RNA–Protein interactions for RNA: ENST00000524627.5

SF3B2-203, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-203ENST00000524627 ATG3Q9NT62 314 aa17.61■□□□□ 0.41
SF3B2-203ENST00000524627 MMP10P09238 476 aa17.6■□□□□ 0.41
SF3B2-203ENST00000524627 TRIM26Q12899 539 aaPredicted RBP17.6■□□□□ 0.41
SF3B2-203ENST00000524627 KDRP35968 1356 aa17.57■□□□□ 0.4
SF3B2-203ENST00000524627 RBM42Q9BTD8 480 aaKnown RBP17.57■□□□□ 0.4
SF3B2-203ENST00000524627 RTCBQ9Y3I0 505 aaKnown RBP17.57■□□□□ 0.4
SF3B2-203ENST00000524627 TRAPPC3LQ5T215 181 aa17.56■□□□□ 0.4
SF3B2-203ENST00000524627 SLC4A9Q96Q91 983 aa17.56■□□□□ 0.4
SF3B2-203ENST00000524627 CICQ96RK0 1608 aaPredicted RBP17.56■□□□□ 0.4
SF3B2-203ENST00000524627 PXDNLA1KZ92 1463 aa17.56■□□□□ 0.4
SF3B2-203ENST00000524627 ERVV-2B6SEH9 535 aa17.55■□□□□ 0.4
SF3B2-203ENST00000524627 HSPA6P17066 643 aa17.55■□□□□ 0.4
SF3B2-203ENST00000524627 PLEKHG2Q9H7P9 1386 aa17.54■□□□□ 0.4
SF3B2-203ENST00000524627 HSP90AB1P08238 724 aaKnown RBP17.54■□□□□ 0.4
SF3B2-203ENST00000524627 DCAF5Q96JK2 942 aa17.54■□□□□ 0.4
SF3B2-203ENST00000524627 TIMELESSQ9UNS1 1208 aa17.54■□□□□ 0.4
SF3B2-203ENST00000524627 KIF13BQ9NQT8 1826 aa17.54■□□□□ 0.4
SF3B2-203ENST00000524627 N4BP2Q86UW6 1770 aaPredicted RBP17.53■□□□□ 0.4
SF3B2-203ENST00000524627 PLEKHO1Q53GL0 409 aaPredicted RBP17.53■□□□□ 0.4
SF3B2-203ENST00000524627 IFFO2Q5TF58 517 aa17.53■□□□□ 0.4
SF3B2-203ENST00000524627 ZNF530Q6P9A1 599 aaPredicted RBP17.53■□□□□ 0.4
SF3B2-203ENST00000524627 NLGN1Q8N2Q7 840 aa17.53■□□□□ 0.4
SF3B2-203ENST00000524627 ARHGEF1Q92888 912 aaKnown RBP17.53■□□□□ 0.4
SF3B2-203ENST00000524627 BCS1LQ9Y276 419 aa17.53■□□□□ 0.4
SF3B2-203ENST00000524627 KIAA1551Q9HCM1 1747 aa17.52■□□□□ 0.4
SF3B2-203ENST00000524627 A0A0G2JLW4 131 aa17.52■□□□□ 0.4
SF3B2-203ENST00000524627 CABP4P57796 275 aa17.52■□□□□ 0.4
SF3B2-203ENST00000524627 TGFB2P61812 414 aa17.52■□□□□ 0.4
SF3B2-203ENST00000524627 RC3H1Q5TC82 1133 aaKnown RBP17.52■□□□□ 0.4
SF3B2-203ENST00000524627 KDM6AO15550 1401 aaPredicted RBP17.52■□□□□ 0.4
SF3B2-203ENST00000524627 C10orf71Q711Q0 1435 aa17.52■□□□□ 0.4
SF3B2-203ENST00000524627 COL5A3P25940 1745 aaPredicted RBP17.52■□□□□ 0.39
SF3B2-203ENST00000524627 ZNF831Q5JPB2 1677 aa17.52■□□□□ 0.39
SF3B2-203ENST00000524627 CNTNAP4Q9C0A0 1308 aa17.51■□□□□ 0.39
SF3B2-203ENST00000524627 KIF3CO14782 793 aa17.51■□□□□ 0.39
SF3B2-203ENST00000524627 ADRA2BP18089 450 aa17.51■□□□□ 0.39
SF3B2-203ENST00000524627 RFC4P35249 363 aa17.51■□□□□ 0.39
SF3B2-203ENST00000524627 PANK3Q9H999 370 aa17.51■□□□□ 0.39
SF3B2-203ENST00000524627 RPS6KA4O75676 772 aa17.5■□□□□ 0.39
SF3B2-203ENST00000524627 GYS1P13807 737 aa17.5■□□□□ 0.39
SF3B2-203ENST00000524627 CCDC87Q9NVE4 849 aa17.5■□□□□ 0.39
SF3B2-203ENST00000524627 C4AP0C0L4 1744 aa17.5■□□□□ 0.39
SF3B2-203ENST00000524627 PTCD1O75127 700 aaKnown RBP17.49■□□□□ 0.39
SF3B2-203ENST00000524627 DPEP1P16444 411 aa17.49■□□□□ 0.39
SF3B2-203ENST00000524627 AMOTQ4VCS5 1084 aa17.49■□□□□ 0.39
SF3B2-203ENST00000524627 AEBP1Q8IUX7 1158 aa17.49■□□□□ 0.39
SF3B2-203ENST00000524627 PARP3Q9Y6F1 533 aa17.49■□□□□ 0.39
SF3B2-203ENST00000524627 MYH14Q7Z406 1995 aaKnown RBP17.48■□□□□ 0.39
SF3B2-203ENST00000524627 MTHFSP49914 203 aa17.48■□□□□ 0.39
SF3B2-203ENST00000524627 ARHGAP27Q6ZUM4 889 aa17.48■□□□□ 0.39
SF3B2-203ENST00000524627 FCHSD2O94868 740 aa17.47■□□□□ 0.39
SF3B2-203ENST00000524627 C1orf141Q5JVX7 400 aa17.47■□□□□ 0.39
SF3B2-203ENST00000524627 HSPA5P11021 654 aaKnown RBP17.46■□□□□ 0.39
SF3B2-203ENST00000524627 CRKLP46109 303 aaKnown RBP17.46■□□□□ 0.39
SF3B2-203ENST00000524627 EIF4G2P78344 907 aaKnown RBP eCLIP17.46■□□□□ 0.39
SF3B2-203ENST00000524627 MORC1Q86VD1 984 aa17.46■□□□□ 0.39
SF3B2-203ENST00000524627 PCGF6Q9BYE7 350 aa17.46■□□□□ 0.39
SF3B2-203ENST00000524627 NFATC2IPQ8NCF5 419 aa17.45■□□□□ 0.38
SF3B2-203ENST00000524627 SRP68Q9UHB9 627 aaKnown RBP17.45■□□□□ 0.38
SF3B2-203ENST00000524627 BRCA1P38398 1863 aaKnown RBP17.45■□□□□ 0.38
SF3B2-203ENST00000524627 CLSPNQ9HAW4 1339 aa17.45■□□□□ 0.38
SF3B2-203ENST00000524627 SULT6B1Q6IMI4 303 aa17.44■□□□□ 0.38
SF3B2-203ENST00000524627 KCNA3P22001 575 aa17.43■□□□□ 0.38
SF3B2-203ENST00000524627 FKBP8Q14318 412 aa17.43■□□□□ 0.38
SF3B2-203ENST00000524627 TJP1Q07157 1748 aa17.42■□□□□ 0.38
SF3B2-203ENST00000524627 TOMM70O94826 608 aa17.42■□□□□ 0.38
SF3B2-203ENST00000524627 NMRK2Q9NPI5 230 aa17.42■□□□□ 0.38
SF3B2-203ENST00000524627 USP42Q9H9J4 1324 aaKnown RBP17.42■□□□□ 0.38
SF3B2-203ENST00000524627 APLP1P51693 650 aa17.41■□□□□ 0.38
SF3B2-203ENST00000524627 DDR1Q08345 913 aa17.41■□□□□ 0.38
SF3B2-203ENST00000524627 C9orf131Q5VYM1 1079 aa17.41■□□□□ 0.38
SF3B2-203ENST00000524627 PIM2Q9P1W9 311 aa17.41■□□□□ 0.38
SF3B2-203ENST00000524627 ARFGEF1Q9Y6D6 1849 aa17.4■□□□□ 0.38
SF3B2-203ENST00000524627 IL13P35225 146 aa17.4■□□□□ 0.38
SF3B2-203ENST00000524627 DALRD3Q5D0E6 543 aaKnown RBP17.4■□□□□ 0.38
SF3B2-203ENST00000524627 KNSTRNQ9Y448 316 aa17.4■□□□□ 0.38
SF3B2-203ENST00000524627 SCN11AQ9UI33 1791 aa17.4■□□□□ 0.38
SF3B2-203ENST00000524627 INTS5Q6P9B9 1019 aaKnown RBP17.39■□□□□ 0.37
SF3B2-203ENST00000524627 CHRNA5P30532 468 aa17.38■□□□□ 0.37
SF3B2-203ENST00000524627 DNAJC10Q8IXB1 793 aa17.38■□□□□ 0.37
SF3B2-203ENST00000524627 AKAP4Q5JQC9 854 aa17.37■□□□□ 0.37
SF3B2-203ENST00000524627 ADAMTS7Q9UKP4 1686 aa17.36■□□□□ 0.37
SF3B2-203ENST00000524627 POLRMTO00411 1230 aaKnown RBP17.36■□□□□ 0.37
SF3B2-203ENST00000524627 ZPR1O75312 459 aa17.36■□□□□ 0.37
SF3B2-203ENST00000524627 SLC52A2Q9HAB3 445 aa17.36■□□□□ 0.37
SF3B2-203ENST00000524627 LGR6Q9HBX8 967 aa17.36■□□□□ 0.37
SF3B2-203ENST00000524627 RNF181Q9P0P0 153 aa17.36■□□□□ 0.37
SF3B2-203ENST00000524627 TM4SF1P30408 202 aa17.35■□□□□ 0.37
SF3B2-203ENST00000524627 SLC39A6Q13433 755 aa17.35■□□□□ 0.37
SF3B2-203ENST00000524627 USPL1Q5W0Q7 1092 aa17.35■□□□□ 0.37
SF3B2-203ENST00000524627 C16orf71Q8IYS4 520 aaPredicted RBP17.35■□□□□ 0.37
SF3B2-203ENST00000524627 SOS1Q07889 1333 aaPredicted RBP17.35■□□□□ 0.37
SF3B2-203ENST00000524627 KCPQ6ZWJ8 1503 aa17.35■□□□□ 0.37
SF3B2-203ENST00000524627 HMOX1P09601 288 aa17.34■□□□□ 0.37
SF3B2-203ENST00000524627 DNAJC5GQ8N7S2 189 aa17.34■□□□□ 0.37
SF3B2-203ENST00000524627 RBM46Q8TBY0 533 aaKnown RBP17.34■□□□□ 0.37
SF3B2-203ENST00000524627 KDM2BQ8NHM5 1336 aa17.33■□□□□ 0.36
SF3B2-203ENST00000524627 RNMTO43148 476 aaKnown RBP17.33■□□□□ 0.36
SF3B2-203ENST00000524627 CYP19A1P11511 503 aaPredicted RBP17.33■□□□□ 0.36
SF3B2-203ENST00000524627 AMER1Q5JTC6 1135 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms