RNA–Protein interactions for RNA: ENST00000525395.2

LRRK1-203, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-203ENST00000525395 KDRP35968 1356 aa12.91□□□□□ -0.34
LRRK1-203ENST00000525395 C4BP0C0L5 1744 aa12.91□□□□□ -0.34
LRRK1-203ENST00000525395 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.9□□□□□ -0.34
LRRK1-203ENST00000525395 AMOTQ4VCS5 1084 aa12.9□□□□□ -0.34
LRRK1-203ENST00000525395 AK7Q96M32 723 aa12.9□□□□□ -0.34
LRRK1-203ENST00000525395 LGR6Q9HBX8 967 aa12.9□□□□□ -0.34
LRRK1-203ENST00000525395 MAP3K5Q99683 1374 aa12.9□□□□□ -0.34
LRRK1-203ENST00000525395 DCAF8L1A6NGE4 600 aa12.89□□□□□ -0.35
LRRK1-203ENST00000525395 CABP4P57796 275 aa12.89□□□□□ -0.35
LRRK1-203ENST00000525395 NFATC2IPQ8NCF5 419 aa12.89□□□□□ -0.35
LRRK1-203ENST00000525395 RBM42Q9BTD8 480 aaKnown RBP12.89□□□□□ -0.35
LRRK1-203ENST00000525395 HSP90AB1P08238 724 aaKnown RBP12.88□□□□□ -0.35
LRRK1-203ENST00000525395 PLEKHG2Q9H7P9 1386 aa12.88□□□□□ -0.35
LRRK1-203ENST00000525395 GNPATO15228 680 aa12.87□□□□□ -0.35
LRRK1-203ENST00000525395 DIAPH1O60610 1272 aaKnown RBP12.87□□□□□ -0.35
LRRK1-203ENST00000525395 PTCD1O75127 700 aaKnown RBP12.87□□□□□ -0.35
LRRK1-203ENST00000525395 MTHFSDQ2M296 383 aaKnown RBP12.87□□□□□ -0.35
LRRK1-203ENST00000525395 C1orf141Q5JVX7 400 aa12.87□□□□□ -0.35
LRRK1-203ENST00000525395 PELP1Q8IZL8 1130 aaKnown RBP12.87□□□□□ -0.35
LRRK1-203ENST00000525395 FLAD1Q8NFF5 587 aa12.87□□□□□ -0.35
LRRK1-203ENST00000525395 UBR3Q6ZT12 1888 aa12.87□□□□□ -0.35
LRRK1-203ENST00000525395 GPR162Q16538 588 aa12.86□□□□□ -0.35
LRRK1-203ENST00000525395 GOLGB1Q14789 3259 aaKnown RBP12.86□□□□□ -0.35
LRRK1-203ENST00000525395 COL3A1P02461 1466 aaPredicted RBP12.85□□□□□ -0.35
LRRK1-203ENST00000525395 NPC1L1Q9UHC9 1359 aa12.85□□□□□ -0.35
LRRK1-203ENST00000525395 YBX3P16989 372 aaKnown RBP eCLIP12.85□□□□□ -0.35
LRRK1-203ENST00000525395 SSFA2P28290 1259 aa12.85□□□□□ -0.35
LRRK1-203ENST00000525395 AKAP4Q5JQC9 854 aa12.85□□□□□ -0.35
LRRK1-203ENST00000525395 RNMTO43148 476 aaKnown RBP12.84□□□□□ -0.35
LRRK1-203ENST00000525395 SLC39A6Q13433 755 aa12.84□□□□□ -0.35
LRRK1-203ENST00000525395 ARHGEF1Q92888 912 aaKnown RBP12.83□□□□□ -0.36
LRRK1-203ENST00000525395 SLC52A2Q9HAB3 445 aa12.83□□□□□ -0.36
LRRK1-203ENST00000525395 U2SURPO15042 1029 aaKnown RBP12.82□□□□□ -0.36
LRRK1-203ENST00000525395 RPS6KA4O75676 772 aa12.82□□□□□ -0.36
LRRK1-203ENST00000525395 HMGB2P26583 209 aaKnown RBP12.82□□□□□ -0.36
LRRK1-203ENST00000525395 TRAPPC3LQ5T215 181 aa12.82□□□□□ -0.36
LRRK1-203ENST00000525395 RC3H1Q5TC82 1133 aaKnown RBP12.82□□□□□ -0.36
LRRK1-203ENST00000525395 WWC3Q9ULE0 1092 aa12.82□□□□□ -0.36
LRRK1-203ENST00000525395 RTCBQ9Y3I0 505 aaKnown RBP12.82□□□□□ -0.36
LRRK1-203ENST00000525395 ZEB1P37275 1124 aaPredicted RBP12.81□□□□□ -0.36
LRRK1-203ENST00000525395 CRKLP46109 303 aaKnown RBP12.81□□□□□ -0.36
LRRK1-203ENST00000525395 ZNF784Q8NCA9 323 aaPredicted RBP12.81□□□□□ -0.36
LRRK1-203ENST00000525395 CD2APQ9Y5K6 639 aa12.81□□□□□ -0.36
LRRK1-203ENST00000525395 MYH14Q7Z406 1995 aaKnown RBP12.81□□□□□ -0.36
LRRK1-203ENST00000525395 CNTNAP4Q9C0A0 1308 aa12.81□□□□□ -0.36
LRRK1-203ENST00000525395 SCN11AQ9UI33 1791 aa12.81□□□□□ -0.36
LRRK1-203ENST00000525395 MMP10P09238 476 aa12.8□□□□□ -0.36
LRRK1-203ENST00000525395 PPP2R1AP30153 589 aa12.8□□□□□ -0.36
LRRK1-203ENST00000525395 INTS5Q6P9B9 1019 aaKnown RBP12.8□□□□□ -0.36
LRRK1-203ENST00000525395 DNAJC10Q8IXB1 793 aa12.8□□□□□ -0.36
LRRK1-203ENST00000525395 IL17REQ8NFR9 667 aa12.8□□□□□ -0.36
LRRK1-203ENST00000525395 PHACTR3Q96KR7 559 aa12.8□□□□□ -0.36
LRRK1-203ENST00000525395 COL5A3P25940 1745 aaPredicted RBP12.79□□□□□ -0.36
LRRK1-203ENST00000525395 GYS1P13807 737 aa12.79□□□□□ -0.36
LRRK1-203ENST00000525395 SRP68Q9UHB9 627 aaKnown RBP12.79□□□□□ -0.36
LRRK1-203ENST00000525395 ZNF831Q5JPB2 1677 aa12.79□□□□□ -0.36
LRRK1-203ENST00000525395 TJP1Q07157 1748 aa12.77□□□□□ -0.36
LRRK1-203ENST00000525395 CYP19A1P11511 503 aaPredicted RBP12.77□□□□□ -0.37
LRRK1-203ENST00000525395 RFC4P35249 363 aa12.77□□□□□ -0.37
LRRK1-203ENST00000525395 RSPH6AQ9H0K4 717 aa12.77□□□□□ -0.37
LRRK1-203ENST00000525395 ADAMTS7Q9UKP4 1686 aa12.77□□□□□ -0.37
LRRK1-203ENST00000525395 ADRA2BP18089 450 aa12.76□□□□□ -0.37
LRRK1-203ENST00000525395 PRKAR2BP31323 418 aa12.76□□□□□ -0.37
LRRK1-203ENST00000525395 FKBP8Q14318 412 aa12.76□□□□□ -0.37
LRRK1-203ENST00000525395 NLGN1Q8N2Q7 840 aa12.76□□□□□ -0.37
LRRK1-203ENST00000525395 MRC1P22897 1456 aa12.76□□□□□ -0.37
LRRK1-203ENST00000525395 KCPQ6ZWJ8 1503 aa12.76□□□□□ -0.37
LRRK1-203ENST00000525395 GNAT3A8MTJ3 354 aa12.75□□□□□ -0.37
LRRK1-203ENST00000525395 KCNQ3O43525 872 aa12.75□□□□□ -0.37
LRRK1-203ENST00000525395 CHD4Q14839 1912 aa12.74□□□□□ -0.37
LRRK1-203ENST00000525395 USP42Q9H9J4 1324 aaKnown RBP12.74□□□□□ -0.37
LRRK1-203ENST00000525395 A0A0G2JLW4 131 aa12.74□□□□□ -0.37
LRRK1-203ENST00000525395 DDR1Q08345 913 aa12.74□□□□□ -0.37
LRRK1-203ENST00000525395 CCDC87Q9NVE4 849 aa12.74□□□□□ -0.37
LRRK1-203ENST00000525395 ZBTB1Q9Y2K1 713 aa12.74□□□□□ -0.37
LRRK1-203ENST00000525395 VIRMAQ69YN4 1812 aaKnown RBP12.74□□□□□ -0.37
LRRK1-203ENST00000525395 GRIN3BO60391 1043 aa12.73□□□□□ -0.37
LRRK1-203ENST00000525395 U2AF1L5P0DN76 240 aaPredicted RBP12.73□□□□□ -0.37
LRRK1-203ENST00000525395 U2AF1Q01081 240 aaKnown RBP eCLIP12.73□□□□□ -0.37
LRRK1-203ENST00000525395 USPL1Q5W0Q7 1092 aa12.73□□□□□ -0.37
LRRK1-203ENST00000525395 GAS2L2Q8NHY3 880 aa12.73□□□□□ -0.37
LRRK1-203ENST00000525395 ZNF496Q96IT1 587 aaPredicted RBP12.73□□□□□ -0.37
LRRK1-203ENST00000525395 CFAP53Q96M91 514 aa12.73□□□□□ -0.37
LRRK1-203ENST00000525395 C4AP0C0L4 1744 aa12.73□□□□□ -0.37
LRRK1-203ENST00000525395 CICQ96RK0 1608 aaPredicted RBP12.73□□□□□ -0.37
LRRK1-203ENST00000525395 SOS1Q07889 1333 aaPredicted RBP12.72□□□□□ -0.37
LRRK1-203ENST00000525395 KCNA3P22001 575 aa12.72□□□□□ -0.37
LRRK1-203ENST00000525395 TM4SF1P30408 202 aa12.72□□□□□ -0.37
LRRK1-203ENST00000525395 BCL2L12Q9HB09 334 aa12.72□□□□□ -0.37
LRRK1-203ENST00000525395 PXDNLA1KZ92 1463 aa12.72□□□□□ -0.37
LRRK1-203ENST00000525395 DPEP1P16444 411 aa12.71□□□□□ -0.37
LRRK1-203ENST00000525395 CANXP27824 592 aaKnown RBP12.71□□□□□ -0.37
LRRK1-203ENST00000525395 TEFQ10587 303 aa12.71□□□□□ -0.37
LRRK1-203ENST00000525395 DCTN1Q14203 1278 aa12.71□□□□□ -0.37
LRRK1-203ENST00000525395 ZNF790Q6PG37 636 aa12.71□□□□□ -0.37
LRRK1-203ENST00000525395 MCM10Q7L590 875 aa12.71□□□□□ -0.37
LRRK1-203ENST00000525395 NUDCQ9Y266 331 aa12.71□□□□□ -0.37
LRRK1-203ENST00000525395 PARP3Q9Y6F1 533 aa12.71□□□□□ -0.37
LRRK1-203ENST00000525395 KIAA1551Q9HCM1 1747 aa12.71□□□□□ -0.38
LRRK1-203ENST00000525395 C10orf71Q711Q0 1435 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms