RNA–Protein interactions for RNA: ENST00000525554.1

IFITM1-203, Transcript of interferon induced transmembrane protein 1, humanhuman

TSL 3

Gene IFITM1, Length 80 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM1-203ENST00000525554 LINC00116Q8NCU8 138 aa18.72■□□□□ 0.59
IFITM1-203ENST00000525554 ITPK1Q13572 414 aa18.7■□□□□ 0.58
IFITM1-203ENST00000525554 UBR3Q6ZT12 1888 aa18.69■□□□□ 0.58
IFITM1-203ENST00000525554 PHF14O94880 888 aa18.69■□□□□ 0.58
IFITM1-203ENST00000525554 YBX3P16989 372 aaKnown RBP eCLIP18.69■□□□□ 0.58
IFITM1-203ENST00000525554 RC3H1Q5TC82 1133 aaKnown RBP18.69■□□□□ 0.58
IFITM1-203ENST00000525554 AMIGO3Q86WK7 504 aa18.69■□□□□ 0.58
IFITM1-203ENST00000525554 GNPATO15228 680 aa18.68■□□□□ 0.58
IFITM1-203ENST00000525554 ZNF530Q6P9A1 599 aaPredicted RBP18.68■□□□□ 0.58
IFITM1-203ENST00000525554 ADRA2BP18089 450 aa18.67■□□□□ 0.58
IFITM1-203ENST00000525554 MTHFSP49914 203 aa18.67■□□□□ 0.58
IFITM1-203ENST00000525554 CABP4P57796 275 aa18.67■□□□□ 0.58
IFITM1-203ENST00000525554 AMER1Q5JTC6 1135 aaPredicted RBP18.67■□□□□ 0.58
IFITM1-203ENST00000525554 C1orf141Q5JVX7 400 aa18.67■□□□□ 0.58
IFITM1-203ENST00000525554 KDRP35968 1356 aa18.67■□□□□ 0.58
IFITM1-203ENST00000525554 ZNF831Q5JPB2 1677 aa18.66■□□□□ 0.58
IFITM1-203ENST00000525554 IL13P35225 146 aa18.66■□□□□ 0.58
IFITM1-203ENST00000525554 TRAPPC3LQ5T215 181 aa18.66■□□□□ 0.58
IFITM1-203ENST00000525554 RTCBQ9Y3I0 505 aaKnown RBP18.66■□□□□ 0.58
IFITM1-203ENST00000525554 SULT6B1Q6IMI4 303 aa18.65■□□□□ 0.58
IFITM1-203ENST00000525554 NLGN1Q8N2Q7 840 aa18.65■□□□□ 0.58
IFITM1-203ENST00000525554 C1QTNF8P60827 252 aa18.64■□□□□ 0.57
IFITM1-203ENST00000525554 RBM42Q9BTD8 480 aaKnown RBP18.64■□□□□ 0.57
IFITM1-203ENST00000525554 CNTNAP4Q9C0A0 1308 aa18.64■□□□□ 0.57
IFITM1-203ENST00000525554 AEBP1Q8IUX7 1158 aa18.63■□□□□ 0.57
IFITM1-203ENST00000525554 SLC4A9Q96Q91 983 aa18.63■□□□□ 0.57
IFITM1-203ENST00000525554 PER1O15534 1290 aaPredicted RBP18.62■□□□□ 0.57
IFITM1-203ENST00000525554 RPS6KA4O75676 772 aa18.62■□□□□ 0.57
IFITM1-203ENST00000525554 SMIM5Q71RC9 77 aa18.62■□□□□ 0.57
IFITM1-203ENST00000525554 NFATC2IPQ8NCF5 419 aa18.62■□□□□ 0.57
IFITM1-203ENST00000525554 KIF7Q2M1P5 1343 aa18.62■□□□□ 0.57
IFITM1-203ENST00000525554 KDM6AO15550 1401 aaPredicted RBP18.62■□□□□ 0.57
IFITM1-203ENST00000525554 GIGYF1O75420 1035 aaPredicted RBP18.6■□□□□ 0.57
IFITM1-203ENST00000525554 MMP10P09238 476 aa18.6■□□□□ 0.57
IFITM1-203ENST00000525554 AKAP4Q5JQC9 854 aa18.6■□□□□ 0.57
IFITM1-203ENST00000525554 ARHGEF1Q92888 912 aaKnown RBP18.6■□□□□ 0.57
IFITM1-203ENST00000525554 RFC4P35249 363 aa18.59■□□□□ 0.57
IFITM1-203ENST00000525554 TGFB2P61812 414 aa18.59■□□□□ 0.57
IFITM1-203ENST00000525554 PTCD1O75127 700 aaKnown RBP18.57■□□□□ 0.56
IFITM1-203ENST00000525554 GYS1P13807 737 aa18.56■□□□□ 0.56
IFITM1-203ENST00000525554 NPC1L1Q9UHC9 1359 aa18.55■□□□□ 0.56
IFITM1-203ENST00000525554 DIAPH1O60610 1272 aaKnown RBP18.55■□□□□ 0.56
IFITM1-203ENST00000525554 SLC52A2Q9HAB3 445 aa18.55■□□□□ 0.56
IFITM1-203ENST00000525554 COL5A3P25940 1745 aaPredicted RBP18.54■□□□□ 0.56
IFITM1-203ENST00000525554 CRKLP46109 303 aaKnown RBP18.54■□□□□ 0.56
IFITM1-203ENST00000525554 CCDC87Q9NVE4 849 aa18.54■□□□□ 0.56
IFITM1-203ENST00000525554 PARP3Q9Y6F1 533 aa18.54■□□□□ 0.56
IFITM1-203ENST00000525554 ATP10DQ9P241 1426 aa18.52■□□□□ 0.56
IFITM1-203ENST00000525554 SENP3-EIF4A1A0A087X0R7 540 aa18.52■□□□□ 0.56
IFITM1-203ENST00000525554 GPBP1L1Q9HC44 474 aaPredicted RBP18.52■□□□□ 0.56
IFITM1-203ENST00000525554 ADCY9O60503 1353 aa18.52■□□□□ 0.55
IFITM1-203ENST00000525554 KIF13BQ9NQT8 1826 aa18.51■□□□□ 0.55
IFITM1-203ENST00000525554 SCN11AQ9UI33 1791 aa18.51■□□□□ 0.55
IFITM1-203ENST00000525554 RNMTO43148 476 aaKnown RBP18.51■□□□□ 0.55
IFITM1-203ENST00000525554 CC2D1BQ5T0F9 858 aaKnown RBP18.51■□□□□ 0.55
IFITM1-203ENST00000525554 LGR6Q9HBX8 967 aa18.51■□□□□ 0.55
IFITM1-203ENST00000525554 CICQ96RK0 1608 aaPredicted RBP18.51■□□□□ 0.55
IFITM1-203ENST00000525554 MYH14Q7Z406 1995 aaKnown RBP18.51■□□□□ 0.55
IFITM1-203ENST00000525554 C10orf71Q711Q0 1435 aa18.5■□□□□ 0.55
IFITM1-203ENST00000525554 HMOX1P09601 288 aa18.5■□□□□ 0.55
IFITM1-203ENST00000525554 INTS5Q6P9B9 1019 aaKnown RBP18.5■□□□□ 0.55
IFITM1-203ENST00000525554 VSIG10Q8N0Z9 540 aa18.5■□□□□ 0.55
IFITM1-203ENST00000525554 USP42Q9H9J4 1324 aaKnown RBP18.49■□□□□ 0.55
IFITM1-203ENST00000525554 MTHFSDQ2M296 383 aaKnown RBP18.49■□□□□ 0.55
IFITM1-203ENST00000525554 PXDNLA1KZ92 1463 aa18.49■□□□□ 0.55
IFITM1-203ENST00000525554 MRC1P22897 1456 aa18.48■□□□□ 0.55
IFITM1-203ENST00000525554 A0A0G2JLW4 131 aa18.48■□□□□ 0.55
IFITM1-203ENST00000525554 C4AP0C0L4 1744 aa18.47■□□□□ 0.55
IFITM1-203ENST00000525554 ZPR1O75312 459 aa18.46■□□□□ 0.55
IFITM1-203ENST00000525554 CYP19A1P11511 503 aaPredicted RBP18.46■□□□□ 0.55
IFITM1-203ENST00000525554 DPEP1P16444 411 aa18.46■□□□□ 0.55
IFITM1-203ENST00000525554 DNAJC10Q8IXB1 793 aa18.46■□□□□ 0.55
IFITM1-203ENST00000525554 BCS1LQ9Y276 419 aa18.46■□□□□ 0.55
IFITM1-203ENST00000525554 TM4SF1P30408 202 aa18.45■□□□□ 0.54
IFITM1-203ENST00000525554 FKBP8Q14318 412 aa18.45■□□□□ 0.54
IFITM1-203ENST00000525554 SRP68Q9UHB9 627 aaKnown RBP18.45■□□□□ 0.54
IFITM1-203ENST00000525554 WWC3Q9ULE0 1092 aa18.45■□□□□ 0.54
IFITM1-203ENST00000525554 ADAMTS7Q9UKP4 1686 aa18.44■□□□□ 0.54
IFITM1-203ENST00000525554 TJP1Q07157 1748 aa18.44■□□□□ 0.54
IFITM1-203ENST00000525554 KCNA3P22001 575 aa18.44■□□□□ 0.54
IFITM1-203ENST00000525554 SLC39A6Q13433 755 aa18.44■□□□□ 0.54
IFITM1-203ENST00000525554 GAS2L2Q8NHY3 880 aa18.44■□□□□ 0.54
IFITM1-203ENST00000525554 PIM2Q9P1W9 311 aa18.44■□□□□ 0.54
IFITM1-203ENST00000525554 SOS1Q07889 1333 aaPredicted RBP18.44■□□□□ 0.54
IFITM1-203ENST00000525554 FCHSD2O94868 740 aa18.43■□□□□ 0.54
IFITM1-203ENST00000525554 TEX13AQ9BXU3 409 aaPredicted RBP18.43■□□□□ 0.54
IFITM1-203ENST00000525554 NARFQ9UHQ1 456 aa18.43■□□□□ 0.54
IFITM1-203ENST00000525554 KIAA1551Q9HCM1 1747 aa18.43■□□□□ 0.54
IFITM1-203ENST00000525554 GNAT3A8MTJ3 354 aa18.42■□□□□ 0.54
IFITM1-203ENST00000525554 U2SURPO15042 1029 aaKnown RBP18.42■□□□□ 0.54
IFITM1-203ENST00000525554 STARD3NLO95772 234 aa18.42■□□□□ 0.54
IFITM1-203ENST00000525554 DDR1Q08345 913 aa18.42■□□□□ 0.54
IFITM1-203ENST00000525554 ARHGAP27Q6ZUM4 889 aa18.42■□□□□ 0.54
IFITM1-203ENST00000525554 TTC5Q8N0Z6 440 aa18.42■□□□□ 0.54
IFITM1-203ENST00000525554 CFAP53Q96M91 514 aa18.42■□□□□ 0.54
IFITM1-203ENST00000525554 POLRMTO00411 1230 aaKnown RBP18.41■□□□□ 0.54
IFITM1-203ENST00000525554 TEFQ10587 303 aa18.41■□□□□ 0.54
IFITM1-203ENST00000525554 USPL1Q5W0Q7 1092 aa18.41■□□□□ 0.54
IFITM1-203ENST00000525554 COL3A1P02461 1466 aaPredicted RBP18.4■□□□□ 0.54
IFITM1-203ENST00000525554 N4BP2Q86UW6 1770 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms