RNA–Protein interactions for RNA: ENST00000524032.5

LAMA4-221, Transcript of laminin subunit alpha 4, humanhuman

TSL 4

Gene LAMA4, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-221ENST00000524032 SLC27A3Q5K4L6 730 aa11.59□□□□□ -0.55
LAMA4-221ENST00000524032 OGFOD1Q8N543 542 aa11.59□□□□□ -0.55
LAMA4-221ENST00000524032 LYSMD3Q7Z3D4 306 aa11.58□□□□□ -0.56
LAMA4-221ENST00000524032 LARGE2Q8N3Y3 721 aa11.58□□□□□ -0.56
LAMA4-221ENST00000524032 VRTNQ9H8Y1 702 aa11.58□□□□□ -0.56
LAMA4-221ENST00000524032 HRH3Q9Y5N1 445 aa11.58□□□□□ -0.56
LAMA4-221ENST00000524032 TMEM229AB2RXF0 380 aa11.57□□□□□ -0.56
LAMA4-221ENST00000524032 RASA1P20936 1047 aa11.57□□□□□ -0.56
LAMA4-221ENST00000524032 KANK4Q5T7N3 995 aaPredicted RBP11.57□□□□□ -0.56
LAMA4-221ENST00000524032 CCDC82Q8N4S0 544 aa11.57□□□□□ -0.56
LAMA4-221ENST00000524032 TPCN2Q8NHX9 752 aa11.57□□□□□ -0.56
LAMA4-221ENST00000524032 C1orf115Q9H7X2 142 aa11.57□□□□□ -0.56
LAMA4-221ENST00000524032 KIAA1024Q9UPX6 916 aa11.57□□□□□ -0.56
LAMA4-221ENST00000524032 RFX1P22670 979 aa11.56□□□□□ -0.56
LAMA4-221ENST00000524032 CENPCQ03188 943 aa11.56□□□□□ -0.56
LAMA4-221ENST00000524032 TLR1Q15399 786 aa11.56□□□□□ -0.56
LAMA4-221ENST00000524032 LARP1Q6PKG0 1096 aaKnown RBP11.56□□□□□ -0.56
LAMA4-221ENST00000524032 RBM19Q9Y4C8 960 aaKnown RBP11.56□□□□□ -0.56
LAMA4-221ENST00000524032 NCAPD3P42695 1498 aa11.56□□□□□ -0.56
LAMA4-221ENST00000524032 GTF2E1P29083 439 aaPredicted RBP11.55□□□□□ -0.56
LAMA4-221ENST00000524032 CCDC102BQ68D86 513 aa11.55□□□□□ -0.56
LAMA4-221ENST00000524032 SIX5Q8N196 739 aa11.55□□□□□ -0.56
LAMA4-221ENST00000524032 ZNF594Q96JF6 807 aaPredicted RBP11.55□□□□□ -0.56
LAMA4-221ENST00000524032 ZSCAN10Q96SZ4 725 aaPredicted RBP11.55□□□□□ -0.56
LAMA4-221ENST00000524032 GRIP2Q9C0E4 1043 aa11.55□□□□□ -0.56
LAMA4-221ENST00000524032 SMARCA2P51531 1590 aa11.54□□□□□ -0.56
LAMA4-221ENST00000524032 FAM196BA6NMK8 535 aa11.54□□□□□ -0.56
LAMA4-221ENST00000524032 BACH1O14867 736 aa11.54□□□□□ -0.56
LAMA4-221ENST00000524032 PRICKLE2Q7Z3G6 844 aa11.54□□□□□ -0.56
LAMA4-221ENST00000524032 FHDC1Q9C0D6 1143 aaPredicted RBP11.54□□□□□ -0.56
LAMA4-221ENST00000524032 ZNF358Q9NW07 568 aa11.54□□□□□ -0.56
LAMA4-221ENST00000524032 USP17L15C9J2P7 530 aa11.53□□□□□ -0.56
LAMA4-221ENST00000524032 USP17L10C9JJH3 530 aa11.53□□□□□ -0.56
LAMA4-221ENST00000524032 USP17L13C9JLJ4 530 aa11.53□□□□□ -0.56
LAMA4-221ENST00000524032 USP17L12C9JPN9 530 aa11.53□□□□□ -0.56
LAMA4-221ENST00000524032 USP17L11C9JVI0 530 aa11.53□□□□□ -0.56
LAMA4-221ENST00000524032 USP17L21D6R901 530 aa11.53□□□□□ -0.56
LAMA4-221ENST00000524032 USP17L18D6R9N7 530 aa11.53□□□□□ -0.56
LAMA4-221ENST00000524032 USP17L22D6RA61 530 aa11.53□□□□□ -0.56
LAMA4-221ENST00000524032 USP17L17D6RBQ6 530 aa11.53□□□□□ -0.56
LAMA4-221ENST00000524032 USP17L19D6RCP7 530 aa11.53□□□□□ -0.56
LAMA4-221ENST00000524032 USP17L20D6RJB6 530 aa11.53□□□□□ -0.56
LAMA4-221ENST00000524032 ZBTB7BO15156 539 aaPredicted RBP11.53□□□□□ -0.56
LAMA4-221ENST00000524032 USP17L24Q0WX57 530 aa11.53□□□□□ -0.56
LAMA4-221ENST00000524032 SERTAD1Q9UHV2 236 aa11.53□□□□□ -0.56
LAMA4-221ENST00000524032 TOP2AP11388 1531 aaKnown RBP11.52□□□□□ -0.57
LAMA4-221ENST00000524032 SPATA31C2B4DYI2 1134 aa11.52□□□□□ -0.57
LAMA4-221ENST00000524032 SMTNP53814 917 aa11.52□□□□□ -0.57
LAMA4-221ENST00000524032 CRTC2Q53ET0 693 aaPredicted RBP11.52□□□□□ -0.57
LAMA4-221ENST00000524032 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.52□□□□□ -0.57
LAMA4-221ENST00000524032 SLC4A9Q96Q91 983 aa11.52□□□□□ -0.57
LAMA4-221ENST00000524032 PTSQ03393 145 aa11.51□□□□□ -0.57
LAMA4-221ENST00000524032 PTK7Q13308 1070 aa11.51□□□□□ -0.57
LAMA4-221ENST00000524032 GNASQ5JWF2 1037 aa11.51□□□□□ -0.57
LAMA4-221ENST00000524032 TMEM214Q6NUQ4 689 aaKnown RBP11.51□□□□□ -0.57
LAMA4-221ENST00000524032 TAS1R3Q7RTX0 852 aa11.5□□□□□ -0.57
LAMA4-221ENST00000524032 NBPF15Q8N660 670 aa11.5□□□□□ -0.57
LAMA4-221ENST00000524032 NXF1Q9UBU9 619 aaKnown RBP11.5□□□□□ -0.57
LAMA4-221ENST00000524032 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.49□□□□□ -0.57
LAMA4-221ENST00000524032 A6NJY4 79 aa11.49□□□□□ -0.57
LAMA4-221ENST00000524032 M0R2N6 131 aa11.49□□□□□ -0.57
LAMA4-221ENST00000524032 RHOQP17081 205 aa11.49□□□□□ -0.57
LAMA4-221ENST00000524032 MTFR1Q15390 333 aa11.49□□□□□ -0.57
LAMA4-221ENST00000524032 NBPF10Q6P3W6 841 aaKnown RBP11.49□□□□□ -0.57
LAMA4-221ENST00000524032 PPARGC1BQ86YN6 1023 aaKnown RBP11.49□□□□□ -0.57
LAMA4-221ENST00000524032 RHBDD1Q8TEB9 315 aa11.49□□□□□ -0.57
LAMA4-221ENST00000524032 PBXIP1Q96AQ6 731 aa11.49□□□□□ -0.57
LAMA4-221ENST00000524032 DKK1O94907 266 aa11.48□□□□□ -0.57
LAMA4-221ENST00000524032 SEC13P55735 322 aa11.48□□□□□ -0.57
LAMA4-221ENST00000524032 POU4F2Q12837 409 aa11.48□□□□□ -0.57
LAMA4-221ENST00000524032 CDCA8Q53HL2 280 aa11.48□□□□□ -0.57
LAMA4-221ENST00000524032 WDR44Q5JSH3 913 aa11.48□□□□□ -0.57
LAMA4-221ENST00000524032 NPAS3Q8IXF0 933 aa11.48□□□□□ -0.57
LAMA4-221ENST00000524032 CC2D2AQ9P2K1 1620 aa11.47□□□□□ -0.57
LAMA4-221ENST00000524032 BAZ1BQ9UIG0 1483 aaKnown RBP11.47□□□□□ -0.57
LAMA4-221ENST00000524032 DPYDQ12882 1025 aa11.47□□□□□ -0.57
LAMA4-221ENST00000524032 ANKMY2Q8IV38 441 aa11.47□□□□□ -0.57
LAMA4-221ENST00000524032 HMGXB3Q12766 1538 aa11.46□□□□□ -0.57
LAMA4-221ENST00000524032 SLC35F4A4IF30 521 aa11.46□□□□□ -0.57
LAMA4-221ENST00000524032 SFI1A8K8P3 1242 aa11.46□□□□□ -0.57
LAMA4-221ENST00000524032 CCDC155Q8N6L0 562 aa11.46□□□□□ -0.57
LAMA4-221ENST00000524032 ZNF775Q96BV0 537 aaPredicted RBP11.46□□□□□ -0.57
LAMA4-221ENST00000524032 SENP3-EIF4A1A0A087X0R7 540 aa11.45□□□□□ -0.58
LAMA4-221ENST00000524032 CDK2AP1O14519 115 aa11.45□□□□□ -0.58
LAMA4-221ENST00000524032 TERTO14746 1132 aaKnown RBP11.45□□□□□ -0.58
LAMA4-221ENST00000524032 EPHA4P54764 986 aa11.45□□□□□ -0.58
LAMA4-221ENST00000524032 SRPK2P78362 688 aaKnown RBP11.45□□□□□ -0.58
LAMA4-221ENST00000524032 SCHIP1Q9P0W5 487 aaPredicted RBP11.45□□□□□ -0.58
LAMA4-221ENST00000524032 PPFIA3O75145 1194 aa11.44□□□□□ -0.58
LAMA4-221ENST00000524032 C4orf17Q53FE4 359 aa11.44□□□□□ -0.58
LAMA4-221ENST00000524032 NIFKQ9BYG3 293 aaKnown RBP11.44□□□□□ -0.58
LAMA4-221ENST00000524032 TIMMDC1Q9NPL8 285 aa11.44□□□□□ -0.58
LAMA4-221ENST00000524032 IQSEC3Q9UPP2 1182 aaPredicted RBP11.44□□□□□ -0.58
LAMA4-221ENST00000524032 CCDC88BA6NC98 1476 aa11.44□□□□□ -0.58
LAMA4-221ENST00000524032 H3BM21 787 aa11.43□□□□□ -0.58
LAMA4-221ENST00000524032 TNS4Q8IZW8 715 aa11.43□□□□□ -0.58
LAMA4-221ENST00000524032 TSEN2Q8NCE0 465 aaKnown RBP11.43□□□□□ -0.58
LAMA4-221ENST00000524032 SLC16A10Q8TF71 515 aa11.43□□□□□ -0.58
LAMA4-221ENST00000524032 ARXQ96QS3 562 aa11.43□□□□□ -0.58
LAMA4-221ENST00000524032 NOVA2Q9UNW9 492 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms