RNA–Protein interactions for RNA: ENST00000524436.5

RPS6KA1-209, Transcript of ribosomal protein S6 kinase A1, human

TSL 4

Gene RPS6KA1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS6KA1-209	ENST00000524436	RBM42	Q9BTD8	480 aa	Known RBP	11.3	□□□□□ -0.6
RPS6KA1-209	ENST00000524436	TUBGCP6	Q96RT7	1819 aa		11.3	□□□□□ -0.6
RPS6KA1-209	ENST00000524436	C4B	P0C0L5	1744 aa		11.29	□□□□□ -0.6
RPS6KA1-209	ENST00000524436	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.29	□□□□□ -0.6
RPS6KA1-209	ENST00000524436	PHF14	O94880	888 aa		11.29	□□□□□ -0.6
RPS6KA1-209	ENST00000524436	GPR162	Q16538	588 aa		11.29	□□□□□ -0.6
RPS6KA1-209	ENST00000524436	AKAP4	Q5JQC9	854 aa		11.29	□□□□□ -0.6
RPS6KA1-209	ENST00000524436	CFAP53	Q96M91	514 aa		11.29	□□□□□ -0.6
RPS6KA1-209	ENST00000524436	COL24A1	Q17RW2	1714 aa		11.29	□□□□□ -0.6
RPS6KA1-209	ENST00000524436	GNPAT	O15228	680 aa		11.28	□□□□□ -0.6
RPS6KA1-209	ENST00000524436	HMOX1	P09601	288 aa		11.28	□□□□□ -0.6
RPS6KA1-209	ENST00000524436	CNGB1	Q14028	1251 aa	Predicted RBP	11.28	□□□□□ -0.6
RPS6KA1-209	ENST00000524436	MSL1	Q68DK7	614 aa		11.28	□□□□□ -0.6
RPS6KA1-209	ENST00000524436	RTCB	Q9Y3I0	505 aa	Known RBP	11.28	□□□□□ -0.6
RPS6KA1-209	ENST00000524436	ITPK1	Q13572	414 aa		11.27	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	TRAPPC3L	Q5T215	181 aa		11.27	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	RC3H1	Q5TC82	1133 aa	Known RBP	11.27	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	PELP1	Q8IZL8	1130 aa	Known RBP	11.27	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	NFATC2IP	Q8NCF5	419 aa		11.27	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	LINC00116	Q8NCU8	138 aa		11.27	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	NUDC	Q9Y266	331 aa		11.27	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	CD2AP	Q9Y5K6	639 aa		11.27	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	U2SURP	O15042	1029 aa	Known RBP	11.26	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	GRIN3B	O60391	1043 aa		11.26	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	ADRA2B	P18089	450 aa		11.26	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	KDM6A	O15550	1401 aa	Predicted RBP	11.26	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	ZNF831	Q5JPB2	1677 aa		11.25	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	PTCD1	O75127	700 aa	Known RBP	11.25	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	NLGN1	Q8N2Q7	840 aa		11.25	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	SLC52A2	Q9HAB3	445 aa		11.25	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	CNTNAP4	Q9C0A0	1308 aa		11.25	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	UBR3	Q6ZT12	1888 aa		11.25	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	RNMT	O43148	476 aa	Known RBP	11.24	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	RPS6KA4	O75676	772 aa		11.24	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	RFC4	P35249	363 aa		11.24	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	GAS2L2	Q8NHY3	880 aa		11.24	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	MTHFSD	Q2M296	383 aa	Known RBP	11.23	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	SCN11A	Q9UI33	1791 aa		11.23	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	CHD4	Q14839	1912 aa		11.23	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	NLGN2	Q8NFZ4	835 aa		11.22	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	ARHGEF1	Q92888	912 aa	Known RBP	11.22	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	SLC4A9	Q96Q91	983 aa		11.22	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	GNAT3	A8MTJ3	354 aa		11.21	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	NEFM	P07197	916 aa		11.21	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	CRKL	P46109	303 aa	Known RBP	11.21	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	TEF	Q10587	303 aa		11.21	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	AMIGO3	Q86WK7	504 aa		11.21	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	TTC5	Q8N0Z6	440 aa		11.21	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	LGR6	Q9HBX8	967 aa		11.21	□□□□□ -0.61
RPS6KA1-209	ENST00000524436	MMP10	P09238	476 aa		11.2	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	SMIM5	Q71RC9	77 aa		11.2	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	PARP3	Q9Y6F1	533 aa		11.2	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	COL5A3	P25940	1745 aa	Predicted RBP	11.19	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.19	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	PPP2R1A	P30153	589 aa		11.19	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	VSIG10	Q8N0Z9	540 aa		11.19	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	CCDC87	Q9NVE4	849 aa		11.19	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	COL3A1	P02461	1466 aa	Predicted RBP	11.19	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	ZPR1	O75312	459 aa		11.18	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	FCHSD2	O94868	740 aa		11.18	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	STARD3NL	O95772	234 aa		11.18	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	PRKAR2B	P31323	418 aa		11.18	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	TGFB2	P61812	414 aa		11.18	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.18	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	RTF1	Q92541	710 aa	Known RBP	11.18	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.18	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	MRC1	P22897	1456 aa		11.18	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	GYS1	P13807	737 aa		11.17	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	SLC39A6	Q13433	755 aa		11.17	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	NPM2	Q86SE8	214 aa	Known RBP	11.17	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	DNAJC10	Q8IXB1	793 aa		11.17	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	CIC	Q96RK0	1608 aa	Predicted RBP	11.17	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	VIRMA	Q69YN4	1812 aa	Known RBP	11.16	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	CYP19A1	P11511	503 aa	Predicted RBP	11.16	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	YBX3	P16989	372 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	INTS5	Q6P9B9	1019 aa	Known RBP	11.16	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	RSPH6A	Q9H0K4	717 aa		11.16	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	PNN	Q9H307	717 aa	Known RBP	11.16	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	USP42	Q9H9J4	1324 aa	Known RBP	11.15	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	ADAMTS7	Q9UKP4	1686 aa		11.15	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	ZNF790	Q6PG37	636 aa		11.15	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	IL17RE	Q8NFR9	667 aa		11.15	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	MYH14	Q7Z406	1995 aa	Known RBP	11.15	□□□□□ -0.62
RPS6KA1-209	ENST00000524436	TJP1	Q07157	1748 aa		11.15	□□□□□ -0.63
RPS6KA1-209	ENST00000524436		A0A087WZG4	1122 aa		11.14	□□□□□ -0.63
RPS6KA1-209	ENST00000524436	BTBD11	A6QL63	1104 aa		11.14	□□□□□ -0.63
RPS6KA1-209	ENST00000524436	HTATSF1	O43719	755 aa	Known RBP	11.14	□□□□□ -0.63
RPS6KA1-209	ENST00000524436	PHACTR3	Q96KR7	559 aa		11.14	□□□□□ -0.63
RPS6KA1-209	ENST00000524436	FMNL2	Q96PY5	1086 aa		11.14	□□□□□ -0.63
RPS6KA1-209	ENST00000524436	SOS1	Q07889	1333 aa	Predicted RBP	11.13	□□□□□ -0.63
RPS6KA1-209	ENST00000524436	SRP68	Q9UHB9	627 aa	Known RBP	11.13	□□□□□ -0.63
RPS6KA1-209	ENST00000524436	NARF	Q9UHQ1	456 aa		11.13	□□□□□ -0.63
RPS6KA1-209	ENST00000524436	KCP	Q6ZWJ8	1503 aa		11.13	□□□□□ -0.63
RPS6KA1-209	ENST00000524436	HEG1	Q9ULI3	1381 aa		11.13	□□□□□ -0.63
RPS6KA1-209	ENST00000524436	C4A	P0C0L4	1744 aa		11.12	□□□□□ -0.63
RPS6KA1-209	ENST00000524436	CANX	P27824	592 aa	Known RBP	11.12	□□□□□ -0.63
RPS6KA1-209	ENST00000524436	FKBP8	Q14318	412 aa		11.12	□□□□□ -0.63
RPS6KA1-209	ENST00000524436	RALBP1	Q15311	655 aa		11.12	□□□□□ -0.63
RPS6KA1-209	ENST00000524436	USPL1	Q5W0Q7	1092 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms