RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 USP17L21D6R901 530 aa9.51□□□□□ -0.89
LINC00534-203ENST00000523406 USP17L18D6R9N7 530 aa9.51□□□□□ -0.89
LINC00534-203ENST00000523406 USP17L22D6RA61 530 aa9.51□□□□□ -0.89
LINC00534-203ENST00000523406 USP17L17D6RBQ6 530 aa9.51□□□□□ -0.89
LINC00534-203ENST00000523406 USP17L19D6RCP7 530 aa9.51□□□□□ -0.89
LINC00534-203ENST00000523406 USP17L20D6RJB6 530 aa9.51□□□□□ -0.89
LINC00534-203ENST00000523406 RASA1P20936 1047 aa9.51□□□□□ -0.89
LINC00534-203ENST00000523406 CLDN10P78369 228 aa9.51□□□□□ -0.89
LINC00534-203ENST00000523406 DHX9Q08211 1270 aaKnown RBP9.51□□□□□ -0.89
LINC00534-203ENST00000523406 USP17L24Q0WX57 530 aa9.51□□□□□ -0.89
LINC00534-203ENST00000523406 FOXC1Q12948 553 aa9.51□□□□□ -0.89
LINC00534-203ENST00000523406 USP4Q13107 963 aa9.51□□□□□ -0.89
LINC00534-203ENST00000523406 TRIM50Q86XT4 487 aa9.51□□□□□ -0.89
LINC00534-203ENST00000523406 ZMIZ1Q9ULJ6 1067 aa9.51□□□□□ -0.89
LINC00534-203ENST00000523406 USTQ9Y2C2 406 aa9.51□□□□□ -0.89
LINC00534-203ENST00000523406 CSB-PGBD3P0DP91 1061 aa9.5□□□□□ -0.89
LINC00534-203ENST00000523406 ERVK-9P63128 1117 aa9.5□□□□□ -0.89
LINC00534-203ENST00000523406 LARP1Q6PKG0 1096 aaKnown RBP9.5□□□□□ -0.89
LINC00534-203ENST00000523406 CCDC116Q8IYX3 515 aa9.5□□□□□ -0.89
LINC00534-203ENST00000523406 OGFOD1Q8N543 542 aa9.5□□□□□ -0.89
LINC00534-203ENST00000523406 SIRT1Q96EB6 747 aa9.5□□□□□ -0.89
LINC00534-203ENST00000523406 TMPRSS4Q9NRS4 437 aa9.5□□□□□ -0.89
LINC00534-203ENST00000523406 NOVA2Q9UNW9 492 aaKnown RBP9.5□□□□□ -0.89
LINC00534-203ENST00000523406 PCDHGA11Q9Y5H2 935 aa9.5□□□□□ -0.89
LINC00534-203ENST00000523406 EPRSP07814 1512 aaKnown RBP9.5□□□□□ -0.89
LINC00534-203ENST00000523406 TMEM88BA6NKF7 163 aa9.49□□□□□ -0.89
LINC00534-203ENST00000523406 ZBTB7BO15156 539 aaPredicted RBP9.49□□□□□ -0.89
LINC00534-203ENST00000523406 NR3C2P08235 984 aa9.49□□□□□ -0.89
LINC00534-203ENST00000523406 SCTRP47872 440 aa9.49□□□□□ -0.89
LINC00534-203ENST00000523406 ATP1A2P50993 1020 aa9.49□□□□□ -0.89
LINC00534-203ENST00000523406 GTF2IP78347 998 aa9.49□□□□□ -0.89
LINC00534-203ENST00000523406 SNIP1Q8TAD8 396 aaKnown RBP9.49□□□□□ -0.89
LINC00534-203ENST00000523406 EHBP1L1Q8N3D4 1523 aa9.48□□□□□ -0.89
LINC00534-203ENST00000523406 DKK1O94907 266 aa9.48□□□□□ -0.89
LINC00534-203ENST00000523406 ALDH1A1P00352 501 aa9.48□□□□□ -0.89
LINC00534-203ENST00000523406 PDE4CQ08493 712 aa9.48□□□□□ -0.89
LINC00534-203ENST00000523406 PPP1R26Q5T8A7 1209 aaPredicted RBP9.48□□□□□ -0.89
LINC00534-203ENST00000523406 LARGE2Q8N3Y3 721 aa9.48□□□□□ -0.89
LINC00534-203ENST00000523406 DNAAF2Q9NVR5 837 aaKnown RBP9.48□□□□□ -0.89
LINC00534-203ENST00000523406 KIAA1024Q9UPX6 916 aa9.48□□□□□ -0.89
LINC00534-203ENST00000523406 PRG4Q92954 1404 aaPredicted RBP9.48□□□□□ -0.89
LINC00534-203ENST00000523406 NCOA2Q15596 1464 aa9.47□□□□□ -0.89
LINC00534-203ENST00000523406 CC2D2BQ6DHV5 1058 aa9.47□□□□□ -0.89
LINC00534-203ENST00000523406 TRIM67Q6ZTA4 783 aa9.47□□□□□ -0.89
LINC00534-203ENST00000523406 SIX5Q8N196 739 aa9.47□□□□□ -0.89
LINC00534-203ENST00000523406 ZNF784Q8NCA9 323 aaPredicted RBP9.47□□□□□ -0.89
LINC00534-203ENST00000523406 STK32AQ8WU08 396 aa9.47□□□□□ -0.89
LINC00534-203ENST00000523406 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.47□□□□□ -0.891e-6■□□□□ 9.9
LINC00534-203ENST00000523406 FGD6Q6ZV73 1430 aa9.47□□□□□ -0.89
LINC00534-203ENST00000523406 LILRA1O75019 489 aa9.46□□□□□ -0.9
LINC00534-203ENST00000523406 MYCP01106 439 aaPredicted RBP9.46□□□□□ -0.9
LINC00534-203ENST00000523406 PRR20EP86478 221 aa9.46□□□□□ -0.9
LINC00534-203ENST00000523406 PRR20CP86479 221 aa9.46□□□□□ -0.9
LINC00534-203ENST00000523406 PRR20DP86480 221 aa9.46□□□□□ -0.9
LINC00534-203ENST00000523406 PRR20BP86481 221 aa9.46□□□□□ -0.9
LINC00534-203ENST00000523406 PRR20AP86496 221 aa9.46□□□□□ -0.9
LINC00534-203ENST00000523406 TMEM164Q5U3C3 297 aa9.46□□□□□ -0.9
LINC00534-203ENST00000523406 ANKMY2Q8IV38 441 aa9.46□□□□□ -0.9
LINC00534-203ENST00000523406 TOR4AQ9NXH8 423 aa9.46□□□□□ -0.9
LINC00534-203ENST00000523406 PTPRGP23470 1445 aa9.46□□□□□ -0.9
LINC00534-203ENST00000523406 MYOM3Q5VTT5 1437 aa9.46□□□□□ -0.9
LINC00534-203ENST00000523406 CDK13Q14004 1512 aaKnown RBP9.46□□□□□ -0.9
LINC00534-203ENST00000523406 RAPGEF6Q8TEU7 1601 aa9.45□□□□□ -0.9
LINC00534-203ENST00000523406 SUPT6HQ7KZ85 1726 aaKnown RBP9.45□□□□□ -0.9
LINC00534-203ENST00000523406 CARNS1A5YM72 827 aa9.45□□□□□ -0.9
LINC00534-203ENST00000523406 NNTQ13423 1086 aa9.45□□□□□ -0.9
LINC00534-203ENST00000523406 TRIM52Q96A61 297 aa9.45□□□□□ -0.9
LINC00534-203ENST00000523406 ZNF594Q96JF6 807 aaPredicted RBP9.45□□□□□ -0.9
LINC00534-203ENST00000523406 OSBPL3Q9H4L5 887 aa9.45□□□□□ -0.9
LINC00534-203ENST00000523406 CYLDQ9NQC7 956 aa9.45□□□□□ -0.9
LINC00534-203ENST00000523406 EMILIN1Q9Y6C2 1016 aa9.45□□□□□ -0.9
LINC00534-203ENST00000523406 NUP153P49790 1475 aaKnown RBP9.45□□□□□ -0.9
LINC00534-203ENST00000523406 PLEKHD1A6NEE1 506 aa9.44□□□□□ -0.9
LINC00534-203ENST00000523406 J3QL48 77 aa9.44□□□□□ -0.9
LINC00534-203ENST00000523406 TNFRSF10AO00220 468 aa9.44□□□□□ -0.9
LINC00534-203ENST00000523406 RGS20O76081 388 aa9.44□□□□□ -0.9
LINC00534-203ENST00000523406 MYT1Q01538 1121 aa9.44□□□□□ -0.9
LINC00534-203ENST00000523406 DPYDQ12882 1025 aa9.44□□□□□ -0.9
LINC00534-203ENST00000523406 CYP4X1Q8N118 509 aa9.44□□□□□ -0.9
LINC00534-203ENST00000523406 FAM200AQ8TCP9 573 aa9.44□□□□□ -0.9
LINC00534-203ENST00000523406 WASF2Q9Y6W5 498 aa9.44□□□□□ -0.9
LINC00534-203ENST00000523406 PLB1Q6P1J6 1458 aa9.44□□□□□ -0.9
LINC00534-203ENST00000523406 CHD1O14646 1710 aa9.44□□□□□ -0.9
LINC00534-203ENST00000523406 SETD5Q9C0A6 1442 aa9.43□□□□□ -0.9
LINC00534-203ENST00000523406 FAM69CQ0P6D2 419 aa9.43□□□□□ -0.9
LINC00534-203ENST00000523406 CCDC102BQ68D86 513 aa9.43□□□□□ -0.9
LINC00534-203ENST00000523406 KLF16Q9BXK1 252 aaPredicted RBP9.43□□□□□ -0.9
LINC00534-203ENST00000523406 PGPEP1Q9NXJ5 209 aa9.43□□□□□ -0.9
LINC00534-203ENST00000523406 LRRIQ1Q96JM4 1722 aa9.42□□□□□ -0.9
LINC00534-203ENST00000523406 TTC24A2A3L6 582 aaPredicted RBP9.42□□□□□ -0.9
LINC00534-203ENST00000523406 SMPD1P17405 629 aa9.42□□□□□ -0.9
LINC00534-203ENST00000523406 ADD1P35611 737 aaKnown RBP9.42□□□□□ -0.9
LINC00534-203ENST00000523406 MAGI3Q5TCQ9 1506 aa9.41□□□□□ -0.9
LINC00534-203ENST00000523406 RAB3GAP2Q9H2M9 1393 aa9.41□□□□□ -0.9
LINC00534-203ENST00000523406 CLSPNQ9HAW4 1339 aa9.41□□□□□ -0.9
LINC00534-203ENST00000523406 TPCN2Q8NHX9 752 aa9.41□□□□□ -0.9
LINC00534-203ENST00000523406 TROQ12816 1431 aaPredicted RBP9.4□□□□□ -0.9
LINC00534-203ENST00000523406 SEC13P55735 322 aa9.4□□□□□ -0.9
LINC00534-203ENST00000523406 PSME1Q06323 249 aa9.4□□□□□ -0.9
LINC00534-203ENST00000523406 ESF1Q9H501 851 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms