RNA–Protein interactions for RNA: ENST00000525659.5

CSF1-207, Transcript of colony stimulating factor 1, humanhuman

TSL 4

Gene CSF1, Length 551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1-207ENST00000525659 HSPA1AP0DMV8 641 aaKnown RBP22.88■■□□□ 1.25
CSF1-207ENST00000525659 HSPA1BP0DMV9 641 aaKnown RBP22.88■■□□□ 1.25
CSF1-207ENST00000525659 PKD1L3Q7Z443 1732 aa22.87■■□□□ 1.25
CSF1-207ENST00000525659 HSP90AB2PQ58FF8 381 aa22.86■■□□□ 1.25
CSF1-207ENST00000525659 ASAP1Q9ULH1 1129 aa22.86■■□□□ 1.25
CSF1-207ENST00000525659 PLEKHG2Q9H7P9 1386 aa22.85■■□□□ 1.25
CSF1-207ENST00000525659 NKX1-1Q15270 411 aaPredicted RBP22.83■■□□□ 1.25
CSF1-207ENST00000525659 ARFGEF1Q9Y6D6 1849 aa22.82■■□□□ 1.24
CSF1-207ENST00000525659 ATP6V1AP38606 617 aa22.82■■□□□ 1.24
CSF1-207ENST00000525659 RNF181Q9P0P0 153 aa22.82■■□□□ 1.24
CSF1-207ENST00000525659 C4AP0C0L4 1744 aa22.82■■□□□ 1.24
CSF1-207ENST00000525659 SMG6Q86US8 1419 aaKnown RBP22.82■■□□□ 1.24
CSF1-207ENST00000525659 KDM2BQ8NHM5 1336 aa22.82■■□□□ 1.24
CSF1-207ENST00000525659 TMF1P82094 1093 aa22.81■■□□□ 1.24
CSF1-207ENST00000525659 DCAF5Q96JK2 942 aa22.81■■□□□ 1.24
CSF1-207ENST00000525659 INSRP06213 1382 aa22.8■■□□□ 1.24
CSF1-207ENST00000525659 SLC34A2O95436 690 aa22.8■■□□□ 1.24
CSF1-207ENST00000525659 SMC1BQ8NDV3 1235 aa22.8■■□□□ 1.24
CSF1-207ENST00000525659 CARD11Q9BXL7 1154 aa22.8■■□□□ 1.24
CSF1-207ENST00000525659 GGNBP2Q9H3C7 697 aa22.8■■□□□ 1.24
CSF1-207ENST00000525659 CCDC87Q9NVE4 849 aa22.8■■□□□ 1.24
CSF1-207ENST00000525659 TNRC6CQ9HCJ0 1690 aaKnown RBP22.79■■□□□ 1.24
CSF1-207ENST00000525659 GYS1P13807 737 aa22.79■■□□□ 1.24
CSF1-207ENST00000525659 NEUROD1Q13562 356 aa22.79■■□□□ 1.24
CSF1-207ENST00000525659 NLGN1Q8N2Q7 840 aa22.79■■□□□ 1.24
CSF1-207ENST00000525659 PUS7Q96PZ0 661 aaKnown RBP22.79■■□□□ 1.24
CSF1-207ENST00000525659 SLC4A9Q96Q91 983 aa22.79■■□□□ 1.24
CSF1-207ENST00000525659 FYB1O15117 783 aa22.78■■□□□ 1.24
CSF1-207ENST00000525659 TRAPPC3LQ5T215 181 aa22.78■■□□□ 1.24
CSF1-207ENST00000525659 ARHGEF1Q92888 912 aaKnown RBP22.78■■□□□ 1.24
CSF1-207ENST00000525659 ATG3Q9NT62 314 aa22.78■■□□□ 1.24
CSF1-207ENST00000525659 TMOD3Q9NYL9 352 aa22.77■■□□□ 1.24
CSF1-207ENST00000525659 SBF1O95248 1867 aa22.77■■□□□ 1.24
CSF1-207ENST00000525659 KDRP35968 1356 aa22.76■■□□□ 1.23
CSF1-207ENST00000525659 PIM2Q9P1W9 311 aa22.76■■□□□ 1.23
CSF1-207ENST00000525659 RTCBQ9Y3I0 505 aaKnown RBP22.76■■□□□ 1.23
CSF1-207ENST00000525659 DALRD3Q5D0E6 543 aaKnown RBP22.74■■□□□ 1.23
CSF1-207ENST00000525659 PARP3Q9Y6F1 533 aa22.74■■□□□ 1.23
CSF1-207ENST00000525659 NCAPD2Q15021 1401 aa22.74■■□□□ 1.23
CSF1-207ENST00000525659 CHRNA5P30532 468 aa22.73■■□□□ 1.23
CSF1-207ENST00000525659 TESK2Q96S53 571 aa22.73■■□□□ 1.23
CSF1-207ENST00000525659 FLT4P35916 1363 aa22.73■■□□□ 1.23
CSF1-207ENST00000525659 RASSF7Q02833 373 aa22.71■■□□□ 1.23
CSF1-207ENST00000525659 DDR1Q08345 913 aa22.7■■□□□ 1.22
CSF1-207ENST00000525659 SPG7Q9UQ90 795 aa22.69■■□□□ 1.22
CSF1-207ENST00000525659 EMILIN1Q9Y6C2 1016 aa22.69■■□□□ 1.22
CSF1-207ENST00000525659 MYH14Q7Z406 1995 aaKnown RBP22.69■■□□□ 1.22
CSF1-207ENST00000525659 COL5A3P25940 1745 aaPredicted RBP22.68■■□□□ 1.22
CSF1-207ENST00000525659 RPS6KA4O75676 772 aa22.68■■□□□ 1.22
CSF1-207ENST00000525659 PHKG2P15735 406 aa22.68■■□□□ 1.22
CSF1-207ENST00000525659 ADRA2BP18089 450 aa22.68■■□□□ 1.22
CSF1-207ENST00000525659 RFC4P35249 363 aa22.68■■□□□ 1.22
CSF1-207ENST00000525659 SRP68Q9UHB9 627 aaKnown RBP22.68■■□□□ 1.22
CSF1-207ENST00000525659 KDM6AO15550 1401 aaPredicted RBP22.67■■□□□ 1.22
CSF1-207ENST00000525659 FKBP8Q14318 412 aa22.67■■□□□ 1.22
CSF1-207ENST00000525659 RC3H1Q5TC82 1133 aaKnown RBP22.67■■□□□ 1.22
CSF1-207ENST00000525659 CNTNAP4Q9C0A0 1308 aa22.66■■□□□ 1.22
CSF1-207ENST00000525659 VEGFAP15692 232 aaPredicted RBP22.66■■□□□ 1.22
CSF1-207ENST00000525659 RBM42Q9BTD8 480 aaKnown RBP22.66■■□□□ 1.22
CSF1-207ENST00000525659 KIF24Q5T7B8 1368 aa22.65■■□□□ 1.22
CSF1-207ENST00000525659 GLTPD2A6NH11 291 aa22.65■■□□□ 1.22
CSF1-207ENST00000525659 POTECB2RU33 542 aa22.65■■□□□ 1.22
CSF1-207ENST00000525659 ZNF831Q5JPB2 1677 aa22.64■■□□□ 1.21
CSF1-207ENST00000525659 TONSLQ96HA7 1378 aa22.63■■□□□ 1.21
CSF1-207ENST00000525659 ST20-MTHFSA0A0A6YYL1 179 aa22.63■■□□□ 1.21
CSF1-207ENST00000525659 IFNL2Q8IZJ0 200 aa22.63■■□□□ 1.21
CSF1-207ENST00000525659 EYA1Q99502 592 aa22.63■■□□□ 1.21
CSF1-207ENST00000525659 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.63■■□□□ 1.21
CSF1-207ENST00000525659 FOXN1O15353 648 aa22.62■■□□□ 1.21
CSF1-207ENST00000525659 ZC3H4Q9UPT8 1303 aaKnown RBP22.61■■□□□ 1.21
CSF1-207ENST00000525659 MKRN1Q9UHC7 482 aaKnown RBP22.61■■□□□ 1.21
CSF1-207ENST00000525659 KIF20BQ96Q89 1820 aa22.6■■□□□ 1.21
CSF1-207ENST00000525659 USP42Q9H9J4 1324 aaKnown RBP22.59■■□□□ 1.21
CSF1-207ENST00000525659 POLRMTO00411 1230 aaKnown RBP22.59■■□□□ 1.21
CSF1-207ENST00000525659 PPM1GO15355 546 aaPredicted RBP22.58■■□□□ 1.21
CSF1-207ENST00000525659 LMNB1P20700 586 aa22.58■■□□□ 1.21
CSF1-207ENST00000525659 TIAM2Q8IVF5 1701 aa22.57■■□□□ 1.2
CSF1-207ENST00000525659 TM4SF1P30408 202 aa22.57■■□□□ 1.2
CSF1-207ENST00000525659 ADAMTS7Q9UKP4 1686 aa22.56■■□□□ 1.2
CSF1-207ENST00000525659 CRKLP46109 303 aaKnown RBP22.56■■□□□ 1.2
CSF1-207ENST00000525659 CCDC88AQ3V6T2 1871 aa22.55■■□□□ 1.2
CSF1-207ENST00000525659 ANKRD26Q9UPS8 1709 aa22.54■■□□□ 1.2
CSF1-207ENST00000525659 ERVV-2B6SEH9 535 aa22.54■■□□□ 1.2
CSF1-207ENST00000525659 NFKBIEO00221 500 aa22.54■■□□□ 1.2
CSF1-207ENST00000525659 POTEIP0CG38 1075 aa22.54■■□□□ 1.2
CSF1-207ENST00000525659 POTEJP0CG39 1038 aa22.54■■□□□ 1.2
CSF1-207ENST00000525659 PRDM10Q9NQV6 1147 aa22.54■■□□□ 1.2
CSF1-207ENST00000525659 CREBZFQ9NS37 354 aa22.54■■□□□ 1.2
CSF1-207ENST00000525659 WASHC2AQ641Q2 1341 aa22.54■■□□□ 1.2
CSF1-207ENST00000525659 CARD14Q9BXL6 1004 aa22.53■■□□□ 1.2
CSF1-207ENST00000525659 PTCD1O75127 700 aaKnown RBP22.52■■□□□ 1.2
CSF1-207ENST00000525659 FAM161AQ3B820 660 aa22.52■■□□□ 1.2
CSF1-207ENST00000525659 INTS5Q6P9B9 1019 aaKnown RBP22.5■■□□□ 1.19
CSF1-207ENST00000525659 TJP1Q07157 1748 aa22.5■■□□□ 1.19
CSF1-207ENST00000525659 AFDNP55196 1824 aaKnown RBP22.5■■□□□ 1.19
CSF1-207ENST00000525659 CNTNAP1P78357 1384 aa22.5■■□□□ 1.19
CSF1-207ENST00000525659 DLEC1Q9Y238 1755 aa22.48■■□□□ 1.19
CSF1-207ENST00000525659 USPL1Q5W0Q7 1092 aa22.48■■□□□ 1.19
CSF1-207ENST00000525659 CHADLQ6NUI6 762 aa22.48■■□□□ 1.19
CSF1-207ENST00000525659 EIF4A2Q14240 407 aaKnown RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms