3 742 aa11.58□□□□□ -0.56
COPB1-204ENST00000526191 USP17L1Q7RTZ2 530 aa11.58□□□□□ -0.56
COPB1-204ENST00000526191 TIMMDC1Q9NPL8 285 aa11.58□□□□□ -0.56
COPB1-204ENST00000526191 DYRK1BQ9Y463 629 aa11.58□□□□□ -0.56
COPB1-204ENST00000526191 C4orf17Q53FE4 359 aa11.57□□□□□ -0.56
COPB1-204ENST00000526191 TMEM214Q6NUQ4 689 aaKnown RBP11.57□□□□□ -0.56
COPB1-204ENST00000526191 RIPOR1Q6ZS17 1223 aa11.57□□□□□ -0.56
COPB1-204ENST00000526191 WDR44Q5JSH3 913 aa11.56□□□□□ -0.56
COPB1-204ENST00000526191 PLEKHM2Q8IWE5 1019 aa11.56□□□□□ -0.56
COPB1-204ENST00000526191 COL25A1Q9BXS0 654 aaPredicted RBP11.56□□□□□ -0.56
COPB1-204ENST00000526191 PSME1Q06323 249 aa11.55□□□□□ -0.56
COPB1-204ENST00000526191 GNASQ5JWF2 1037 aa11.55□□□□□ -0.56
COPB1-204ENST00000526191 ZNF837Q96EG3 531 aaPredicted RBP11.55□□□□□ -0.56
COPB1-204ENST00000526191 CALR3Q96L12 384 aaKnown RBP11.55□□□□□ -0.56
COPB1-204ENST00000526191 CNTNAP3BQ96NU0 1288 aa11.55□□□□□ -0.56
COPB1-204ENST00000526191 CNTNAP3Q9BZ76 1288 aa11.55□□□□□ -0.56
COPB1-204ENST00000526191 GTF2E1P29083 439 aaPredicted RBP11.54□□□□□ -0.56
COPB1-204ENST00000526191 SMTNP53814 917 aa11.54□□□□□ -0.56
COPB1-204ENST00000526191 DBN1Q16643 649 aa11.54□□□□□ -0.56
COPB1-204ENST00000526191 RNFT1Q5M7Z0 435 aa11.54□□□□□ -0.56
COPB1-204ENST00000526191 PPARGC1BQ86YN6 1023 aaKnown RBP11.54□□□□□ -0.56
COPB1-204ENST00000526191 TFIP11Q9UBB9 837 aaKnown RBP11.54□□□□□ -0.56
COPB1-204ENST00000526191 TRIM22Q8IYM9 498 aa11.53□□□□□ -0.56
COPB1-204ENST00000526191 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.53□□□□□ -0.56
COPB1-204ENST00000526191 RHBDD1Q8TEB9 315 aa11.53□□□□□ -0.56
COPB1-204ENST00000526191 GPAMQ9HCL2 828 aa11.53□□□□□ -0.56
COPB1-204ENST00000526191 KIAA1024Q9UPX6 916 aa11.53□□□□□ -0.56
COPB1-204ENST00000526191 ZNF358Q9NW07 568 aa11.52□□□□□ -0.57
COPB1-204ENST00000526191 ZNF777Q9ULD5 760 aaPredicted RBP11.52□□□□□ -0.57
COPB1-204ENST00000526191 USP3Q9Y6I4 520 aa11.52□□□□□ -0.57
COPB1-204ENST00000526191 ZBTB7BO15156 539 aaPredicted RBP11.51□□□□□ -0.57
COPB1-204ENST00000526191 CLDN10P78369 228 aa11.51□□□□□ -0.57
COPB1-204ENST00000526191 ZSCAN1Q8NBB4 408 aa11.51□□□□□ -0.57
COPB1-204ENST00000526191 SLC4A9Q96Q91 983 aa11.51□□□□□ -0.57
COPB1-204ENST00000526191 MKRN1Q9UHC7 482 aaKnown RBP11.51□□□□□ -0.57
COPB1-204ENST00000526191 MAFBQ9Y5Q3 323 aaPredicted RBP11.51□□□□□ -0.57
COPB1-204ENST00000526191 PALM3A6NDB9 673 aaPredicted RBP11.5□□□□□ -0.57
COPB1-204ENST00000526191 A6NJY4 79 aa11.5□□□□□ -0.57
COPB1-204ENST00000526191 GPR25O00155 361 aa11.5□□□□□ -0.57
COPB1-204ENST00000526191 F11P03951 625 aa11.5□□□□□ -0.57
COPB1-204ENST00000526191 PLA2G4AP47712 749 aa11.5□□□□□ -0.57
COPB1-204ENST00000526191 TRIM50Q86XT4 487 aa11.5□□□□□ -0.57
COPB1-204ENST00000526191 MTFR1Q15390 333 aa11.49□□□□□ -0.57
COPB1-204ENST00000526191 TPCN2Q8NHX9 752 aa11.49□□□□□ -0.57
COPB1-204ENST00000526191 A0A1B0GTH6 734 aa11.48□□□□□ -0.57
COPB1-204ENST00000526191 THBS1P07996 1170 aa11.48□□□□□ -0.57
COPB1-204ENST00000526191 GAS6Q14393 721 aa11.48□□□□□ -0.57
COPB1-204ENST00000526191 ZNF295-AS1Q8N0V1 137 aa11.48□□□□□ -0.57
COPB1-204ENST00000526191 OGFOD1Q8N543 542 aa11.48□□□□□ -0.57
COPB1-204ENST00000526191 GTPBP3Q969Y2 492 aaKnown RBP11.48□□□□□ -0.57
COPB1-204ENST00000526191 PPP1R12CQ9BZL4 782 aa11.48□□□□□ -0.57
COPB1-204ENST00000526191 DNAAF2Q9NVR5 837 aaKnown RBP11.48□□□□□ -0.57
COPB1-204ENST00000526191 STK17AQ9UEE5 414 aa11.48□□□□□ -0.57
COPB1-204ENST00000526191 IQSEC3Q9UPP2 1182 aaPredicted RBP11.48□□□□□ -0.57
COPB1-204ENST00000526191 H7C1W4 665 aa11.47□□□□□ -0.57
COPB1-204ENST00000526191 MSX1P28360 303 aa11.47□□□□□ -0.57
COPB1-204ENST00000526191 ATP1A2P50993 1020 aa11.47□□□□□ -0.57
COPB1-204ENST00000526191 GMCL1Q96IK5 515 aa11.47□□□□□ -0.57
COPB1-204ENST00000526191 NUCKS1Q9H1E3 243 aaKnown RBP11.47□□□□□ -0.57
COPB1-204ENST00000526191 GTF3C3Q9Y5Q9 886 aa11.47□□□□□ -0.57
COPB1-204ENST00000526191 BACH1O14867 736 aa11.46□□□□□ -0.57
COPB1-204ENST00000526191 CCDC102BQ68D86 513 aa11.46□□□□□ -0.57
COPB1-204ENST00000526191 ZNF594Q96JF6 807 aaPredicted RBP11.46□□□□□ -0.57
COPB1-204ENST00000526191 NIFKQ9BYG3 293 aaKnown RBP11.46□□□□□ -0.57
COPB1-204ENST00000526191 RUBCNLQ9H714 662 aa11.46□□□□□ -0.57
COPB1-204ENST00000526191 CDK2AP1O14519 115 aa11.45□□□□□ -0.58
COPB1-204ENST00000526191 EPHA4P54764 986 aa11.44□□□□□ -0.58
COPB1-204ENST00000526191 TNS4Q8IZW8 715 aa11.44□□□□□ -0.58
COPB1-204ENST00000526191 SCHIP1Q9P0W5 487 aaPredicted RBP11.44□□□□□ -0.58
COPB1-204ENST00000526191 TBCELQ5QJ74 424 aa11.43□□□□□ -0.58
COPB1-204ENST00000526191 LARGE2Q8N3Y3 721 aa11.43□□□□□ -0.58
COPB1-204ENST00000526191 CABP1Q9NZU7 370 aa11.43□□□□□ -0.58
COPB1-204ENST00000526191 DKK1O94907 266 aa11.42□□□□□ -0.58
COPB1-204ENST00000526191 RASA1P20936 1047 aa11.42□□□□□ -0.58
COPB1-204ENST00000526191 LMOD1P29536 600 aaPredicted RBP11.42□□□□□ -0.58
COPB1-204ENST00000526191 AIDAQ96BJ3 306 aa11.42□□□□□ -0.58
COPB1-204ENST00000526191 PARP3Q9Y6F1 533 aa11.42□□□□□ -0.58
COPB1-204ENST00000526191 SFI1A8K8P3 1242 aa11.41□□□□□ -0.58
COPB1-204ENST00000526191 ATP4AP20648 1035 aa11.41□□□□□ -0.58
COPB1-204ENST00000526191 FOXK2Q01167 660 aa11.41□□□□□ -0.58
COPB1-204ENST00000526191 FOXR1Q6PIV2 292 aa11.41□□□□□ -0.58
COPB1-204ENST00000526191 SIX5Q8N196 739 aa11.41□□□□□ -0.58
COPB1-204ENST00000526191 ZDHHC1Q8WTX9 485 aa11.41□□□□□ -0.58
COPB1-204ENST00000526191 ZMYND15Q9H091 742 aa11.41□□□□□ -0.58
COPB1-204ENST00000526191 CSB-PGBD3P0DP91 1061 aa11.4□□□□□ -0.58
COPB1-204ENST00000526191 UBAP2LQ14157 1087 aaKnown RBP11.4□□□□□ -0.58
COPB1-204ENST00000526191 KANK4Q5T7N3 995 aaPredicted RBP11.4□□□□□ -0.58
COPB1-204ENST00000526191 SLC9A9Q8IVB4 645 aa11.4□□□□□ -0.58
COPB1-204ENST00000526191 PGBD3Q8N328 593 aa11.4□□□□□ -0.58
COPB1-204ENST00000526191 WHAMMQ8TF30 809 aa11.4□□□□□ -0.58
COPB1-204ENST00000526191 ADAMTS2O95450 1211 aa11.39□□□□□ -0.59
COPB1-204ENST00000526191 CFAP70Q5T0N1 1121 aa11.39□□□□□ -0.59
COPB1-204ENST00000526191 TRERF1Q96PN7 1200 aa11.39□□□□□ -0.59
COPB1-204ENST00000526191 CRISPLD1Q9H336 500 aa11.39□□□□□ -0.59
COPB1-204ENST00000526191 SLURP2P0DP57 97 aa11.38□□□□□ -0.59
COPB1-204ENST00000526191 CRTC2Q53ET0 693 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms