RNA–Protein interactions for RNA: ENST00000525913.1

SSH3-204, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 264 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-204ENST00000525913 CCDC88AQ3V6T2 1871 aa10.03□□□□□ -0.8
SSH3-204ENST00000525913 TMC1Q8TDI8 760 aa10.03□□□□□ -0.8
SSH3-204ENST00000525913 DCAF5Q96JK2 942 aa10.03□□□□□ -0.8
SSH3-204ENST00000525913 C4AP0C0L4 1744 aa10.02□□□□□ -0.8
SSH3-204ENST00000525913 GNPATO15228 680 aa10.02□□□□□ -0.81
SSH3-204ENST00000525913 TATP17735 454 aaPredicted RBP10.02□□□□□ -0.81
SSH3-204ENST00000525913 TMF1P82094 1093 aa10.02□□□□□ -0.81
SSH3-204ENST00000525913 NLGN1Q8N2Q7 840 aa10.02□□□□□ -0.81
SSH3-204ENST00000525913 RAPGEF4Q8WZA2 1011 aa10.02□□□□□ -0.81
SSH3-204ENST00000525913 PCDH10Q9P2E7 1040 aa10.02□□□□□ -0.81
SSH3-204ENST00000525913 PCDH11XQ9BZA7 1347 aa10.02□□□□□ -0.81
SSH3-204ENST00000525913 PCDH11YQ9BZA8 1340 aa10.02□□□□□ -0.81
SSH3-204ENST00000525913 MYH14Q7Z406 1995 aaKnown RBP10.01□□□□□ -0.81
SSH3-204ENST00000525913 POTECB2RU33 542 aa10.01□□□□□ -0.81
SSH3-204ENST00000525913 RRS1Q15050 365 aaKnown RBP10.01□□□□□ -0.81
SSH3-204ENST00000525913 TRAPPC3LQ5T215 181 aa10.01□□□□□ -0.81
SSH3-204ENST00000525913 ARHGEF1Q92888 912 aaKnown RBP10.01□□□□□ -0.81
SSH3-204ENST00000525913 RNF181Q9P0P0 153 aa10.01□□□□□ -0.81
SSH3-204ENST00000525913 ASAP1Q9ULH1 1129 aa10.01□□□□□ -0.81
SSH3-204ENST00000525913 GYS1P13807 737 aa10□□□□□ -0.81
SSH3-204ENST00000525913 ATP6V1AP38606 617 aa10□□□□□ -0.81
SSH3-204ENST00000525913 COG3Q96JB2 828 aa10□□□□□ -0.81
SSH3-204ENST00000525913 SLC4A9Q96Q91 983 aa10□□□□□ -0.81
SSH3-204ENST00000525913 CCDC87Q9NVE4 849 aa10□□□□□ -0.81
SSH3-204ENST00000525913 TERF2IPQ9NYB0 399 aa10□□□□□ -0.81
SSH3-204ENST00000525913 PIM2Q9P1W9 311 aa10□□□□□ -0.81
SSH3-204ENST00000525913 ROCK2O75116 1388 aaKnown RBP10□□□□□ -0.81
SSH3-204ENST00000525913 VEGFAP15692 232 aaPredicted RBP9.99□□□□□ -0.81
SSH3-204ENST00000525913 HSP90AB2PQ58FF8 381 aa9.99□□□□□ -0.81
SSH3-204ENST00000525913 PUS7Q96PZ0 661 aaKnown RBP9.99□□□□□ -0.81
SSH3-204ENST00000525913 ATG3Q9NT62 314 aa9.99□□□□□ -0.81
SSH3-204ENST00000525913 KDM6AO15550 1401 aaPredicted RBP9.99□□□□□ -0.81
SSH3-204ENST00000525913 GLTPD2A6NH11 291 aa9.98□□□□□ -0.81
SSH3-204ENST00000525913 FOXN1O15353 648 aa9.98□□□□□ -0.81
SSH3-204ENST00000525913 DALRD3Q5D0E6 543 aaKnown RBP9.98□□□□□ -0.81
SSH3-204ENST00000525913 PRDM10Q9NQV6 1147 aa9.98□□□□□ -0.81
SSH3-204ENST00000525913 RTCBQ9Y3I0 505 aaKnown RBP9.98□□□□□ -0.81
SSH3-204ENST00000525913 RTL1A6NKG5 1358 aa9.98□□□□□ -0.81
SSH3-204ENST00000525913 COL5A3P25940 1745 aaPredicted RBP9.97□□□□□ -0.81
SSH3-204ENST00000525913 RC3H1Q5TC82 1133 aaKnown RBP9.97□□□□□ -0.81
SSH3-204ENST00000525913 PARP3Q9Y6F1 533 aa9.97□□□□□ -0.81
SSH3-204ENST00000525913 INSRP06213 1382 aa9.97□□□□□ -0.81
SSH3-204ENST00000525913 ZNF831Q5JPB2 1677 aa9.96□□□□□ -0.81
SSH3-204ENST00000525913 FYB1O15117 783 aa9.96□□□□□ -0.82
SSH3-204ENST00000525913 RPS6KA4O75676 772 aa9.96□□□□□ -0.82
SSH3-204ENST00000525913 CHRNA5P30532 468 aa9.96□□□□□ -0.82
SSH3-204ENST00000525913 SIN3AQ96ST3 1273 aa9.96□□□□□ -0.82
SSH3-204ENST00000525913 ZC3H4Q9UPT8 1303 aaKnown RBP9.96□□□□□ -0.82
SSH3-204ENST00000525913 VIRMAQ69YN4 1812 aaKnown RBP9.96□□□□□ -0.82
SSH3-204ENST00000525913 ADRA2BP18089 450 aa9.95□□□□□ -0.82
SSH3-204ENST00000525913 RASSF7Q02833 373 aa9.95□□□□□ -0.82
SSH3-204ENST00000525913 DDR1Q08345 913 aa9.95□□□□□ -0.82
SSH3-204ENST00000525913 TMOD3Q9NYL9 352 aa9.95□□□□□ -0.82
SSH3-204ENST00000525913 KDRP35968 1356 aa9.95□□□□□ -0.82
SSH3-204ENST00000525913 NCAPD2Q15021 1401 aa9.95□□□□□ -0.82
SSH3-204ENST00000525913 TM4SF1P30408 202 aa9.94□□□□□ -0.82
SSH3-204ENST00000525913 RFC4P35249 363 aa9.94□□□□□ -0.82
SSH3-204ENST00000525913 FAM161AQ3B820 660 aa9.94□□□□□ -0.82
SSH3-204ENST00000525913 CREBZFQ9NS37 354 aa9.94□□□□□ -0.82
SSH3-204ENST00000525913 MKRN1Q9UHC7 482 aaKnown RBP9.94□□□□□ -0.82
SSH3-204ENST00000525913 DICER1Q9UPY3 1922 aaKnown RBP9.94□□□□□ -0.82
SSH3-204ENST00000525913 CNTNAP4Q9C0A0 1308 aa9.93□□□□□ -0.82
SSH3-204ENST00000525913 LMNB1P20700 586 aa9.93□□□□□ -0.82
SSH3-204ENST00000525913 RGS19P49795 217 aa9.93□□□□□ -0.82
SSH3-204ENST00000525913 FKBP8Q14318 412 aa9.93□□□□□ -0.82
SSH3-204ENST00000525913 GGNBP2Q9H3C7 697 aa9.93□□□□□ -0.82
SSH3-204ENST00000525913 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.93□□□□□ -0.82
SSH3-204ENST00000525913 SPG7Q9UQ90 795 aa9.93□□□□□ -0.82
SSH3-204ENST00000525913 AFDNP55196 1824 aaKnown RBP9.93□□□□□ -0.82
SSH3-204ENST00000525913 SMG6Q86US8 1419 aaKnown RBP9.92□□□□□ -0.82
SSH3-204ENST00000525913 TONSLQ96HA7 1378 aa9.92□□□□□ -0.82
SSH3-204ENST00000525913 PHKG2P15735 406 aa9.92□□□□□ -0.82
SSH3-204ENST00000525913 SRP68Q9UHB9 627 aaKnown RBP9.92□□□□□ -0.82
SSH3-204ENST00000525913 ADAMTS7Q9UKP4 1686 aa9.92□□□□□ -0.82
SSH3-204ENST00000525913 FLT4P35916 1363 aa9.91□□□□□ -0.82
SSH3-204ENST00000525913 CNTNAP1P78357 1384 aa9.91□□□□□ -0.82
SSH3-204ENST00000525913 KIF24Q5T7B8 1368 aa9.91□□□□□ -0.82
SSH3-204ENST00000525913 TIAM2Q8IVF5 1701 aa9.91□□□□□ -0.82
SSH3-204ENST00000525913 POLRMTO00411 1230 aaKnown RBP9.91□□□□□ -0.82
SSH3-204ENST00000525913 POTEIP0CG38 1075 aa9.91□□□□□ -0.82
SSH3-204ENST00000525913 POTEJP0CG39 1038 aa9.91□□□□□ -0.82
SSH3-204ENST00000525913 CTCFP49711 727 aaPredicted RBP9.91□□□□□ -0.82
SSH3-204ENST00000525913 IFNL2Q8IZJ0 200 aa9.91□□□□□ -0.82
SSH3-204ENST00000525913 ABHD8Q96I13 439 aa9.91□□□□□ -0.82
SSH3-204ENST00000525913 TESK2Q96S53 571 aa9.91□□□□□ -0.82
SSH3-204ENST00000525913 CARD11Q9BXL7 1154 aa9.91□□□□□ -0.82
SSH3-204ENST00000525913 WBP1LQ9NX94 342 aa9.91□□□□□ -0.82
SSH3-204ENST00000525913 DLEC1Q9Y238 1755 aa9.91□□□□□ -0.82
SSH3-204ENST00000525913 NFKBIEO00221 500 aa9.9□□□□□ -0.82
SSH3-204ENST00000525913 LBX1P52954 281 aa9.9□□□□□ -0.82
SSH3-204ENST00000525913 EYA1Q99502 592 aa9.9□□□□□ -0.82
SSH3-204ENST00000525913 RBM42Q9BTD8 480 aaKnown RBP9.9□□□□□ -0.82
SSH3-204ENST00000525913 PASKQ96RG2 1323 aa9.89□□□□□ -0.83
SSH3-204ENST00000525913 USP42Q9H9J4 1324 aaKnown RBP9.89□□□□□ -0.83
SSH3-204ENST00000525913 VEGFBP49765 207 aa9.89□□□□□ -0.83
SSH3-204ENST00000525913 CHADLQ6NUI6 762 aa9.89□□□□□ -0.83
SSH3-204ENST00000525913 EMILIN1Q9Y6C2 1016 aa9.89□□□□□ -0.83
SSH3-204ENST00000525913 NRXN2Q9P2S2 1712 aa9.89□□□□□ -0.83
SSH3-204ENST00000525913 FER1L6Q2WGJ9 1857 aa9.89□□□□□ -0.83
SSH3-204ENST00000525913 ERVV-2B6SEH9 535 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms