RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 SCN11AQ9UI33 1791 aa21.92■■□□□ 1.1
CLN8-206ENST00000523237 ZNF831Q5JPB2 1677 aa21.91■■□□□ 1.1
CLN8-206ENST00000523237 MAP3K5Q99683 1374 aa21.91■■□□□ 1.1
CLN8-206ENST00000523237 HMOX1P09601 288 aa21.91■■□□□ 1.1
CLN8-206ENST00000523237 CABP4P57796 275 aa21.91■■□□□ 1.1
CLN8-206ENST00000523237 VIRMAQ69YN4 1812 aaKnown RBP21.9■■□□□ 1.1
CLN8-206ENST00000523237 ATP6V1AP38606 617 aa21.9■■□□□ 1.1
CLN8-206ENST00000523237 COL3A1P02461 1466 aaPredicted RBP21.9■■□□□ 1.1
CLN8-206ENST00000523237 AKAP4Q5JQC9 854 aa21.89■■□□□ 1.09
CLN8-206ENST00000523237 LINC00116Q8NCU8 138 aa21.89■■□□□ 1.09
CLN8-206ENST00000523237 ITPK1Q13572 414 aa21.87■■□□□ 1.09
CLN8-206ENST00000523237 SSFA2P28290 1259 aa21.86■■□□□ 1.09
CLN8-206ENST00000523237 RBM42Q9BTD8 480 aaKnown RBP21.86■■□□□ 1.09
CLN8-206ENST00000523237 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.85■■□□□ 1.09
CLN8-206ENST00000523237 U2SURPO15042 1029 aaKnown RBP21.85■■□□□ 1.09
CLN8-206ENST00000523237 PHF14O94880 888 aa21.85■■□□□ 1.09
CLN8-206ENST00000523237 MSL1Q68DK7 614 aa21.85■■□□□ 1.09
CLN8-206ENST00000523237 KLHL34Q8N239 644 aa21.85■■□□□ 1.09
CLN8-206ENST00000523237 NFATC2IPQ8NCF5 419 aa21.85■■□□□ 1.09
CLN8-206ENST00000523237 CFAP53Q96M91 514 aa21.85■■□□□ 1.09
CLN8-206ENST00000523237 COL5A3P25940 1745 aaPredicted RBP21.85■■□□□ 1.09
CLN8-206ENST00000523237 AMIGO3Q86WK7 504 aa21.84■■□□□ 1.09
CLN8-206ENST00000523237 GNPATO15228 680 aa21.83■■□□□ 1.09
CLN8-206ENST00000523237 MTHFSDQ2M296 383 aaKnown RBP21.82■■□□□ 1.08
CLN8-206ENST00000523237 SLC4A9Q96Q91 983 aa21.82■■□□□ 1.08
CLN8-206ENST00000523237 ADAMTS7Q9UKP4 1686 aa21.82■■□□□ 1.08
CLN8-206ENST00000523237 SMIM5Q71RC9 77 aa21.81■■□□□ 1.08
CLN8-206ENST00000523237 SLC52A2Q9HAB3 445 aa21.81■■□□□ 1.08
CLN8-206ENST00000523237 MRC1P22897 1456 aa21.81■■□□□ 1.08
CLN8-206ENST00000523237 RNMTO43148 476 aaKnown RBP21.8■■□□□ 1.08
CLN8-206ENST00000523237 PTCD1O75127 700 aaKnown RBP21.8■■□□□ 1.08
CLN8-206ENST00000523237 LGR6Q9HBX8 967 aa21.8■■□□□ 1.08
CLN8-206ENST00000523237 YY1P25490 414 aa21.79■■□□□ 1.08
CLN8-206ENST00000523237 PPP2R1AP30153 589 aa21.79■■□□□ 1.08
CLN8-206ENST00000523237 RC3H1Q5TC82 1133 aaKnown RBP21.79■■□□□ 1.08
CLN8-206ENST00000523237 RTCBQ9Y3I0 505 aaKnown RBP21.79■■□□□ 1.08
CLN8-206ENST00000523237 CICQ96RK0 1608 aaPredicted RBP21.79■■□□□ 1.08
CLN8-206ENST00000523237 CNTNAP4Q9C0A0 1308 aa21.79■■□□□ 1.08
CLN8-206ENST00000523237 NUDCQ9Y266 331 aa21.78■■□□□ 1.08
CLN8-206ENST00000523237 TJP1Q07157 1748 aa21.77■■□□□ 1.08
CLN8-206ENST00000523237 MYH14Q7Z406 1995 aaKnown RBP21.77■■□□□ 1.08
CLN8-206ENST00000523237 TRAPPC3LQ5T215 181 aa21.76■■□□□ 1.07
CLN8-206ENST00000523237 GAS2L2Q8NHY3 880 aa21.76■■□□□ 1.07
CLN8-206ENST00000523237 CHD4Q14839 1912 aa21.76■■□□□ 1.07
CLN8-206ENST00000523237 ADRA2BP18089 450 aa21.75■■□□□ 1.07
CLN8-206ENST00000523237 NLGN2Q8NFZ4 835 aa21.75■■□□□ 1.07
CLN8-206ENST00000523237 RPS6KA4O75676 772 aa21.74■■□□□ 1.07
CLN8-206ENST00000523237 GPR162Q16538 588 aa21.74■■□□□ 1.07
CLN8-206ENST00000523237 CD2APQ9Y5K6 639 aa21.73■■□□□ 1.07
CLN8-206ENST00000523237 C4AP0C0L4 1744 aa21.72■■□□□ 1.07
CLN8-206ENST00000523237 GNAT3A8MTJ3 354 aa21.72■■□□□ 1.07
CLN8-206ENST00000523237 PRKAR2BP31323 418 aa21.72■■□□□ 1.07
CLN8-206ENST00000523237 CRKLP46109 303 aaKnown RBP21.72■■□□□ 1.07
CLN8-206ENST00000523237 RSPH6AQ9H0K4 717 aa21.72■■□□□ 1.07
CLN8-206ENST00000523237 UBR2Q8IWV8 1755 aa21.71■■□□□ 1.07
CLN8-206ENST00000523237 U2AF1L5P0DN76 240 aaPredicted RBP21.71■■□□□ 1.07
CLN8-206ENST00000523237 U2AF1Q01081 240 aaKnown RBP eCLIP21.71■■□□□ 1.07
CLN8-206ENST00000523237 SLC39A6Q13433 755 aa21.71■■□□□ 1.07
CLN8-206ENST00000523237 PELP1Q8IZL8 1130 aaKnown RBP21.71■■□□□ 1.07
CLN8-206ENST00000523237 ARHGEF1Q92888 912 aaKnown RBP21.71■■□□□ 1.07
CLN8-206ENST00000523237 KCPQ6ZWJ8 1503 aa21.7■■□□□ 1.07
CLN8-206ENST00000523237 SIPA1L3O60292 1781 aaPredicted RBP21.7■■□□□ 1.06
CLN8-206ENST00000523237 RFC4P35249 363 aa21.7■■□□□ 1.06
CLN8-206ENST00000523237 TEFQ10587 303 aa21.69■■□□□ 1.06
CLN8-206ENST00000523237 NLGN1Q8N2Q7 840 aa21.69■■□□□ 1.06
CLN8-206ENST00000523237 PHACTR3Q96KR7 559 aa21.69■■□□□ 1.06
CLN8-206ENST00000523237 FCHSD2O94868 740 aa21.68■■□□□ 1.06
CLN8-206ENST00000523237 DNAJC10Q8IXB1 793 aa21.68■■□□□ 1.06
CLN8-206ENST00000523237 IL17REQ8NFR9 667 aa21.68■■□□□ 1.06
CLN8-206ENST00000523237 MMP10P09238 476 aa21.67■■□□□ 1.06
CLN8-206ENST00000523237 TTC5Q8N0Z6 440 aa21.67■■□□□ 1.06
CLN8-206ENST00000523237 VSIG10Q8N0Z9 540 aa21.66■■□□□ 1.06
CLN8-206ENST00000523237 GYS1P13807 737 aa21.65■■□□□ 1.06
CLN8-206ENST00000523237 INTS5Q6P9B9 1019 aaKnown RBP21.65■■□□□ 1.06
CLN8-206ENST00000523237 CCDC87Q9NVE4 849 aa21.65■■□□□ 1.06
CLN8-206ENST00000523237 CEMIPQ8WUJ3 1361 aa21.64■■□□□ 1.06
CLN8-206ENST00000523237 CYP19A1P11511 503 aaPredicted RBP21.64■■□□□ 1.05
CLN8-206ENST00000523237 KIF13BQ9NQT8 1826 aa21.64■■□□□ 1.05
CLN8-206ENST00000523237 GRIN3BO60391 1043 aa21.63■■□□□ 1.05
CLN8-206ENST00000523237 USP42Q9H9J4 1324 aaKnown RBP21.62■■□□□ 1.05
CLN8-206ENST00000523237 YBX3P16989 372 aaKnown RBP eCLIP21.62■■□□□ 1.05
CLN8-206ENST00000523237 ZNF790Q6PG37 636 aa21.62■■□□□ 1.05
CLN8-206ENST00000523237 RTF1Q92541 710 aaKnown RBP21.61■■□□□ 1.05
CLN8-206ENST00000523237 SOS1Q07889 1333 aaPredicted RBP21.6■■□□□ 1.05
CLN8-206ENST00000523237 UTRNP46939 3433 aa21.6■■□□□ 1.05
CLN8-206ENST00000523237 NEFMP07197 916 aa21.6■■□□□ 1.05
CLN8-206ENST00000523237 SRP68Q9UHB9 627 aaKnown RBP21.6■■□□□ 1.05
CLN8-206ENST00000523237 PARP3Q9Y6F1 533 aa21.6■■□□□ 1.05
CLN8-206ENST00000523237 STARD3NLO95772 234 aa21.59■■□□□ 1.05
CLN8-206ENST00000523237 DDX10Q13206 875 aaKnown RBP21.59■■□□□ 1.05
CLN8-206ENST00000523237 RALBP1Q15311 655 aa21.59■■□□□ 1.05
CLN8-206ENST00000523237 ZNF496Q96IT1 587 aaPredicted RBP21.59■■□□□ 1.05
CLN8-206ENST00000523237 ZBTB1Q9Y2K1 713 aa21.59■■□□□ 1.05
CLN8-206ENST00000523237 HEG1Q9ULI3 1381 aa21.59■■□□□ 1.05
CLN8-206ENST00000523237 BTBD11A6QL63 1104 aa21.58■■□□□ 1.05
CLN8-206ENST00000523237 ZPR1O75312 459 aa21.58■■□□□ 1.05
CLN8-206ENST00000523237 TEX13AQ9BXU3 409 aaPredicted RBP21.58■■□□□ 1.05
CLN8-206ENST00000523237 DLG5Q8TDM6 1919 aa21.58■■□□□ 1.04
CLN8-206ENST00000523237 COL15A1P39059 1388 aa21.58■■□□□ 1.04
CLN8-206ENST00000523237 C10orf71Q711Q0 1435 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms