RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 CDCA8Q53HL2 280 aa9.32□□□□□ -0.92
SKP1-211ENST00000523359 USP17L2Q6R6M4 530 aa9.32□□□□□ -0.92
SKP1-211ENST00000523359 USP17L1Q7RTZ2 530 aa9.32□□□□□ -0.92
SKP1-211ENST00000523359 PBXIP1Q96AQ6 731 aa9.32□□□□□ -0.92
SKP1-211ENST00000523359 ZNF837Q96EG3 531 aaPredicted RBP9.32□□□□□ -0.92
SKP1-211ENST00000523359 GRIP2Q9C0E4 1043 aa9.32□□□□□ -0.92
SKP1-211ENST00000523359 MYCP01106 439 aaPredicted RBP9.31□□□□□ -0.92
SKP1-211ENST00000523359 SRPK2P78362 688 aaKnown RBP9.31□□□□□ -0.92
SKP1-211ENST00000523359 GAS2L1Q99501 681 aaPredicted RBP9.31□□□□□ -0.92
SKP1-211ENST00000523359 CHIC2Q9UKJ5 165 aa9.31□□□□□ -0.92
SKP1-211ENST00000523359 GPR25O00155 361 aa9.3□□□□□ -0.92
SKP1-211ENST00000523359 PPP1R15AO75807 674 aaPredicted RBP9.3□□□□□ -0.92
SKP1-211ENST00000523359 SLURP2P0DP57 97 aa9.3□□□□□ -0.92
SKP1-211ENST00000523359 NCOA4Q13772 614 aa9.3□□□□□ -0.92
SKP1-211ENST00000523359 GAS6Q14393 721 aa9.3□□□□□ -0.92
SKP1-211ENST00000523359 NBPF10Q6P3W6 841 aaKnown RBP9.3□□□□□ -0.92
SKP1-211ENST00000523359 PLEKHM2Q8IWE5 1019 aa9.3□□□□□ -0.92
SKP1-211ENST00000523359 TRIM22Q8IYM9 498 aa9.3□□□□□ -0.92
SKP1-211ENST00000523359 NBPF15Q8N660 670 aa9.3□□□□□ -0.92
SKP1-211ENST00000523359 ADAMTS8Q9UP79 889 aa9.3□□□□□ -0.92
SKP1-211ENST00000523359 DOLKQ9UPQ8 538 aa9.3□□□□□ -0.92
SKP1-211ENST00000523359 DYRK1BQ9Y463 629 aa9.3□□□□□ -0.92
SKP1-211ENST00000523359 ADAMTS2O95450 1211 aa9.29□□□□□ -0.92
SKP1-211ENST00000523359 GNRH1P01148 92 aa9.29□□□□□ -0.92
SKP1-211ENST00000523359 IL2RAP01589 272 aa9.29□□□□□ -0.92
SKP1-211ENST00000523359 DBN1Q16643 649 aa9.29□□□□□ -0.92
SKP1-211ENST00000523359 MAP7D1Q3KQU3 841 aa9.29□□□□□ -0.92
SKP1-211ENST00000523359 OXLD1Q5BKU9 147 aa9.29□□□□□ -0.92
SKP1-211ENST00000523359 CNKSR1Q969H4 720 aa9.29□□□□□ -0.92
SKP1-211ENST00000523359 EML3Q32P44 896 aa9.28□□□□□ -0.92
SKP1-211ENST00000523359 KANK4Q5T7N3 995 aaPredicted RBP9.28□□□□□ -0.92
SKP1-211ENST00000523359 VRTNQ9H8Y1 702 aa9.28□□□□□ -0.92
SKP1-211ENST00000523359 ACIN1Q9UKV3 1341 aaKnown RBP9.28□□□□□ -0.92
SKP1-211ENST00000523359 SPATA31C2B4DYI2 1134 aa9.27□□□□□ -0.93
SKP1-211ENST00000523359 WASLO00401 505 aaPredicted RBP9.27□□□□□ -0.93
SKP1-211ENST00000523359 TAS1R3Q7RTX0 852 aa9.27□□□□□ -0.93
SKP1-211ENST00000523359 ESYT1Q9BSJ8 1104 aa9.27□□□□□ -0.93
SKP1-211ENST00000523359 TIMMDC1Q9NPL8 285 aa9.27□□□□□ -0.93
SKP1-211ENST00000523359 MKRN1Q9UHC7 482 aaKnown RBP9.27□□□□□ -0.93
SKP1-211ENST00000523359 LZTS3O60299 673 aaPredicted RBP9.26□□□□□ -0.93
SKP1-211ENST00000523359 STAU1O95793 577 aaKnown RBP9.26□□□□□ -0.93
SKP1-211ENST00000523359 CENPCQ03188 943 aa9.26□□□□□ -0.93
SKP1-211ENST00000523359 SRSF11Q05519 484 aaKnown RBP9.26□□□□□ -0.93
SKP1-211ENST00000523359 KCNMA1Q12791 1236 aa9.26□□□□□ -0.93
SKP1-211ENST00000523359 GTPBP3Q969Y2 492 aaKnown RBP9.26□□□□□ -0.93
SKP1-211ENST00000523359 GMCL1Q96IK5 515 aa9.26□□□□□ -0.93
SKP1-211ENST00000523359 H7C1W4 665 aa9.25□□□□□ -0.93
SKP1-211ENST00000523359 ARHGEF15O94989 841 aa9.25□□□□□ -0.93
SKP1-211ENST00000523359 PHKA2P46019 1235 aa9.25□□□□□ -0.93
SKP1-211ENST00000523359 GSK3AP49840 483 aa9.25□□□□□ -0.93
SKP1-211ENST00000523359 FOXR1Q6PIV2 292 aa9.25□□□□□ -0.93
SKP1-211ENST00000523359 LYPD4Q6UWN0 246 aa9.25□□□□□ -0.93
SKP1-211ENST00000523359 RETREG2Q8NC44 543 aa9.25□□□□□ -0.93
SKP1-211ENST00000523359 WDR44Q5JSH3 913 aa9.24□□□□□ -0.93
SKP1-211ENST00000523359 ZSCAN10Q96SZ4 725 aaPredicted RBP9.24□□□□□ -0.93
SKP1-211ENST00000523359 ATG7O95352 703 aa9.23□□□□□ -0.93
SKP1-211ENST00000523359 USP4Q13107 963 aa9.23□□□□□ -0.93
SKP1-211ENST00000523359 XAGE2Q96GT9 111 aa9.23□□□□□ -0.93
SKP1-211ENST00000523359 GPAMQ9HCL2 828 aa9.23□□□□□ -0.93
SKP1-211ENST00000523359 MBIPQ9NS73 344 aa9.23□□□□□ -0.93
SKP1-211ENST00000523359 NOD1Q9Y239 953 aa9.23□□□□□ -0.93
SKP1-211ENST00000523359 HRH3Q9Y5N1 445 aa9.23□□□□□ -0.93
SKP1-211ENST00000523359 F11P03951 625 aa9.22□□□□□ -0.93
SKP1-211ENST00000523359 ESCO1Q5FWF5 840 aa9.22□□□□□ -0.93
SKP1-211ENST00000523359 TRERF1Q96PN7 1200 aa9.22□□□□□ -0.93
SKP1-211ENST00000523359 FHDC1Q9C0D6 1143 aaPredicted RBP9.22□□□□□ -0.93
SKP1-211ENST00000523359 NUCKS1Q9H1E3 243 aaKnown RBP9.22□□□□□ -0.93
SKP1-211ENST00000523359 ETNK1Q9HBU6 452 aa9.22□□□□□ -0.93
SKP1-211ENST00000523359 IGF1RP08069 1367 aa9.22□□□□□ -0.93
SKP1-211ENST00000523359 USP17L15C9J2P7 530 aa9.21□□□□□ -0.94
SKP1-211ENST00000523359 USP17L10C9JJH3 530 aa9.21□□□□□ -0.94
SKP1-211ENST00000523359 USP17L13C9JLJ4 530 aa9.21□□□□□ -0.94
SKP1-211ENST00000523359 USP17L12C9JPN9 530 aa9.21□□□□□ -0.94
SKP1-211ENST00000523359 USP17L11C9JVI0 530 aa9.21□□□□□ -0.94
SKP1-211ENST00000523359 USP17L21D6R901 530 aa9.21□□□□□ -0.94
SKP1-211ENST00000523359 USP17L18D6R9N7 530 aa9.21□□□□□ -0.94
SKP1-211ENST00000523359 USP17L22D6RA61 530 aa9.21□□□□□ -0.94
SKP1-211ENST00000523359 USP17L17D6RBQ6 530 aa9.21□□□□□ -0.94
SKP1-211ENST00000523359 USP17L19D6RCP7 530 aa9.21□□□□□ -0.94
SKP1-211ENST00000523359 USP17L20D6RJB6 530 aa9.21□□□□□ -0.94
SKP1-211ENST00000523359 RNF225M0QZC1 329 aaPredicted RBP9.21□□□□□ -0.94
SKP1-211ENST00000523359 CELA2BP08218 269 aaPredicted RBP9.21□□□□□ -0.94
SKP1-211ENST00000523359 RASA1P20936 1047 aa9.21□□□□□ -0.94
SKP1-211ENST00000523359 MAP3K10Q02779 954 aa9.21□□□□□ -0.94
SKP1-211ENST00000523359 RASSF7Q02833 373 aa9.21□□□□□ -0.94
SKP1-211ENST00000523359 USP17L24Q0WX57 530 aa9.21□□□□□ -0.94
SKP1-211ENST00000523359 CRTC2Q53ET0 693 aaPredicted RBP9.21□□□□□ -0.94
SKP1-211ENST00000523359 TMEM214Q6NUQ4 689 aaKnown RBP9.21□□□□□ -0.94
SKP1-211ENST00000523359 GTF2E1P29083 439 aaPredicted RBP9.2□□□□□ -0.94
SKP1-211ENST00000523359 MARSP56192 900 aaKnown RBP9.2□□□□□ -0.94
SKP1-211ENST00000523359 GTF2IP78347 998 aa9.2□□□□□ -0.94
SKP1-211ENST00000523359 CLDN10P78369 228 aa9.2□□□□□ -0.94
SKP1-211ENST00000523359 C4orf17Q53FE4 359 aa9.2□□□□□ -0.94
SKP1-211ENST00000523359 GNASQ5JWF2 1037 aa9.2□□□□□ -0.94
SKP1-211ENST00000523359 LARP1Q6PKG0 1096 aaKnown RBP9.2□□□□□ -0.94
SKP1-211ENST00000523359 TRIM50Q86XT4 487 aa9.2□□□□□ -0.94
SKP1-211ENST00000523359 TMEM151AQ8N4L1 468 aa9.2□□□□□ -0.94
SKP1-211ENST00000523359 OGFOD1Q8N543 542 aa9.2□□□□□ -0.94
SKP1-211ENST00000523359 KCTD17Q8N5Z5 321 aa9.2□□□□□ -0.94
SKP1-211ENST00000523359 SIRT1Q96EB6 747 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms