RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 EIF4A1P60842 406 aaKnown RBP26.4■■□□□ 1.82
SQLE-206ENST00000523430 RBM19Q9Y4C8 960 aaKnown RBP26.4■■□□□ 1.82
SQLE-206ENST00000523430 PTPRCP08575 1304 aa26.4■■□□□ 1.82
SQLE-206ENST00000523430 SOS1Q07889 1333 aaPredicted RBP26.4■■□□□ 1.82
SQLE-206ENST00000523430 NECTIN2Q92692 538 aa26.39■■□□□ 1.82
SQLE-206ENST00000523430 STRN4Q9NRL3 753 aa26.39■■□□□ 1.82
SQLE-206ENST00000523430 G2E3Q7L622 706 aa26.38■■□□□ 1.81
SQLE-206ENST00000523430 CYP27B1O15528 508 aa26.37■■□□□ 1.81
SQLE-206ENST00000523430 CCDC30Q5VVM6 783 aa26.37■■□□□ 1.81
SQLE-206ENST00000523430 LARP1Q6PKG0 1096 aaKnown RBP26.37■■□□□ 1.81
SQLE-206ENST00000523430 COL14A1Q05707 1796 aaKnown RBP26.37■■□□□ 1.81
SQLE-206ENST00000523430 ZBTB7BO15156 539 aaPredicted RBP26.36■■□□□ 1.81
SQLE-206ENST00000523430 STK31Q9BXU1 1019 aa26.36■■□□□ 1.81
SQLE-206ENST00000523430 MRC1P22897 1456 aa26.36■■□□□ 1.81
SQLE-206ENST00000523430 IFNL2Q8IZJ0 200 aa26.36■■□□□ 1.81
SQLE-206ENST00000523430 CARD10Q9BWT7 1032 aa26.34■■□□□ 1.81
SQLE-206ENST00000523430 RWDD1Q9H446 243 aaPredicted RBP26.34■■□□□ 1.81
SQLE-206ENST00000523430 SHANK3Q9BYB0 1731 aa26.34■■□□□ 1.81
SQLE-206ENST00000523430 HDGFL1Q5TGJ6 251 aa26.34■■□□□ 1.81
SQLE-206ENST00000523430 EVA1CP58658 441 aa26.33■■□□□ 1.81
SQLE-206ENST00000523430 INTS3Q68E01 1043 aaKnown RBP26.32■■□□□ 1.8
SQLE-206ENST00000523430 C1orf115Q9H7X2 142 aa26.32■■□□□ 1.8
SQLE-206ENST00000523430 SLC52A2Q9HAB3 445 aa26.32■■□□□ 1.8
SQLE-206ENST00000523430 BTG4Q9NY30 223 aa26.32■■□□□ 1.8
SQLE-206ENST00000523430 HDAC1Q13547 482 aaPredicted RBP26.31■■□□□ 1.8
SQLE-206ENST00000523430 HOXB7P09629 217 aa26.3■■□□□ 1.8
SQLE-206ENST00000523430 FLIIQ13045 1269 aa26.3■■□□□ 1.8
SQLE-206ENST00000523430 RGS3P49796 1198 aa26.3■■□□□ 1.8
SQLE-206ENST00000523430 PIP4K2BP78356 416 aa26.3■■□□□ 1.8
SQLE-206ENST00000523430 DCAF5Q96JK2 942 aa26.3■■□□□ 1.8
SQLE-206ENST00000523430 F6X3S4 739 aa26.29■■□□□ 1.8
SQLE-206ENST00000523430 IL2RBP14784 551 aa26.29■■□□□ 1.8
SQLE-206ENST00000523430 CHMP4BQ9H444 224 aaKnown RBP26.29■■□□□ 1.8
SQLE-206ENST00000523430 HEG1Q9ULI3 1381 aa26.29■■□□□ 1.8
SQLE-206ENST00000523430 PCDH11XQ9BZA7 1347 aa26.28■■□□□ 1.8
SQLE-206ENST00000523430 PCDH11YQ9BZA8 1340 aa26.28■■□□□ 1.8
SQLE-206ENST00000523430 EIF2S2P20042 333 aaKnown RBP26.28■■□□□ 1.8
SQLE-206ENST00000523430 CACNA1FO60840 1977 aa26.27■■□□□ 1.8
SQLE-206ENST00000523430 C5P01031 1676 aa26.27■■□□□ 1.8
SQLE-206ENST00000523430 PLCH1Q4KWH8 1693 aa26.27■■□□□ 1.8
SQLE-206ENST00000523430 NFATC2IPQ8NCF5 419 aa26.27■■□□□ 1.8
SQLE-206ENST00000523430 ZCRB1Q8TBF4 217 aaKnown RBP26.27■■□□□ 1.8
SQLE-206ENST00000523430 TOM1O60784 492 aa26.26■■□□□ 1.79
SQLE-206ENST00000523430 HSP90AB1P08238 724 aaKnown RBP26.25■■□□□ 1.79
SQLE-206ENST00000523430 SLC39A6Q13433 755 aa26.25■■□□□ 1.79
SQLE-206ENST00000523430 FKBP5Q13451 457 aaPredicted RBP26.25■■□□□ 1.79
SQLE-206ENST00000523430 CHPF2Q9P2E5 772 aa26.25■■□□□ 1.79
SQLE-206ENST00000523430 USP35Q9P2H5 1018 aa26.25■■□□□ 1.79
SQLE-206ENST00000523430 N4BP2Q86UW6 1770 aaPredicted RBP26.25■■□□□ 1.79
SQLE-206ENST00000523430 PRAMEF22A3QJZ6 481 aa26.25■■□□□ 1.79
SQLE-206ENST00000523430 GIGYF1O75420 1035 aaPredicted RBP26.25■■□□□ 1.79
SQLE-206ENST00000523430 ZNF790Q6PG37 636 aa26.24■■□□□ 1.79
SQLE-206ENST00000523430 SLC4A10Q6U841 1118 aa26.24■■□□□ 1.79
SQLE-206ENST00000523430 PDZRN3Q9UPQ7 1066 aa26.24■■□□□ 1.79
SQLE-206ENST00000523430 PHAXQ9H814 394 aaKnown RBP26.23■■□□□ 1.79
SQLE-206ENST00000523430 PXDNLA1KZ92 1463 aa26.22■■□□□ 1.79
SQLE-206ENST00000523430 ATP10DQ9P241 1426 aa26.21■■□□□ 1.79
SQLE-206ENST00000523430 GLI3P10071 1580 aa26.21■■□□□ 1.79
SQLE-206ENST00000523430 PDE4AP27815 886 aa26.21■■□□□ 1.79
SQLE-206ENST00000523430 MEIS3Q99687 375 aa26.21■■□□□ 1.79
SQLE-206ENST00000523430 NRAPQ86VF7 1730 aa26.2■■□□□ 1.78
SQLE-206ENST00000523430 CCT4P50991 539 aaKnown RBP26.2■■□□□ 1.78
SQLE-206ENST00000523430 SIRT2Q8IXJ6 389 aa26.2■■□□□ 1.78
SQLE-206ENST00000523430 SMC5Q8IY18 1101 aa26.2■■□□□ 1.78
SQLE-206ENST00000523430 TOGARAM1Q9Y4F4 1720 aa26.2■■□□□ 1.78
SQLE-206ENST00000523430 ADAMTS2O95450 1211 aa26.19■■□□□ 1.78
SQLE-206ENST00000523430 ANXA1P04083 346 aa26.19■■□□□ 1.78
SQLE-206ENST00000523430 CABP4P57796 275 aa26.19■■□□□ 1.78
SQLE-206ENST00000523430 DISP2A7MBM2 1401 aa26.19■■□□□ 1.78
SQLE-206ENST00000523430 UBAP1LF5GYI3 381 aa26.19■■□□□ 1.78
SQLE-206ENST00000523430 WNK3Q9BYP7 1800 aa26.19■■□□□ 1.78
SQLE-206ENST00000523430 DDX54Q8TDD1 881 aaKnown RBP26.18■■□□□ 1.78
SQLE-206ENST00000523430 CHMP4AQ9BY43 222 aa26.17■■□□□ 1.78
SQLE-206ENST00000523430 BACH2Q9BYV9 841 aa26.17■■□□□ 1.78
SQLE-206ENST00000523430 PROSER3Q2NL68 480 aa26.17■■□□□ 1.78
SQLE-206ENST00000523430 ZNF496Q96IT1 587 aaPredicted RBP26.17■■□□□ 1.78
SQLE-206ENST00000523430 PAPPAQ13219 1627 aa26.16■■□□□ 1.78
SQLE-206ENST00000523430 NKX1-1Q15270 411 aaPredicted RBP26.16■■□□□ 1.78
SQLE-206ENST00000523430 DBF4Q9UBU7 674 aaPredicted RBP26.16■■□□□ 1.78
SQLE-206ENST00000523430 TTC5Q8N0Z6 440 aa26.15■■□□□ 1.78
SQLE-206ENST00000523430 NUTM2BA6NNL0 878 aaPredicted RBP26.14■■□□□ 1.78
SQLE-206ENST00000523430 NUTM2EB1AL46 878 aaPredicted RBP26.14■■□□□ 1.78
SQLE-206ENST00000523430 NUTM2AQ8IVF1 878 aaPredicted RBP26.14■■□□□ 1.78
SQLE-206ENST00000523430 UBR2Q8IWV8 1755 aa26.13■■□□□ 1.77
SQLE-206ENST00000523430 LAMB4A4D0S4 1761 aa26.12■■□□□ 1.77
SQLE-206ENST00000523430 ADCY9O60503 1353 aa26.12■■□□□ 1.77
SQLE-206ENST00000523430 ERVV-2B6SEH9 535 aa26.11■■□□□ 1.77
SQLE-206ENST00000523430 CEP85Q6P2H3 762 aa26.11■■□□□ 1.77
SQLE-206ENST00000523430 C8orf34Q49A92 452 aa26.11■■□□□ 1.77
SQLE-206ENST00000523430 KCPQ6ZWJ8 1503 aa26.1■■□□□ 1.77
SQLE-206ENST00000523430 ANKRD44Q8N8A2 993 aa26.1■■□□□ 1.77
SQLE-206ENST00000523430 FMNL2Q96PY5 1086 aa26.1■■□□□ 1.77
SQLE-206ENST00000523430 NUCB1Q02818 461 aa26.09■■□□□ 1.77
SQLE-206ENST00000523430 PDIA6Q15084 440 aa26.09■■□□□ 1.77
SQLE-206ENST00000523430 FAM161AQ3B820 660 aa26.09■■□□□ 1.77
SQLE-206ENST00000523430 PI4KAP2A4QPH2 592 aa26.08■■□□□ 1.77
SQLE-206ENST00000523430 PI4KAP1Q8N8J0 262 aa26.08■■□□□ 1.77
SQLE-206ENST00000523430 GCC1Q96CN9 775 aa26.08■■□□□ 1.77
SQLE-206ENST00000523430 NWD2Q9ULI1 1742 aa26.08■■□□□ 1.77
SQLE-206ENST00000523430 SNRPA1P09661 255 aaKnown RBP26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms