RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 DNAJC5GQ8N7S2 189 aa13.09□□□□□ -0.31
PTPN12-216ENST00000523952 COL5A3P25940 1745 aaPredicted RBP13.08□□□□□ -0.32
PTPN12-216ENST00000523952 MMP10P09238 476 aa13.08□□□□□ -0.32
PTPN12-216ENST00000523952 SMIM5Q71RC9 77 aa13.08□□□□□ -0.32
PTPN12-216ENST00000523952 TNS4Q8IZW8 715 aa13.08□□□□□ -0.32
PTPN12-216ENST00000523952 RBM42Q9BTD8 480 aaKnown RBP13.08□□□□□ -0.32
PTPN12-216ENST00000523952 NMRK2Q9NPI5 230 aa13.08□□□□□ -0.32
PTPN12-216ENST00000523952 PXDNLA1KZ92 1463 aa13.08□□□□□ -0.32
PTPN12-216ENST00000523952 PLEKHG2Q9H7P9 1386 aa13.07□□□□□ -0.32
PTPN12-216ENST00000523952 FCHSD2O94868 740 aa13.07□□□□□ -0.32
PTPN12-216ENST00000523952 TGFB2P61812 414 aa13.07□□□□□ -0.32
PTPN12-216ENST00000523952 RBM46Q8TBY0 533 aaKnown RBP13.07□□□□□ -0.32
PTPN12-216ENST00000523952 KLRG1Q96E93 195 aa13.07□□□□□ -0.32
PTPN12-216ENST00000523952 PUS7Q96PZ0 661 aaKnown RBP13.07□□□□□ -0.32
PTPN12-216ENST00000523952 LOC102724428A0A0B4J2F2 783 aa13.06□□□□□ -0.32
PTPN12-216ENST00000523952 ATP6V1AP38606 617 aa13.06□□□□□ -0.32
PTPN12-216ENST00000523952 SIK1P57059 783 aa13.06□□□□□ -0.32
PTPN12-216ENST00000523952 COL13A1Q5TAT6 717 aaPredicted RBP13.06□□□□□ -0.32
PTPN12-216ENST00000523952 AMIGO3Q86WK7 504 aa13.06□□□□□ -0.32
PTPN12-216ENST00000523952 CCDC87Q9NVE4 849 aa13.06□□□□□ -0.32
PTPN12-216ENST00000523952 TMOD3Q9NYL9 352 aa13.06□□□□□ -0.32
PTPN12-216ENST00000523952 KDM2BQ8NHM5 1336 aa13.06□□□□□ -0.32
PTPN12-216ENST00000523952 ZNF831Q5JPB2 1677 aa13.05□□□□□ -0.32
PTPN12-216ENST00000523952 A0A0G2JLW4 131 aa13.05□□□□□ -0.32
PTPN12-216ENST00000523952 CYP27B1O15528 508 aa13.05□□□□□ -0.32
PTPN12-216ENST00000523952 CHRDL2Q6WN34 429 aa13.05□□□□□ -0.32
PTPN12-216ENST00000523952 LINC00116Q8NCU8 138 aa13.05□□□□□ -0.32
PTPN12-216ENST00000523952 PIGBQ92521 554 aa13.05□□□□□ -0.32
PTPN12-216ENST00000523952 SPG7Q9UQ90 795 aa13.05□□□□□ -0.32
PTPN12-216ENST00000523952 INSRP06213 1382 aa13.05□□□□□ -0.32
PTPN12-216ENST00000523952 FLT4P35916 1363 aa13.05□□□□□ -0.32
PTPN12-216ENST00000523952 SLC24A1O60721 1099 aa13.04□□□□□ -0.32
PTPN12-216ENST00000523952 HTRA3P83110 453 aa13.04□□□□□ -0.32
PTPN12-216ENST00000523952 FSTL1Q12841 308 aa13.04□□□□□ -0.32
PTPN12-216ENST00000523952 HSP90AB2PQ58FF8 381 aa13.04□□□□□ -0.32
PTPN12-216ENST00000523952 GGNBP2Q9H3C7 697 aa13.04□□□□□ -0.32
PTPN12-216ENST00000523952 ANKRD26Q9UPS8 1709 aa13.04□□□□□ -0.32
PTPN12-216ENST00000523952 KCPQ6ZWJ8 1503 aa13.03□□□□□ -0.32
PTPN12-216ENST00000523952 MYH14Q7Z406 1995 aaKnown RBP13.03□□□□□ -0.32
PTPN12-216ENST00000523952 TIAM2Q8IVF5 1701 aa13.03□□□□□ -0.32
PTPN12-216ENST00000523952 TMF1P82094 1093 aa13.03□□□□□ -0.32
PTPN12-216ENST00000523952 TRAPPC3LQ5T215 181 aa13.03□□□□□ -0.32
PTPN12-216ENST00000523952 C9orf131Q5VYM1 1079 aa13.03□□□□□ -0.32
PTPN12-216ENST00000523952 NLGN1Q8N2Q7 840 aa13.03□□□□□ -0.32
PTPN12-216ENST00000523952 RTCBQ9Y3I0 505 aaKnown RBP13.03□□□□□ -0.32
PTPN12-216ENST00000523952 PARP3Q9Y6F1 533 aa13.03□□□□□ -0.32
PTPN12-216ENST00000523952 VIRMAQ69YN4 1812 aaKnown RBP13.03□□□□□ -0.32
PTPN12-216ENST00000523952 C10orf71Q711Q0 1435 aa13.03□□□□□ -0.32
PTPN12-216ENST00000523952 PPM1GO15355 546 aaPredicted RBP13.01□□□□□ -0.33
PTPN12-216ENST00000523952 DPEP1P16444 411 aa13.01□□□□□ -0.33
PTPN12-216ENST00000523952 RFC4P35249 363 aa13.01□□□□□ -0.33
PTPN12-216ENST00000523952 PRELPP51888 382 aa13.01□□□□□ -0.33
PTPN12-216ENST00000523952 JMYQ8N9B5 988 aa13.01□□□□□ -0.33
PTPN12-216ENST00000523952 RNF181Q9P0P0 153 aa13.01□□□□□ -0.33
PTPN12-216ENST00000523952 KIF24Q5T7B8 1368 aa13.01□□□□□ -0.33
PTPN12-216ENST00000523952 AFDNP55196 1824 aaKnown RBP13□□□□□ -0.33
PTPN12-216ENST00000523952 TONSLQ96HA7 1378 aa13□□□□□ -0.33
PTPN12-216ENST00000523952 FYB1O15117 783 aa13□□□□□ -0.33
PTPN12-216ENST00000523952 ITPK1Q13572 414 aa13□□□□□ -0.33
PTPN12-216ENST00000523952 RRAGCQ9HB90 399 aa13□□□□□ -0.33
PTPN12-216ENST00000523952 PIM2Q9P1W9 311 aa13□□□□□ -0.33
PTPN12-216ENST00000523952 ASAP1Q9ULH1 1129 aa13□□□□□ -0.33
PTPN12-216ENST00000523952 DICER1Q9UPY3 1922 aaKnown RBP13□□□□□ -0.33
PTPN12-216ENST00000523952 CACNA1SQ13698 1873 aa12.99□□□□□ -0.33
PTPN12-216ENST00000523952 NKX1-1Q15270 411 aaPredicted RBP12.99□□□□□ -0.33
PTPN12-216ENST00000523952 SMC1BQ8NDV3 1235 aa12.99□□□□□ -0.33
PTPN12-216ENST00000523952 DLEC1Q9Y238 1755 aa12.99□□□□□ -0.33
PTPN12-216ENST00000523952 PCNTO95613 3336 aa12.98□□□□□ -0.33
PTPN12-216ENST00000523952 ST20-MTHFSA0A0A6YYL1 179 aa12.98□□□□□ -0.33
PTPN12-216ENST00000523952 DALRD3Q5D0E6 543 aaKnown RBP12.98□□□□□ -0.33
PTPN12-216ENST00000523952 IFNL2Q8IZJ0 200 aa12.98□□□□□ -0.33
PTPN12-216ENST00000523952 ARHGEF1Q92888 912 aaKnown RBP12.96□□□□□ -0.33
PTPN12-216ENST00000523952 GYS1P13807 737 aa12.95□□□□□ -0.34
PTPN12-216ENST00000523952 PHKG2P15735 406 aa12.95□□□□□ -0.34
PTPN12-216ENST00000523952 TESK2Q96S53 571 aa12.95□□□□□ -0.34
PTPN12-216ENST00000523952 ATG3Q9NT62 314 aa12.95□□□□□ -0.34
PTPN12-216ENST00000523952 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.95□□□□□ -0.343e-9■■■■■ 26.9
PTPN12-216ENST00000523952 EMILIN1Q9Y6C2 1016 aa12.95□□□□□ -0.34
PTPN12-216ENST00000523952 HSPA1AP0DMV8 641 aaKnown RBP12.94□□□□□ -0.34
PTPN12-216ENST00000523952 HSPA1BP0DMV9 641 aaKnown RBP12.94□□□□□ -0.34
PTPN12-216ENST00000523952 RC3H1Q5TC82 1133 aaKnown RBP12.94□□□□□ -0.34
PTPN12-216ENST00000523952 DCAF5Q96JK2 942 aa12.94□□□□□ -0.34
PTPN12-216ENST00000523952 SCN11AQ9UI33 1791 aa12.94□□□□□ -0.34
PTPN12-216ENST00000523952 TJP1Q07157 1748 aa12.93□□□□□ -0.34
PTPN12-216ENST00000523952 RPS6KA4O75676 772 aa12.93□□□□□ -0.34
PTPN12-216ENST00000523952 SAMD1Q6SPF0 538 aaPredicted RBP12.93□□□□□ -0.34
PTPN12-216ENST00000523952 NCAPD2Q15021 1401 aa12.93□□□□□ -0.34
PTPN12-216ENST00000523952 KDRP35968 1356 aa12.93□□□□□ -0.34
PTPN12-216ENST00000523952 CNTNAP4Q9C0A0 1308 aa12.92□□□□□ -0.34
PTPN12-216ENST00000523952 HSP90AB1P08238 724 aaKnown RBP12.92□□□□□ -0.34
PTPN12-216ENST00000523952 CDCA8Q53HL2 280 aa12.92□□□□□ -0.34
PTPN12-216ENST00000523952 ERVV-2B6SEH9 535 aa12.91□□□□□ -0.34
PTPN12-216ENST00000523952 VEGFAP15692 232 aaPredicted RBP12.91□□□□□ -0.34
PTPN12-216ENST00000523952 KCNA3P22001 575 aa12.91□□□□□ -0.34
PTPN12-216ENST00000523952 CABP4P57796 275 aa12.91□□□□□ -0.34
PTPN12-216ENST00000523952 EYA1Q99502 592 aa12.91□□□□□ -0.34
PTPN12-216ENST00000523952 ZC3H4Q9UPT8 1303 aaKnown RBP12.9□□□□□ -0.34
PTPN12-216ENST00000523952 CHRNA5P30532 468 aa12.9□□□□□ -0.34
PTPN12-216ENST00000523952 WASHC2AQ641Q2 1341 aa12.89□□□□□ -0.35
PTPN12-216ENST00000523952 FER1L6Q2WGJ9 1857 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms