RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 CLCN1P35523 988 aa21.92■■□□□ 1.1
IKBKB-228ENST00000523517 ATP8B2P98198 1209 aa21.92■■□□□ 1.1
IKBKB-228ENST00000523517 FMN2Q9NZ56 1722 aa21.92■■□□□ 1.1
IKBKB-228ENST00000523517 ARHGAP23Q9P227 1491 aa21.92■■□□□ 1.1
IKBKB-228ENST00000523517 SLIT1O75093 1534 aa21.92■■□□□ 1.1
IKBKB-228ENST00000523517 HOXC9P31274 260 aa21.91■■□□□ 1.1
IKBKB-228ENST00000523517 MCTP1Q6DN14 999 aa21.91■■□□□ 1.1
IKBKB-228ENST00000523517 SOS1Q07889 1333 aaPredicted RBP21.91■■□□□ 1.1
IKBKB-228ENST00000523517 PNMA6EA0A0J9YXQ4 647 aa21.91■■□□□ 1.1
IKBKB-228ENST00000523517 PKP1Q13835 747 aa21.91■■□□□ 1.1
IKBKB-228ENST00000523517 ZGPATQ8N5A5 531 aaKnown RBP21.91■■□□□ 1.1
IKBKB-228ENST00000523517 TSHZ3Q63HK5 1081 aa21.9■■□□□ 1.1
IKBKB-228ENST00000523517 IL17REQ8NFR9 667 aa21.9■■□□□ 1.1
IKBKB-228ENST00000523517 NECTIN2Q92692 538 aa21.9■■□□□ 1.1
IKBKB-228ENST00000523517 IBTKQ9P2D0 1353 aaPredicted RBP21.9■■□□□ 1.1
IKBKB-228ENST00000523517 MX1P20591 662 aa21.89■■□□□ 1.1
IKBKB-228ENST00000523517 ESYT1Q9BSJ8 1104 aa21.89■■□□□ 1.1
IKBKB-228ENST00000523517 BABAM1Q9NWV8 329 aa21.89■■□□□ 1.1
IKBKB-228ENST00000523517 PIK3C2AO00443 1686 aa21.89■■□□□ 1.09
IKBKB-228ENST00000523517 MAP3K5Q99683 1374 aa21.89■■□□□ 1.09
IKBKB-228ENST00000523517 TAF7Q15545 349 aaPredicted RBP21.88■■□□□ 1.09
IKBKB-228ENST00000523517 LMBRD1Q9NUN5 540 aa21.88■■□□□ 1.09
IKBKB-228ENST00000523517 LRRC37A3O60309 1634 aa21.88■■□□□ 1.09
IKBKB-228ENST00000523517 NUTM2GQ5VZR2 741 aa21.88■■□□□ 1.09
IKBKB-228ENST00000523517 LRRFIP2Q9Y608 721 aaKnown RBP21.87■■□□□ 1.09
IKBKB-228ENST00000523517 ANKARQ7Z5J8 1434 aa21.87■■□□□ 1.09
IKBKB-228ENST00000523517 STAP2Q9UGK3 403 aa21.87■■□□□ 1.09
IKBKB-228ENST00000523517 ZDHHC9Q9Y397 364 aa21.86■■□□□ 1.09
IKBKB-228ENST00000523517 NWD1Q149M9 1564 aa21.86■■□□□ 1.09
IKBKB-228ENST00000523517 NEK4P51957 841 aa21.85■■□□□ 1.09
IKBKB-228ENST00000523517 THEMISQ8N1K5 641 aaPredicted RBP21.85■■□□□ 1.09
IKBKB-228ENST00000523517 ESPNB1AK53 854 aa21.85■■□□□ 1.09
IKBKB-228ENST00000523517 CHMLP26374 656 aa21.85■■□□□ 1.09
IKBKB-228ENST00000523517 TRIM44Q96DX7 344 aaPredicted RBP21.85■■□□□ 1.09
IKBKB-228ENST00000523517 LTV1Q96GA3 475 aaPredicted RBP21.85■■□□□ 1.09
IKBKB-228ENST00000523517 SRCIN1Q9C0H9 1055 aa21.85■■□□□ 1.09
IKBKB-228ENST00000523517 USP44Q9H0E7 712 aa21.85■■□□□ 1.09
IKBKB-228ENST00000523517 MCCP23508 829 aa21.84■■□□□ 1.09
IKBKB-228ENST00000523517 ZNF445P59923 1031 aa21.84■■□□□ 1.09
IKBKB-228ENST00000523517 PLPPR3Q6T4P5 718 aa21.84■■□□□ 1.09
IKBKB-228ENST00000523517 ABTB2Q8N961 1025 aa21.84■■□□□ 1.09
IKBKB-228ENST00000523517 TRIM6-TRIM34B2RNG4 842 aa21.83■■□□□ 1.09
IKBKB-228ENST00000523517 NASPP49321 788 aaPredicted RBP21.83■■□□□ 1.09
IKBKB-228ENST00000523517 MCM2P49736 904 aa21.83■■□□□ 1.09
IKBKB-228ENST00000523517 RILPL2Q969X0 211 aa21.83■■□□□ 1.09
IKBKB-228ENST00000523517 UBTFL1P0CB47 393 aaPredicted RBP21.83■■□□□ 1.08
IKBKB-228ENST00000523517 NCLP19338 710 aaKnown RBP21.83■■□□□ 1.08
IKBKB-228ENST00000523517 TMX3Q96JJ7 454 aa21.83■■□□□ 1.08
IKBKB-228ENST00000523517 PXDNLA1KZ92 1463 aa21.82■■□□□ 1.08
IKBKB-228ENST00000523517 CAVIN1Q6NZI2 390 aaKnown RBP21.82■■□□□ 1.08
IKBKB-228ENST00000523517 FAM208AQ9UK61 1670 aaKnown RBP21.82■■□□□ 1.08
IKBKB-228ENST00000523517 XRN1Q8IZH2 1706 aaKnown RBP21.82■■□□□ 1.08
IKBKB-228ENST00000523517 KCNA6P17658 529 aa21.82■■□□□ 1.08
IKBKB-228ENST00000523517 ANAPC15P60006 121 aa21.82■■□□□ 1.08
IKBKB-228ENST00000523517 CCDC173Q0VFZ6 552 aa21.82■■□□□ 1.08
IKBKB-228ENST00000523517 HDGFL1Q5TGJ6 251 aa21.82■■□□□ 1.08
IKBKB-228ENST00000523517 ERBB4Q15303 1308 aa21.82■■□□□ 1.08
IKBKB-228ENST00000523517 AOX1Q06278 1338 aa21.81■■□□□ 1.08
IKBKB-228ENST00000523517 PRPF40AO75400 957 aaKnown RBP21.81■■□□□ 1.08
IKBKB-228ENST00000523517 ZSCAN23Q3MJ62 389 aa21.81■■□□□ 1.08
IKBKB-228ENST00000523517 PPP1R9BQ96SB3 815 aa21.81■■□□□ 1.08
IKBKB-228ENST00000523517 ANO2Q9NQ90 1003 aa21.81■■□□□ 1.08
IKBKB-228ENST00000523517 PALD1Q9ULE6 856 aa21.81■■□□□ 1.08
IKBKB-228ENST00000523517 RGPD8O14715 1765 aaPredicted RBP21.8■■□□□ 1.08
IKBKB-228ENST00000523517 SSH3Q8TE77 659 aa21.8■■□□□ 1.08
IKBKB-228ENST00000523517 PHAXQ9H814 394 aaKnown RBP21.8■■□□□ 1.08
IKBKB-228ENST00000523517 UNC5CLQ8IV45 518 aa21.79■■□□□ 1.08
IKBKB-228ENST00000523517 USHBP1Q8N6Y0 703 aa21.79■■□□□ 1.08
IKBKB-228ENST00000523517 CUL4AQ13619 759 aa21.79■■□□□ 1.08
IKBKB-228ENST00000523517 IL17RAQ96F46 866 aa21.79■■□□□ 1.08
IKBKB-228ENST00000523517 RAB11FIP3O75154 756 aa21.77■■□□□ 1.08
IKBKB-228ENST00000523517 GPT2Q8TD30 523 aa21.77■■□□□ 1.08
IKBKB-228ENST00000523517 ANP32BQ92688 251 aaKnown RBP21.77■■□□□ 1.08
IKBKB-228ENST00000523517 IL1RAPL2Q9NP60 686 aa21.77■■□□□ 1.08
IKBKB-228ENST00000523517 POLA2Q14181 598 aa21.76■■□□□ 1.07
IKBKB-228ENST00000523517 CEMIPQ8WUJ3 1361 aa21.76■■□□□ 1.07
IKBKB-228ENST00000523517 PPP1R42Q7Z4L9 355 aa21.76■■□□□ 1.07
IKBKB-228ENST00000523517 C14orf37Q86TY3 774 aa21.76■■□□□ 1.07
IKBKB-228ENST00000523517 INTS4Q96HW7 963 aaKnown RBP21.75■■□□□ 1.07
IKBKB-228ENST00000523517 MARF1Q9Y4F3 1742 aaKnown RBP21.75■■□□□ 1.07
IKBKB-228ENST00000523517 SURF6O75683 361 aaKnown RBP21.75■■□□□ 1.07
IKBKB-228ENST00000523517 NUTM1Q86Y26 1132 aa21.75■■□□□ 1.07
IKBKB-228ENST00000523517 NAP1L5Q96NT1 182 aaPredicted RBP21.75■■□□□ 1.07
IKBKB-228ENST00000523517 EPB41L2O43491 1005 aaKnown RBP21.74■■□□□ 1.07
IKBKB-228ENST00000523517 BRD1O95696 1058 aa21.74■■□□□ 1.07
IKBKB-228ENST00000523517 IP6K1Q92551 441 aa21.74■■□□□ 1.07
IKBKB-228ENST00000523517 CHAMP1Q96JM3 812 aa21.74■■□□□ 1.07
IKBKB-228ENST00000523517 EIF4A1P60842 406 aaKnown RBP21.74■■□□□ 1.07
IKBKB-228ENST00000523517 USP54Q70EL1 1684 aa21.74■■□□□ 1.07
IKBKB-228ENST00000523517 AK9Q5TCS8 1911 aa21.73■■□□□ 1.07
IKBKB-228ENST00000523517 EIF2S2P20042 333 aaKnown RBP21.73■■□□□ 1.07
IKBKB-228ENST00000523517 FOXD4L5Q5VV16 416 aaPredicted RBP21.73■■□□□ 1.07
IKBKB-228ENST00000523517 FOXD4L4Q8WXT5 416 aaPredicted RBP21.73■■□□□ 1.07
IKBKB-228ENST00000523517 RHPN1Q8TCX5 695 aa21.73■■□□□ 1.07
IKBKB-228ENST00000523517 RBM27Q9P2N5 1060 aaKnown RBP21.73■■□□□ 1.07
IKBKB-228ENST00000523517 PHF8Q9UPP1 1060 aa21.73■■□□□ 1.07
IKBKB-228ENST00000523517 TUBGCP6Q96RT7 1819 aa21.72■■□□□ 1.07
IKBKB-228ENST00000523517 HOXB7P09629 217 aa21.72■■□□□ 1.07
IKBKB-228ENST00000523517 RBSNQ9H1K0 784 aa21.72■■□□□ 1.07
IKBKB-228ENST00000523517 IL25Q9H293 177 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms