RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 SIK1P57059 783 aa19.82■□□□□ 0.76
NKX3-1-202ENST00000523261 PIGBQ92521 554 aa19.82■□□□□ 0.76
NKX3-1-202ENST00000523261 ITPK1Q13572 414 aa19.81■□□□□ 0.76
NKX3-1-202ENST00000523261 L3MBTL2Q969R5 705 aa19.81■□□□□ 0.76
NKX3-1-202ENST00000523261 TERF2IPQ9NYB0 399 aa19.81■□□□□ 0.76
NKX3-1-202ENST00000523261 RNF181Q9P0P0 153 aa19.81■□□□□ 0.76
NKX3-1-202ENST00000523261 RTL1A6NKG5 1358 aa19.81■□□□□ 0.76
NKX3-1-202ENST00000523261 CCDC87Q9NVE4 849 aa19.8■□□□□ 0.76
NKX3-1-202ENST00000523261 C4AP0C0L4 1744 aa19.79■□□□□ 0.76
NKX3-1-202ENST00000523261 NLGN1Q8N2Q7 840 aa19.79■□□□□ 0.76
NKX3-1-202ENST00000523261 COG3Q96JB2 828 aa19.79■□□□□ 0.76
NKX3-1-202ENST00000523261 DCAF5Q96JK2 942 aa19.79■□□□□ 0.76
NKX3-1-202ENST00000523261 SBF1O95248 1867 aa19.78■□□□□ 0.76
NKX3-1-202ENST00000523261 TMF1P82094 1093 aa19.77■□□□□ 0.76
NKX3-1-202ENST00000523261 PIM2Q9P1W9 311 aa19.76■□□□□ 0.75
NKX3-1-202ENST00000523261 SMG6Q86US8 1419 aaKnown RBP19.76■□□□□ 0.75
NKX3-1-202ENST00000523261 RRS1Q15050 365 aaKnown RBP19.75■□□□□ 0.75
NKX3-1-202ENST00000523261 PCDH10Q9P2E7 1040 aa19.75■□□□□ 0.75
NKX3-1-202ENST00000523261 ATP6V1AP38606 617 aa19.74■□□□□ 0.75
NKX3-1-202ENST00000523261 NKX1-1Q15270 411 aaPredicted RBP19.74■□□□□ 0.75
NKX3-1-202ENST00000523261 DALRD3Q5D0E6 543 aaKnown RBP19.74■□□□□ 0.75
NKX3-1-202ENST00000523261 TRAPPC3LQ5T215 181 aa19.73■□□□□ 0.75
NKX3-1-202ENST00000523261 ASAP1Q9ULH1 1129 aa19.73■□□□□ 0.75
NKX3-1-202ENST00000523261 PARP3Q9Y6F1 533 aa19.73■□□□□ 0.75
NKX3-1-202ENST00000523261 GYS1P13807 737 aa19.72■□□□□ 0.75
NKX3-1-202ENST00000523261 VEGFAP15692 232 aaPredicted RBP19.72■□□□□ 0.75
NKX3-1-202ENST00000523261 RTCBQ9Y3I0 505 aaKnown RBP19.72■□□□□ 0.75
NKX3-1-202ENST00000523261 ZC3H4Q9UPT8 1303 aaKnown RBP19.72■□□□□ 0.75
NKX3-1-202ENST00000523261 KDM6AO15550 1401 aaPredicted RBP19.7■□□□□ 0.74
NKX3-1-202ENST00000523261 ARHGEF1Q92888 912 aaKnown RBP19.7■□□□□ 0.74
NKX3-1-202ENST00000523261 TMOD3Q9NYL9 352 aa19.7■□□□□ 0.74
NKX3-1-202ENST00000523261 INSRP06213 1382 aa19.7■□□□□ 0.74
NKX3-1-202ENST00000523261 FOXN1O15353 648 aa19.69■□□□□ 0.74
NKX3-1-202ENST00000523261 ADRA2BP18089 450 aa19.69■□□□□ 0.74
NKX3-1-202ENST00000523261 PRDM10Q9NQV6 1147 aa19.69■□□□□ 0.74
NKX3-1-202ENST00000523261 KDRP35968 1356 aa19.69■□□□□ 0.74
NKX3-1-202ENST00000523261 GLTPD2A6NH11 291 aa19.68■□□□□ 0.74
NKX3-1-202ENST00000523261 HSP90AB2PQ58FF8 381 aa19.68■□□□□ 0.74
NKX3-1-202ENST00000523261 PUS7Q96PZ0 661 aaKnown RBP19.68■□□□□ 0.74
NKX3-1-202ENST00000523261 ATG3Q9NT62 314 aa19.67■□□□□ 0.74
NKX3-1-202ENST00000523261 CHRNA5P30532 468 aa19.66■□□□□ 0.74
NKX3-1-202ENST00000523261 RASSF7Q02833 373 aa19.66■□□□□ 0.74
NKX3-1-202ENST00000523261 FAM161AQ3B820 660 aa19.66■□□□□ 0.74
NKX3-1-202ENST00000523261 SLC4A9Q96Q91 983 aa19.66■□□□□ 0.74
NKX3-1-202ENST00000523261 RFC4P35249 363 aa19.65■□□□□ 0.74
NKX3-1-202ENST00000523261 RC3H1Q5TC82 1133 aaKnown RBP19.65■□□□□ 0.74
NKX3-1-202ENST00000523261 MKRN1Q9UHC7 482 aaKnown RBP19.65■□□□□ 0.74
NKX3-1-202ENST00000523261 ZNF831Q5JPB2 1677 aa19.65■□□□□ 0.74
NKX3-1-202ENST00000523261 COL5A3P25940 1745 aaPredicted RBP19.65■□□□□ 0.74
NKX3-1-202ENST00000523261 CREBZFQ9NS37 354 aa19.64■□□□□ 0.73
NKX3-1-202ENST00000523261 NCAPD2Q15021 1401 aa19.64■□□□□ 0.73
NKX3-1-202ENST00000523261 FLT4P35916 1363 aa19.63■□□□□ 0.73
NKX3-1-202ENST00000523261 POTECB2RU33 542 aa19.63■□□□□ 0.73
NKX3-1-202ENST00000523261 RPS6KA4O75676 772 aa19.63■□□□□ 0.73
NKX3-1-202ENST00000523261 SPG7Q9UQ90 795 aa19.63■□□□□ 0.73
NKX3-1-202ENST00000523261 CNTNAP4Q9C0A0 1308 aa19.62■□□□□ 0.73
NKX3-1-202ENST00000523261 LMNB1P20700 586 aa19.62■□□□□ 0.73
NKX3-1-202ENST00000523261 DDR1Q08345 913 aa19.62■□□□□ 0.73
NKX3-1-202ENST00000523261 TIAM2Q8IVF5 1701 aa19.62■□□□□ 0.73
NKX3-1-202ENST00000523261 MYH14Q7Z406 1995 aaKnown RBP19.61■□□□□ 0.73
NKX3-1-202ENST00000523261 KIF24Q5T7B8 1368 aa19.61■□□□□ 0.73
NKX3-1-202ENST00000523261 FYB1O15117 783 aa19.61■□□□□ 0.73
NKX3-1-202ENST00000523261 CTCFP49711 727 aaPredicted RBP19.6■□□□□ 0.73
NKX3-1-202ENST00000523261 GGNBP2Q9H3C7 697 aa19.6■□□□□ 0.73
NKX3-1-202ENST00000523261 FKBP8Q14318 412 aa19.59■□□□□ 0.73
NKX3-1-202ENST00000523261 CARD11Q9BXL7 1154 aa19.59■□□□□ 0.73
NKX3-1-202ENST00000523261 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.59■□□□□ 0.73
NKX3-1-202ENST00000523261 CNTNAP1P78357 1384 aa19.58■□□□□ 0.73
NKX3-1-202ENST00000523261 PHKG2P15735 406 aa19.58■□□□□ 0.72
NKX3-1-202ENST00000523261 ABHD8Q96I13 439 aa19.58■□□□□ 0.72
NKX3-1-202ENST00000523261 RBM42Q9BTD8 480 aaKnown RBP19.58■□□□□ 0.72
NKX3-1-202ENST00000523261 SRP68Q9UHB9 627 aaKnown RBP19.58■□□□□ 0.72
NKX3-1-202ENST00000523261 CCDC88AQ3V6T2 1871 aa19.58■□□□□ 0.72
NKX3-1-202ENST00000523261 IFNL2Q8IZJ0 200 aa19.57■□□□□ 0.72
NKX3-1-202ENST00000523261 SIN3AQ96ST3 1273 aa19.57■□□□□ 0.72
NKX3-1-202ENST00000523261 TONSLQ96HA7 1378 aa19.57■□□□□ 0.72
NKX3-1-202ENST00000523261 USP42Q9H9J4 1324 aaKnown RBP19.56■□□□□ 0.72
NKX3-1-202ENST00000523261 AIDAQ96BJ3 306 aa19.56■□□□□ 0.72
NKX3-1-202ENST00000523261 POLRMTO00411 1230 aaKnown RBP19.55■□□□□ 0.72
NKX3-1-202ENST00000523261 CHADLQ6NUI6 762 aa19.55■□□□□ 0.72
NKX3-1-202ENST00000523261 LBX1P52954 281 aa19.54■□□□□ 0.72
NKX3-1-202ENST00000523261 NFKBIEO00221 500 aa19.53■□□□□ 0.72
NKX3-1-202ENST00000523261 TM4SF1P30408 202 aa19.53■□□□□ 0.72
NKX3-1-202ENST00000523261 WBP1LQ9NX94 342 aa19.53■□□□□ 0.72
NKX3-1-202ENST00000523261 EMILIN1Q9Y6C2 1016 aa19.53■□□□□ 0.72
NKX3-1-202ENST00000523261 DLEC1Q9Y238 1755 aa19.52■□□□□ 0.72
NKX3-1-202ENST00000523261 POTEIP0CG38 1075 aa19.52■□□□□ 0.72
NKX3-1-202ENST00000523261 POTEJP0CG39 1038 aa19.52■□□□□ 0.72
NKX3-1-202ENST00000523261 MLLT1Q03111 559 aaPredicted RBP19.52■□□□□ 0.72
NKX3-1-202ENST00000523261 DPY19L2Q6NUT2 758 aa19.52■□□□□ 0.72
NKX3-1-202ENST00000523261 VIRMAQ69YN4 1812 aaKnown RBP19.51■□□□□ 0.71
NKX3-1-202ENST00000523261 VEGFBP49765 207 aa19.51■□□□□ 0.71
NKX3-1-202ENST00000523261 TESK2Q96S53 571 aa19.51■□□□□ 0.71
NKX3-1-202ENST00000523261 ADAMTS7Q9UKP4 1686 aa19.5■□□□□ 0.71
NKX3-1-202ENST00000523261 ERVV-2B6SEH9 535 aa19.5■□□□□ 0.71
NKX3-1-202ENST00000523261 CRKLP46109 303 aaKnown RBP19.5■□□□□ 0.71
NKX3-1-202ENST00000523261 RGS19P49795 217 aa19.5■□□□□ 0.71
NKX3-1-202ENST00000523261 EYA1Q99502 592 aa19.5■□□□□ 0.71
NKX3-1-202ENST00000523261 KIF20BQ96Q89 1820 aa19.5■□□□□ 0.71
NKX3-1-202ENST00000523261 PASKQ96RG2 1323 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms