RNA–Protein interactions for RNA: ENST00000524393.5

RBBP4-215, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 3

Gene RBBP4, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-215ENST00000524393 SYT17Q9BSW7 474 aa16.96■□□□□ 0.31
RBBP4-215ENST00000524393 ATG3Q9NT62 314 aa16.96■□□□□ 0.31
RBBP4-215ENST00000524393 COL24A1Q17RW2 1714 aa16.96■□□□□ 0.3
RBBP4-215ENST00000524393 U2SURPO15042 1029 aaKnown RBP16.95■□□□□ 0.3
RBBP4-215ENST00000524393 AKAP4Q5JQC9 854 aa16.95■□□□□ 0.3
RBBP4-215ENST00000524393 KLHL34Q8N239 644 aa16.95■□□□□ 0.3
RBBP4-215ENST00000524393 RBM42Q9BTD8 480 aaKnown RBP16.95■□□□□ 0.3
RBBP4-215ENST00000524393 MAP3K5Q99683 1374 aa16.93■□□□□ 0.3
RBBP4-215ENST00000524393 SCN11AQ9UI33 1791 aa16.93■□□□□ 0.3
RBBP4-215ENST00000524393 PHF14O94880 888 aa16.93■□□□□ 0.3
RBBP4-215ENST00000524393 ZNF831Q5JPB2 1677 aa16.93■□□□□ 0.3
RBBP4-215ENST00000524393 COL3A1P02461 1466 aaPredicted RBP16.93■□□□□ 0.3
RBBP4-215ENST00000524393 SSFA2P28290 1259 aa16.92■□□□□ 0.3
RBBP4-215ENST00000524393 NFATC2IPQ8NCF5 419 aa16.92■□□□□ 0.3
RBBP4-215ENST00000524393 LINC00116Q8NCU8 138 aa16.92■□□□□ 0.3
RBBP4-215ENST00000524393 UBR3Q6ZT12 1888 aa16.92■□□□□ 0.3
RBBP4-215ENST00000524393 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.91■□□□□ 0.3
RBBP4-215ENST00000524393 GNPATO15228 680 aa16.91■□□□□ 0.3
RBBP4-215ENST00000524393 ITPK1Q13572 414 aa16.91■□□□□ 0.3
RBBP4-215ENST00000524393 MSL1Q68DK7 614 aa16.91■□□□□ 0.3
RBBP4-215ENST00000524393 NUDCQ9Y266 331 aa16.91■□□□□ 0.3
RBBP4-215ENST00000524393 MTHFSDQ2M296 383 aaKnown RBP16.89■□□□□ 0.29
RBBP4-215ENST00000524393 PTCD1O75127 700 aaKnown RBP16.88■□□□□ 0.29
RBBP4-215ENST00000524393 PPP2R1AP30153 589 aa16.88■□□□□ 0.29
RBBP4-215ENST00000524393 SLC52A2Q9HAB3 445 aa16.88■□□□□ 0.29
RBBP4-215ENST00000524393 RTCBQ9Y3I0 505 aaKnown RBP16.88■□□□□ 0.29
RBBP4-215ENST00000524393 COL5A3P25940 1745 aaPredicted RBP16.87■□□□□ 0.29
RBBP4-215ENST00000524393 RNMTO43148 476 aaKnown RBP16.87■□□□□ 0.29
RBBP4-215ENST00000524393 YY1P25490 414 aa16.87■□□□□ 0.29
RBBP4-215ENST00000524393 GAS2L2Q8NHY3 880 aa16.87■□□□□ 0.29
RBBP4-215ENST00000524393 VIRMAQ69YN4 1812 aaKnown RBP16.86■□□□□ 0.29
RBBP4-215ENST00000524393 MRC1P22897 1456 aa16.86■□□□□ 0.29
RBBP4-215ENST00000524393 RC3H1Q5TC82 1133 aaKnown RBP16.86■□□□□ 0.29
RBBP4-215ENST00000524393 LGR6Q9HBX8 967 aa16.86■□□□□ 0.29
RBBP4-215ENST00000524393 CNTNAP4Q9C0A0 1308 aa16.86■□□□□ 0.29
RBBP4-215ENST00000524393 ADRA2BP18089 450 aa16.85■□□□□ 0.29
RBBP4-215ENST00000524393 TRAPPC3LQ5T215 181 aa16.85■□□□□ 0.29
RBBP4-215ENST00000524393 AMIGO3Q86WK7 504 aa16.85■□□□□ 0.29
RBBP4-215ENST00000524393 SLC4A9Q96Q91 983 aa16.85■□□□□ 0.29
RBBP4-215ENST00000524393 ADAMTS7Q9UKP4 1686 aa16.85■□□□□ 0.29
RBBP4-215ENST00000524393 GNAT3A8MTJ3 354 aa16.84■□□□□ 0.29
RBBP4-215ENST00000524393 U2AF1L5P0DN76 240 aaPredicted RBP16.84■□□□□ 0.29
RBBP4-215ENST00000524393 U2AF1Q01081 240 aaKnown RBP eCLIP16.84■□□□□ 0.29
RBBP4-215ENST00000524393 GPR162Q16538 588 aa16.84■□□□□ 0.29
RBBP4-215ENST00000524393 SMIM5Q71RC9 77 aa16.84■□□□□ 0.29
RBBP4-215ENST00000524393 CICQ96RK0 1608 aaPredicted RBP16.84■□□□□ 0.29
RBBP4-215ENST00000524393 PRKAR2BP31323 418 aa16.83■□□□□ 0.28
RBBP4-215ENST00000524393 TEFQ10587 303 aa16.83■□□□□ 0.28
RBBP4-215ENST00000524393 PELP1Q8IZL8 1130 aaKnown RBP16.83■□□□□ 0.28
RBBP4-215ENST00000524393 TJP1Q07157 1748 aa16.82■□□□□ 0.28
RBBP4-215ENST00000524393 RPS6KA4O75676 772 aa16.82■□□□□ 0.28
RBBP4-215ENST00000524393 RFC4P35249 363 aa16.82■□□□□ 0.28
RBBP4-215ENST00000524393 TTC5Q8N0Z6 440 aa16.82■□□□□ 0.28
RBBP4-215ENST00000524393 CD2APQ9Y5K6 639 aa16.82■□□□□ 0.28
RBBP4-215ENST00000524393 CRKLP46109 303 aaKnown RBP16.81■□□□□ 0.28
RBBP4-215ENST00000524393 NLGN2Q8NFZ4 835 aa16.81■□□□□ 0.28
RBBP4-215ENST00000524393 RSPH6AQ9H0K4 717 aa16.81■□□□□ 0.28
RBBP4-215ENST00000524393 NEFMP07197 916 aa16.8■□□□□ 0.28
RBBP4-215ENST00000524393 SLC39A6Q13433 755 aa16.8■□□□□ 0.28
RBBP4-215ENST00000524393 NLGN1Q8N2Q7 840 aa16.8■□□□□ 0.28
RBBP4-215ENST00000524393 ARHGEF1Q92888 912 aaKnown RBP16.8■□□□□ 0.28
RBBP4-215ENST00000524393 FCHSD2O94868 740 aa16.79■□□□□ 0.28
RBBP4-215ENST00000524393 RTF1Q92541 710 aaKnown RBP16.78■□□□□ 0.28
RBBP4-215ENST00000524393 KCPQ6ZWJ8 1503 aa16.78■□□□□ 0.28
RBBP4-215ENST00000524393 C4AP0C0L4 1744 aa16.78■□□□□ 0.28
RBBP4-215ENST00000524393 MMP10P09238 476 aa16.77■□□□□ 0.28
RBBP4-215ENST00000524393 DNAJC10Q8IXB1 793 aa16.77■□□□□ 0.28
RBBP4-215ENST00000524393 VSIG10Q8N0Z9 540 aa16.77■□□□□ 0.28
RBBP4-215ENST00000524393 PHACTR3Q96KR7 559 aa16.77■□□□□ 0.28
RBBP4-215ENST00000524393 CCDC87Q9NVE4 849 aa16.77■□□□□ 0.28
RBBP4-215ENST00000524393 MYH14Q7Z406 1995 aaKnown RBP16.77■□□□□ 0.27
RBBP4-215ENST00000524393 UBR2Q8IWV8 1755 aa16.77■□□□□ 0.27
RBBP4-215ENST00000524393 GRIN3BO60391 1043 aa16.76■□□□□ 0.27
RBBP4-215ENST00000524393 IL17REQ8NFR9 667 aa16.76■□□□□ 0.27
RBBP4-215ENST00000524393 CHD4Q14839 1912 aa16.76■□□□□ 0.27
RBBP4-215ENST00000524393 SIPA1L3O60292 1781 aaPredicted RBP16.75■□□□□ 0.27
RBBP4-215ENST00000524393 GYS1P13807 737 aa16.75■□□□□ 0.27
RBBP4-215ENST00000524393 RALBP1Q15311 655 aa16.75■□□□□ 0.27
RBBP4-215ENST00000524393 STARD3NLO95772 234 aa16.74■□□□□ 0.27
RBBP4-215ENST00000524393 CYP19A1P11511 503 aaPredicted RBP16.74■□□□□ 0.27
RBBP4-215ENST00000524393 DDX10Q13206 875 aaKnown RBP16.74■□□□□ 0.27
RBBP4-215ENST00000524393 INTS5Q6P9B9 1019 aaKnown RBP16.74■□□□□ 0.27
RBBP4-215ENST00000524393 ZNF790Q6PG37 636 aa16.74■□□□□ 0.27
RBBP4-215ENST00000524393 PNNQ9H307 717 aaKnown RBP16.74■□□□□ 0.27
RBBP4-215ENST00000524393 PARP3Q9Y6F1 533 aa16.74■□□□□ 0.27
RBBP4-215ENST00000524393 CEMIPQ8WUJ3 1361 aa16.74■□□□□ 0.27
RBBP4-215ENST00000524393 USP42Q9H9J4 1324 aaKnown RBP16.73■□□□□ 0.27
RBBP4-215ENST00000524393 ZPR1O75312 459 aa16.73■□□□□ 0.27
RBBP4-215ENST00000524393 TEX13AQ9BXU3 409 aaPredicted RBP16.73■□□□□ 0.27
RBBP4-215ENST00000524393 BTBD11A6QL63 1104 aa16.72■□□□□ 0.27
RBBP4-215ENST00000524393 FMNL2Q96PY5 1086 aa16.72■□□□□ 0.27
RBBP4-215ENST00000524393 HEG1Q9ULI3 1381 aa16.72■□□□□ 0.27
RBBP4-215ENST00000524393 SOS1Q07889 1333 aaPredicted RBP16.71■□□□□ 0.27
RBBP4-215ENST00000524393 HTATSF1O43719 755 aaKnown RBP16.71■□□□□ 0.27
RBBP4-215ENST00000524393 ZNF496Q96IT1 587 aaPredicted RBP16.71■□□□□ 0.27
RBBP4-215ENST00000524393 SRP68Q9UHB9 627 aaKnown RBP16.71■□□□□ 0.27
RBBP4-215ENST00000524393 COL15A1P39059 1388 aa16.71■□□□□ 0.27
RBBP4-215ENST00000524393 MAPK8IP3Q9UPT6 1336 aa16.7■□□□□ 0.26
RBBP4-215ENST00000524393 YBX3P16989 372 aaKnown RBP eCLIP16.7■□□□□ 0.265e-18■□□□□ 10.5
RBBP4-215ENST00000524393 MCM10Q7L590 875 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms