RNA–Protein interactions for RNA: ENST00000525945.1

GRAMD1B-205, Transcript of GRAM domain containing 1B, humanhuman

TSL 2

Gene GRAMD1B, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-205ENST00000525945 KIF13BQ9NQT8 1826 aa11.39□□□□□ -0.59
GRAMD1B-205ENST00000525945 NCAPD2Q15021 1401 aa11.38□□□□□ -0.59
GRAMD1B-205ENST00000525945 GNPATO15228 680 aa11.38□□□□□ -0.59
GRAMD1B-205ENST00000525945 TGFB2P61812 414 aa11.38□□□□□ -0.59
GRAMD1B-205ENST00000525945 TMF1P82094 1093 aa11.38□□□□□ -0.59
GRAMD1B-205ENST00000525945 LINC00116Q8NCU8 138 aa11.38□□□□□ -0.59
GRAMD1B-205ENST00000525945 TMOD3Q9NYL9 352 aa11.38□□□□□ -0.59
GRAMD1B-205ENST00000525945 PXDNLA1KZ92 1463 aa11.38□□□□□ -0.59
GRAMD1B-205ENST00000525945 MMP10P09238 476 aa11.37□□□□□ -0.59
GRAMD1B-205ENST00000525945 ATP6V1AP38606 617 aa11.37□□□□□ -0.59
GRAMD1B-205ENST00000525945 CDCA8Q53HL2 280 aa11.37□□□□□ -0.59
GRAMD1B-205ENST00000525945 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.37□□□□□ -0.59
GRAMD1B-205ENST00000525945 KIAA1551Q9HCM1 1747 aa11.36□□□□□ -0.59
GRAMD1B-205ENST00000525945 ANKRD26Q9UPS8 1709 aa11.36□□□□□ -0.59
GRAMD1B-205ENST00000525945 SMIM5Q71RC9 77 aa11.36□□□□□ -0.59
GRAMD1B-205ENST00000525945 BCS1LQ9Y276 419 aa11.36□□□□□ -0.59
GRAMD1B-205ENST00000525945 C10orf71Q711Q0 1435 aa11.35□□□□□ -0.59
GRAMD1B-205ENST00000525945 NLGN1Q8N2Q7 840 aa11.35□□□□□ -0.59
GRAMD1B-205ENST00000525945 RTCBQ9Y3I0 505 aaKnown RBP11.35□□□□□ -0.59
GRAMD1B-205ENST00000525945 PLEKHG2Q9H7P9 1386 aa11.35□□□□□ -0.59
GRAMD1B-205ENST00000525945 ZNF831Q5JPB2 1677 aa11.35□□□□□ -0.59
GRAMD1B-205ENST00000525945 N4BP2Q86UW6 1770 aaPredicted RBP11.34□□□□□ -0.59
GRAMD1B-205ENST00000525945 ITPK1Q13572 414 aa11.34□□□□□ -0.59
GRAMD1B-205ENST00000525945 TRAPPC3LQ5T215 181 aa11.34□□□□□ -0.59
GRAMD1B-205ENST00000525945 IFNL2Q8IZJ0 200 aa11.34□□□□□ -0.59
GRAMD1B-205ENST00000525945 DNAJC5GQ8N7S2 189 aa11.34□□□□□ -0.59
GRAMD1B-205ENST00000525945 CCDC87Q9NVE4 849 aa11.34□□□□□ -0.59
GRAMD1B-205ENST00000525945 ASAP1Q9ULH1 1129 aa11.34□□□□□ -0.59
GRAMD1B-205ENST00000525945 EMILIN1Q9Y6C2 1016 aa11.34□□□□□ -0.59
GRAMD1B-205ENST00000525945 WDR90Q96KV7 1748 aa11.34□□□□□ -0.59
GRAMD1B-205ENST00000525945 C4AP0C0L4 1744 aa11.33□□□□□ -0.6
GRAMD1B-205ENST00000525945 PPM1GO15355 546 aaPredicted RBP11.33□□□□□ -0.6
GRAMD1B-205ENST00000525945 PHKG2P15735 406 aa11.33□□□□□ -0.6
GRAMD1B-205ENST00000525945 ARHGAP27Q6ZUM4 889 aa11.33□□□□□ -0.6
GRAMD1B-205ENST00000525945 C16orf71Q8IYS4 520 aaPredicted RBP11.33□□□□□ -0.6
GRAMD1B-205ENST00000525945 RBM46Q8TBY0 533 aaKnown RBP11.33□□□□□ -0.6
GRAMD1B-205ENST00000525945 WASHC2AQ641Q2 1341 aa11.33□□□□□ -0.6
GRAMD1B-205ENST00000525945 KDRP35968 1356 aa11.32□□□□□ -0.6
GRAMD1B-205ENST00000525945 A0A0G2JLW4 131 aa11.32□□□□□ -0.6
GRAMD1B-205ENST00000525945 FCHSD2O94868 740 aa11.32□□□□□ -0.6
GRAMD1B-205ENST00000525945 ATG3Q9NT62 314 aa11.32□□□□□ -0.6
GRAMD1B-205ENST00000525945 PARP3Q9Y6F1 533 aa11.32□□□□□ -0.6
GRAMD1B-205ENST00000525945 BRCA1P38398 1863 aaKnown RBP11.32□□□□□ -0.6
GRAMD1B-205ENST00000525945 FSTL1Q12841 308 aa11.31□□□□□ -0.6
GRAMD1B-205ENST00000525945 RC3H1Q5TC82 1133 aaKnown RBP11.31□□□□□ -0.6
GRAMD1B-205ENST00000525945 EYA1Q99502 592 aa11.31□□□□□ -0.6
GRAMD1B-205ENST00000525945 NMRK2Q9NPI5 230 aa11.31□□□□□ -0.6
GRAMD1B-205ENST00000525945 COL5A3P25940 1745 aaPredicted RBP11.31□□□□□ -0.6
GRAMD1B-205ENST00000525945 KDM2BQ8NHM5 1336 aa11.31□□□□□ -0.6
GRAMD1B-205ENST00000525945 CNTNAP4Q9C0A0 1308 aa11.31□□□□□ -0.6
GRAMD1B-205ENST00000525945 ARFGEF1Q9Y6D6 1849 aa11.3□□□□□ -0.6
GRAMD1B-205ENST00000525945 HSP90AB1P08238 724 aaKnown RBP11.3□□□□□ -0.6
GRAMD1B-205ENST00000525945 DPEP1P16444 411 aa11.3□□□□□ -0.6
GRAMD1B-205ENST00000525945 RFC4P35249 363 aa11.3□□□□□ -0.6
GRAMD1B-205ENST00000525945 ARHGEF1Q92888 912 aaKnown RBP11.3□□□□□ -0.6
GRAMD1B-205ENST00000525945 KLRG1Q96E93 195 aa11.3□□□□□ -0.6
GRAMD1B-205ENST00000525945 ERVV-2B6SEH9 535 aa11.29□□□□□ -0.6
GRAMD1B-205ENST00000525945 RPS6KA4O75676 772 aa11.29□□□□□ -0.6
GRAMD1B-205ENST00000525945 GYS1P13807 737 aa11.29□□□□□ -0.6
GRAMD1B-205ENST00000525945 C9orf131Q5VYM1 1079 aa11.29□□□□□ -0.6
GRAMD1B-205ENST00000525945 DCAF5Q96JK2 942 aa11.29□□□□□ -0.6
GRAMD1B-205ENST00000525945 RBM42Q9BTD8 480 aaKnown RBP11.29□□□□□ -0.6
GRAMD1B-205ENST00000525945 CARD14Q9BXL6 1004 aa11.29□□□□□ -0.6
GRAMD1B-205ENST00000525945 PIM2Q9P1W9 311 aa11.29□□□□□ -0.6
GRAMD1B-205ENST00000525945 TNRC6CQ9HCJ0 1690 aaKnown RBP11.29□□□□□ -0.6
GRAMD1B-205ENST00000525945 JMYQ8N9B5 988 aa11.28□□□□□ -0.6
GRAMD1B-205ENST00000525945 KCPQ6ZWJ8 1503 aa11.27□□□□□ -0.61
GRAMD1B-205ENST00000525945 KCNA3P22001 575 aa11.27□□□□□ -0.61
GRAMD1B-205ENST00000525945 DALRD3Q5D0E6 543 aaKnown RBP11.26□□□□□ -0.61
GRAMD1B-205ENST00000525945 SLC4A9Q96Q91 983 aa11.26□□□□□ -0.61
GRAMD1B-205ENST00000525945 RNF181Q9P0P0 153 aa11.26□□□□□ -0.61
GRAMD1B-205ENST00000525945 POLKQ9UBT6 870 aa11.26□□□□□ -0.61
GRAMD1B-205ENST00000525945 CABP4P57796 275 aa11.25□□□□□ -0.61
GRAMD1B-205ENST00000525945 EIF4A2Q14240 407 aaKnown RBP11.25□□□□□ -0.61
GRAMD1B-205ENST00000525945 PLEKHO1Q53GL0 409 aaPredicted RBP11.25□□□□□ -0.61
GRAMD1B-205ENST00000525945 SMC1BQ8NDV3 1235 aa11.25□□□□□ -0.61
GRAMD1B-205ENST00000525945 ZC3H4Q9UPT8 1303 aaKnown RBP11.25□□□□□ -0.61
GRAMD1B-205ENST00000525945 AMOTQ4VCS5 1084 aa11.24□□□□□ -0.61
GRAMD1B-205ENST00000525945 COL13A1Q5TAT6 717 aaPredicted RBP11.24□□□□□ -0.61
GRAMD1B-205ENST00000525945 RRAGCQ9HB90 399 aa11.24□□□□□ -0.61
GRAMD1B-205ENST00000525945 USP42Q9H9J4 1324 aaKnown RBP11.24□□□□□ -0.61
GRAMD1B-205ENST00000525945 CRKLP46109 303 aaKnown RBP11.23□□□□□ -0.61
GRAMD1B-205ENST00000525945 HTRA3P83110 453 aa11.23□□□□□ -0.61
GRAMD1B-205ENST00000525945 TNS4Q8IZW8 715 aa11.23□□□□□ -0.61
GRAMD1B-205ENST00000525945 DAXXQ9UER7 740 aaPredicted RBP11.23□□□□□ -0.61
GRAMD1B-205ENST00000525945 U3KPZ7 1027 aaPredicted RBP11.23□□□□□ -0.61
GRAMD1B-205ENST00000525945 KDM6AO15550 1401 aaPredicted RBP11.23□□□□□ -0.61
GRAMD1B-205ENST00000525945 PTCD1O75127 700 aaKnown RBP11.22□□□□□ -0.61
GRAMD1B-205ENST00000525945 MTHFSP49914 203 aa11.22□□□□□ -0.61
GRAMD1B-205ENST00000525945 C1orf141Q5JVX7 400 aa11.22□□□□□ -0.61
GRAMD1B-205ENST00000525945 ZNF530Q6P9A1 599 aaPredicted RBP11.22□□□□□ -0.61
GRAMD1B-205ENST00000525945 MYH14Q7Z406 1995 aaKnown RBP11.21□□□□□ -0.61
GRAMD1B-205ENST00000525945 TJP1Q07157 1748 aa11.21□□□□□ -0.61
GRAMD1B-205ENST00000525945 SLC4A2P04920 1241 aa11.21□□□□□ -0.61
GRAMD1B-205ENST00000525945 DDR1Q08345 913 aa11.21□□□□□ -0.61
GRAMD1B-205ENST00000525945 FKBP8Q14318 412 aa11.21□□□□□ -0.61
GRAMD1B-205ENST00000525945 SP7Q8TDD2 431 aaPredicted RBP11.21□□□□□ -0.61
GRAMD1B-205ENST00000525945 SRP68Q9UHB9 627 aaKnown RBP11.21□□□□□ -0.61
GRAMD1B-205ENST00000525945 SBF1O95248 1867 aa11.21□□□□□ -0.62
GRAMD1B-205ENST00000525945 POLRMTO00411 1230 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms