RNA–Protein interactions for RNA: ENST00000524208.5

POLB-215, Transcript of DNA polymerase beta, humanhuman

TSL 5

Gene POLB, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-215ENST00000524208 ZDHHC16Q969W1 377 aa10.99□□□□□ -0.65
POLB-215ENST00000524208 TESK2Q96S53 571 aa10.99□□□□□ -0.65
POLB-215ENST00000524208 CARD11Q9BXL7 1154 aa10.99□□□□□ -0.65
POLB-215ENST00000524208 NFAT5O94916 1531 aa10.99□□□□□ -0.65
POLB-215ENST00000524208 USP54Q70EL1 1684 aa10.98□□□□□ -0.65
POLB-215ENST00000524208 CABP1Q9NZU7 370 aa10.98□□□□□ -0.65
POLB-215ENST00000524208 BRWD3Q6RI45 1802 aa10.98□□□□□ -0.65
POLB-215ENST00000524208 GNPATO15228 680 aa10.97□□□□□ -0.65
POLB-215ENST00000524208 PTGDRQ13258 359 aa10.97□□□□□ -0.65
POLB-215ENST00000524208 PCGF6Q9BYE7 350 aa10.97□□□□□ -0.65
POLB-215ENST00000524208 LHX6Q9UPM6 363 aa10.97□□□□□ -0.65
POLB-215ENST00000524208 EVC2Q86UK5 1308 aa10.97□□□□□ -0.65
POLB-215ENST00000524208 ATAD2Q6PL18 1390 aa10.97□□□□□ -0.65
POLB-215ENST00000524208 CAMTA1Q9Y6Y1 1673 aa10.97□□□□□ -0.65
POLB-215ENST00000524208 CPDO75976 1380 aa10.96□□□□□ -0.65
POLB-215ENST00000524208 USP47Q96K76 1375 aa10.96□□□□□ -0.65
POLB-215ENST00000524208 VPS72Q15906 364 aa10.96□□□□□ -0.65
POLB-215ENST00000524208 GJD4Q96KN9 370 aaPredicted RBP10.96□□□□□ -0.65
POLB-215ENST00000524208 COL18A1P39060 1754 aa10.95□□□□□ -0.66
POLB-215ENST00000524208 PPP4R3BQ5MIZ7 849 aa10.95□□□□□ -0.66
POLB-215ENST00000524208 AK7Q96M32 723 aa10.95□□□□□ -0.66
POLB-215ENST00000524208 MYOM1P52179 1685 aa10.95□□□□□ -0.66
POLB-215ENST00000524208 A0A1W2PP64 1363 aa10.94□□□□□ -0.66
POLB-215ENST00000524208 BRD4O60885 1362 aaPredicted RBP10.94□□□□□ -0.66
POLB-215ENST00000524208 CHRNA2Q15822 529 aa10.94□□□□□ -0.66
POLB-215ENST00000524208 TSR1Q2NL82 804 aaKnown RBP10.94□□□□□ -0.66
POLB-215ENST00000524208 CDHR5Q9HBB8 845 aa10.94□□□□□ -0.66
POLB-215ENST00000524208 BTG4Q9NY30 223 aa10.94□□□□□ -0.66
POLB-215ENST00000524208 COL5A2P05997 1499 aaPredicted RBP10.93□□□□□ -0.66
POLB-215ENST00000524208 TTC21BQ7Z4L5 1316 aa10.93□□□□□ -0.66
POLB-215ENST00000524208 CLSPNQ9HAW4 1339 aa10.93□□□□□ -0.66
POLB-215ENST00000524208 PBX2P40425 430 aa10.93□□□□□ -0.66
POLB-215ENST00000524208 MAP2K5Q13163 448 aa10.93□□□□□ -0.66
POLB-215ENST00000524208 PRDM11Q9NQV5 511 aa10.93□□□□□ -0.66
POLB-215ENST00000524208 OVOS2A0A0J9YW53 1432 aa10.92□□□□□ -0.66
POLB-215ENST00000524208 OVOS2Q6IE36 1432 aa10.92□□□□□ -0.66
POLB-215ENST00000524208 SPATA31A5Q5VU36 1347 aa10.92□□□□□ -0.66
POLB-215ENST00000524208 SPATA31A7Q8IWB4 1347 aa10.92□□□□□ -0.66
POLB-215ENST00000524208 ST20-MTHFSA0A0A6YYL1 179 aa10.92□□□□□ -0.66
POLB-215ENST00000524208 C6orf132Q5T0Z8 1188 aa10.92□□□□□ -0.66
POLB-215ENST00000524208 ABTB2Q8N961 1025 aa10.92□□□□□ -0.66
POLB-215ENST00000524208 ZC3H6P61129 1189 aaKnown RBP10.91□□□□□ -0.66
POLB-215ENST00000524208 ADAM33Q9BZ11 813 aa10.91□□□□□ -0.66
POLB-215ENST00000524208 NPDC1Q9NQX5 325 aaPredicted RBP10.91□□□□□ -0.66
POLB-215ENST00000524208 KTN1Q86UP2 1357 aaKnown RBP10.9□□□□□ -0.66
POLB-215ENST00000524208 ONECUT3O60422 494 aaPredicted RBP10.9□□□□□ -0.66
POLB-215ENST00000524208 SEPT12Q8IYM1 358 aa10.9□□□□□ -0.66
POLB-215ENST00000524208 AXIN2Q9Y2T1 843 aa10.9□□□□□ -0.66
POLB-215ENST00000524208 WNK3Q9BYP7 1800 aa10.9□□□□□ -0.66
POLB-215ENST00000524208 EDC4Q6P2E9 1401 aaKnown RBP10.9□□□□□ -0.66
POLB-215ENST00000524208 USP31Q70CQ4 1352 aa10.9□□□□□ -0.67
POLB-215ENST00000524208 SPATA31A1Q5TZJ5 1347 aa10.89□□□□□ -0.67
POLB-215ENST00000524208 LRRC37A3O60309 1634 aa10.89□□□□□ -0.67
POLB-215ENST00000524208 GCP02774 474 aa10.89□□□□□ -0.67
POLB-215ENST00000524208 FAM98CQ17RN3 349 aaKnown RBP10.89□□□□□ -0.67
POLB-215ENST00000524208 SLC12A5Q9H2X9 1139 aa10.89□□□□□ -0.67
POLB-215ENST00000524208 TNS1Q9HBL0 1735 aaKnown RBP10.89□□□□□ -0.67
POLB-215ENST00000524208 AATKQ6ZMQ8 1374 aa10.89□□□□□ -0.67
POLB-215ENST00000524208 ABCC6O95255 1503 aa10.89□□□□□ -0.67
POLB-215ENST00000524208 IRF6O14896 467 aa10.88□□□□□ -0.67
POLB-215ENST00000524208 NME9Q86XW9 330 aa10.88□□□□□ -0.67
POLB-215ENST00000524208 BCL2L12Q9HB09 334 aa10.88□□□□□ -0.67
POLB-215ENST00000524208 TTC21AQ8NDW8 1320 aa10.87□□□□□ -0.67
POLB-215ENST00000524208 PARP4Q9UKK3 1724 aaKnown RBP10.87□□□□□ -0.67
POLB-215ENST00000524208 FECHP22830 423 aa10.87□□□□□ -0.67
POLB-215ENST00000524208 LARP1Q6PKG0 1096 aaKnown RBP10.87□□□□□ -0.67
POLB-215ENST00000524208 CCDC102AQ96A19 550 aa10.87□□□□□ -0.67
POLB-215ENST00000524208 RGPD5Q99666 1765 aa10.86□□□□□ -0.67
POLB-215ENST00000524208 BRPF1P55201 1214 aaPredicted RBP10.86□□□□□ -0.67
POLB-215ENST00000524208 NLRP13Q86W25 1043 aa10.86□□□□□ -0.67
POLB-215ENST00000524208 STRN4Q9NRL3 753 aa10.86□□□□□ -0.67
POLB-215ENST00000524208 CCDC9Q9Y3X0 531 aaKnown RBP10.86□□□□□ -0.67
POLB-215ENST00000524208 ANKRD36BQ8N2N9 1353 aa10.86□□□□□ -0.67
POLB-215ENST00000524208 NINLQ9Y2I6 1382 aa10.86□□□□□ -0.67
POLB-215ENST00000524208 PEAK1Q9H792 1746 aa10.86□□□□□ -0.67
POLB-215ENST00000524208 LTN1O94822 1766 aa10.85□□□□□ -0.67
POLB-215ENST00000524208 DISP2A7MBM2 1401 aa10.85□□□□□ -0.67
POLB-215ENST00000524208 TRIM66O15016 1216 aa10.85□□□□□ -0.67
POLB-215ENST00000524208 PTPREP23469 700 aa10.85□□□□□ -0.67
POLB-215ENST00000524208 NEUROD2Q15784 382 aa10.85□□□□□ -0.67
POLB-215ENST00000524208 ARHGEF25Q86VW2 580 aa10.85□□□□□ -0.67
POLB-215ENST00000524208 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.85□□□□□ -0.67
POLB-215ENST00000524208 PUS7Q96PZ0 661 aaKnown RBP10.85□□□□□ -0.67
POLB-215ENST00000524208 PLA2G2EQ9NZK7 142 aa10.85□□□□□ -0.67
POLB-215ENST00000524208 RBM27Q9P2N5 1060 aaKnown RBP10.85□□□□□ -0.67
POLB-215ENST00000524208 BLMP54132 1417 aaPredicted RBP10.84□□□□□ -0.67
POLB-215ENST00000524208 CRB1P82279 1406 aa10.84□□□□□ -0.67
POLB-215ENST00000524208 FAM182BQ5T319 152 aa10.84□□□□□ -0.67
POLB-215ENST00000524208 POTEEQ6S8J3 1075 aa10.84□□□□□ -0.67
POLB-215ENST00000524208 TMC1Q8TDI8 760 aa10.84□□□□□ -0.67
POLB-215ENST00000524208 TIMELESSQ9UNS1 1208 aa10.84□□□□□ -0.67
POLB-215ENST00000524208 KRT27Q7Z3Y8 459 aa10.83□□□□□ -0.68
POLB-215ENST00000524208 CCER1Q8TC90 406 aaPredicted RBP10.83□□□□□ -0.68
POLB-215ENST00000524208 HCSTQ9UBK5 93 aa10.83□□□□□ -0.68
POLB-215ENST00000524208 ZBTB7CA1YPR0 619 aa10.82□□□□□ -0.68
POLB-215ENST00000524208 PPP1R3GB7ZBB8 358 aa10.82□□□□□ -0.68
POLB-215ENST00000524208 KIF20BQ96Q89 1820 aa10.81□□□□□ -0.68
POLB-215ENST00000524208 RGPD1P0DJD0 1748 aa10.81□□□□□ -0.68
POLB-215ENST00000524208 USP35Q9P2H5 1018 aa10.81□□□□□ -0.68
POLB-215ENST00000524208 FAM208AQ9UK61 1670 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms