RNA–Protein interactions for RNA: ENST00000525495.6

CDC27-202, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 1,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-202ENST00000525495 ATG3Q9NT62 314 aa15.93■□□□□ 0.14
CDC27-202ENST00000525495 ADAMTS7Q9UKP4 1686 aa15.92■□□□□ 0.14
CDC27-202ENST00000525495 AKAP4Q5JQC9 854 aa15.92■□□□□ 0.14
CDC27-202ENST00000525495 ZBTB7AO95365 584 aa15.91■□□□□ 0.14
CDC27-202ENST00000525495 RSPH6AQ9H0K4 717 aa15.91■□□□□ 0.14
CDC27-202ENST00000525495 LGR6Q9HBX8 967 aa15.91■□□□□ 0.14
CDC27-202ENST00000525495 DSG3P32926 999 aa15.91■□□□□ 0.14
CDC27-202ENST00000525495 CABP4P57796 275 aa15.91■□□□□ 0.14
CDC27-202ENST00000525495 PHACTR3Q96KR7 559 aa15.91■□□□□ 0.14
CDC27-202ENST00000525495 SPINK5Q9NQ38 1064 aaPredicted RBP15.91■□□□□ 0.14
CDC27-202ENST00000525495 NUDCQ9Y266 331 aa15.91■□□□□ 0.14
CDC27-202ENST00000525495 C4BP0C0L5 1744 aa15.9■□□□□ 0.14
CDC27-202ENST00000525495 LOC102724428A0A0B4J2F2 783 aa15.9■□□□□ 0.14
CDC27-202ENST00000525495 CAPN15O75808 1086 aa15.9■□□□□ 0.14
CDC27-202ENST00000525495 U2AF1L5P0DN76 240 aaPredicted RBP15.9■□□□□ 0.14
CDC27-202ENST00000525495 PRKAR2BP31323 418 aa15.9■□□□□ 0.14
CDC27-202ENST00000525495 SIK1P57059 783 aa15.9■□□□□ 0.14
CDC27-202ENST00000525495 U2AF1Q01081 240 aaKnown RBP eCLIP15.9■□□□□ 0.14
CDC27-202ENST00000525495 NFATC2IPQ8NCF5 419 aa15.9■□□□□ 0.14
CDC27-202ENST00000525495 SPON1Q9HCB6 807 aa15.9■□□□□ 0.14
CDC27-202ENST00000525495 PNPLA7Q6ZV29 1317 aa15.9■□□□□ 0.14
CDC27-202ENST00000525495 MRC1P22897 1456 aa15.89■□□□□ 0.13
CDC27-202ENST00000525495 RNMTO43148 476 aaKnown RBP15.89■□□□□ 0.13
CDC27-202ENST00000525495 RALBP1Q15311 655 aa15.89■□□□□ 0.13
CDC27-202ENST00000525495 SLC4A9Q96Q91 983 aa15.89■□□□□ 0.13
CDC27-202ENST00000525495 TFCP2L1Q9NZI6 479 aa15.89■□□□□ 0.13
CDC27-202ENST00000525495 ITPK1Q13572 414 aa15.88■□□□□ 0.13
CDC27-202ENST00000525495 ATF5Q9Y2D1 282 aaPredicted RBP15.88■□□□□ 0.13
CDC27-202ENST00000525495 ZNF831Q5JPB2 1677 aa15.88■□□□□ 0.13
CDC27-202ENST00000525495 PTGER2P43116 358 aa15.87■□□□□ 0.13
CDC27-202ENST00000525495 UBR3Q6ZT12 1888 aa15.87■□□□□ 0.13
CDC27-202ENST00000525495 AMIGO3Q86WK7 504 aa15.87■□□□□ 0.13
CDC27-202ENST00000525495 LINC00116Q8NCU8 138 aa15.87■□□□□ 0.13
CDC27-202ENST00000525495 SLC52A2Q9HAB3 445 aa15.87■□□□□ 0.13
CDC27-202ENST00000525495 MAP3K5Q99683 1374 aa15.86■□□□□ 0.13
CDC27-202ENST00000525495 ATP6V1AP38606 617 aa15.86■□□□□ 0.13
CDC27-202ENST00000525495 GAS2L2Q8NHY3 880 aa15.86■□□□□ 0.13
CDC27-202ENST00000525495 COL5A3P25940 1745 aaPredicted RBP15.86■□□□□ 0.13
CDC27-202ENST00000525495 FCHSD2O94868 740 aa15.85■□□□□ 0.13
CDC27-202ENST00000525495 MTFR1LQ9H019 292 aa15.85■□□□□ 0.13
CDC27-202ENST00000525495 SIPA1L3O60292 1781 aaPredicted RBP15.85■□□□□ 0.13
CDC27-202ENST00000525495 COL24A1Q17RW2 1714 aa15.85■□□□□ 0.13
CDC27-202ENST00000525495 SMIM5Q71RC9 77 aa15.84■□□□□ 0.13
CDC27-202ENST00000525495 COL23A1Q86Y22 540 aaPredicted RBP15.84■□□□□ 0.13
CDC27-202ENST00000525495 IL17REQ8NFR9 667 aa15.84■□□□□ 0.13
CDC27-202ENST00000525495 SGIP1Q9BQI5 828 aa15.84■□□□□ 0.13
CDC27-202ENST00000525495 RBM42Q9BTD8 480 aaKnown RBP15.84■□□□□ 0.13
CDC27-202ENST00000525495 MYBBP1AQ9BQG0 1328 aaKnown RBP15.84■□□□□ 0.13
CDC27-202ENST00000525495 GNAT3A8MTJ3 354 aa15.84■□□□□ 0.13
CDC27-202ENST00000525495 PTCD1O75127 700 aaKnown RBP15.84■□□□□ 0.13
CDC27-202ENST00000525495 KCNA4P22459 653 aa15.84■□□□□ 0.13
CDC27-202ENST00000525495 TJP1Q07157 1748 aa15.83■□□□□ 0.13
CDC27-202ENST00000525495 SLC39A6Q13433 755 aa15.83■□□□□ 0.12
CDC27-202ENST00000525495 CICQ96RK0 1608 aaPredicted RBP15.82■□□□□ 0.12
CDC27-202ENST00000525495 MYH14Q7Z406 1995 aaKnown RBP15.82■□□□□ 0.12
CDC27-202ENST00000525495 DLG5Q8TDM6 1919 aa15.82■□□□□ 0.12
CDC27-202ENST00000525495 SLC16A10Q8TF71 515 aa15.82■□□□□ 0.12
CDC27-202ENST00000525495 AK7Q96M32 723 aa15.82■□□□□ 0.12
CDC27-202ENST00000525495 PRKRIP1Q9H875 184 aaPredicted RBP15.82■□□□□ 0.12
CDC27-202ENST00000525495 UBR2Q8IWV8 1755 aa15.81■□□□□ 0.12
CDC27-202ENST00000525495 KCPQ6ZWJ8 1503 aa15.81■□□□□ 0.12
CDC27-202ENST00000525495 ZNF316A6NFI3 1004 aaPredicted RBP15.81■□□□□ 0.12
CDC27-202ENST00000525495 PLEKHF1Q96S99 279 aa15.81■□□□□ 0.12
CDC27-202ENST00000525495 PPP1R1BQ9UD71 204 aaPredicted RBP15.81■□□□□ 0.12
CDC27-202ENST00000525495 CEMIPQ8WUJ3 1361 aa15.81■□□□□ 0.12
CDC27-202ENST00000525495 PHF14O94880 888 aa15.8■□□□□ 0.12
CDC27-202ENST00000525495 HMGB2P26583 209 aaKnown RBP15.8■□□□□ 0.12
CDC27-202ENST00000525495 GNPATO15228 680 aa15.79■□□□□ 0.12
CDC27-202ENST00000525495 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.78■□□□□ 0.12
CDC27-202ENST00000525495 SSFA2P28290 1259 aa15.78■□□□□ 0.12
CDC27-202ENST00000525495 TEFQ10587 303 aa15.78■□□□□ 0.12
CDC27-202ENST00000525495 DCTN1Q14203 1278 aa15.78■□□□□ 0.12
CDC27-202ENST00000525495 MSL1Q68DK7 614 aa15.78■□□□□ 0.12
CDC27-202ENST00000525495 MCM10Q7L590 875 aa15.78■□□□□ 0.12
CDC27-202ENST00000525495 FLAD1Q8NFF5 587 aa15.78■□□□□ 0.12
CDC27-202ENST00000525495 CNTNAP4Q9C0A0 1308 aa15.77■□□□□ 0.12
CDC27-202ENST00000525495 SLC4A2P04920 1241 aa15.76■□□□□ 0.11
CDC27-202ENST00000525495 RC3H1Q5TC82 1133 aaKnown RBP15.76■□□□□ 0.11
CDC27-202ENST00000525495 DNAJC10Q8IXB1 793 aa15.76■□□□□ 0.11
CDC27-202ENST00000525495 ARXQ96QS3 562 aa15.76■□□□□ 0.11
CDC27-202ENST00000525495 C4AP0C0L4 1744 aa15.76■□□□□ 0.11
CDC27-202ENST00000525495 CRKLP46109 303 aaKnown RBP15.75■□□□□ 0.11
CDC27-202ENST00000525495 ZNF790Q6PG37 636 aa15.75■□□□□ 0.11
CDC27-202ENST00000525495 FHDC1Q9C0D6 1143 aaPredicted RBP15.75■□□□□ 0.11
CDC27-202ENST00000525495 KCNQ3O43525 872 aa15.74■□□□□ 0.11
CDC27-202ENST00000525495 RTF1Q92541 710 aaKnown RBP15.74■□□□□ 0.11
CDC27-202ENST00000525495 ZNF496Q96IT1 587 aaPredicted RBP15.74■□□□□ 0.11
CDC27-202ENST00000525495 RTCBQ9Y3I0 505 aaKnown RBP15.74■□□□□ 0.11
CDC27-202ENST00000525495 HTATSF1O43719 755 aaKnown RBP15.73■□□□□ 0.11
CDC27-202ENST00000525495 RPS6KA4O75676 772 aa15.73■□□□□ 0.11
CDC27-202ENST00000525495 NEFMP07197 916 aa15.73■□□□□ 0.11
CDC27-202ENST00000525495 POLD1P28340 1107 aa15.73■□□□□ 0.11
CDC27-202ENST00000525495 NFE2L2Q16236 605 aa15.73■□□□□ 0.11
CDC27-202ENST00000525495 INTS5Q6P9B9 1019 aaKnown RBP15.73■□□□□ 0.11
CDC27-202ENST00000525495 TTC5Q8N0Z6 440 aa15.73■□□□□ 0.11
CDC27-202ENST00000525495 BTBD11A6QL63 1104 aa15.72■□□□□ 0.11
CDC27-202ENST00000525495 CYP19A1P11511 503 aaPredicted RBP15.72■□□□□ 0.11
CDC27-202ENST00000525495 ARHGEF1Q92888 912 aaKnown RBP15.72■□□□□ 0.11
CDC27-202ENST00000525495 SYT17Q9BSW7 474 aa15.72■□□□□ 0.11
CDC27-202ENST00000525495 MAPK8IP3Q9UPT6 1336 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms