RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 GDF10P55107 478 aa8.88□□□□□ -0.99
CLK4-213ENST00000523013 TLR1Q15399 786 aa8.88□□□□□ -0.99
CLK4-213ENST00000523013 GNASQ5JWF2 1037 aa8.88□□□□□ -0.99
CLK4-213ENST00000523013 TMEM214Q6NUQ4 689 aaKnown RBP8.88□□□□□ -0.99
CLK4-213ENST00000523013 PPARGC1BQ86YN6 1023 aaKnown RBP8.88□□□□□ -0.99
CLK4-213ENST00000523013 A0A1B0GTH6 734 aa8.87□□□□□ -0.99
CLK4-213ENST00000523013 POM121CA8CG34 1229 aa8.87□□□□□ -0.99
CLK4-213ENST00000523013 RAD21O60216 631 aa8.87□□□□□ -0.99
CLK4-213ENST00000523013 ARHGEF15O94989 841 aa8.87□□□□□ -0.99
CLK4-213ENST00000523013 UBTFP17480 764 aaKnown RBP8.87□□□□□ -0.99
CLK4-213ENST00000523013 TMEM132AQ24JP5 1023 aa8.87□□□□□ -0.99
CLK4-213ENST00000523013 FOXR1Q6PIV2 292 aa8.87□□□□□ -0.99
CLK4-213ENST00000523013 SVOPQ8N4V2 548 aa8.87□□□□□ -0.99
CLK4-213ENST00000523013 ADAMTS19Q8TE59 1207 aa8.87□□□□□ -0.99
CLK4-213ENST00000523013 RHBDD1Q8TEB9 315 aa8.87□□□□□ -0.99
CLK4-213ENST00000523013 NUCKS1Q9H1E3 243 aaKnown RBP8.87□□□□□ -0.99
CLK4-213ENST00000523013 GPAMQ9HCL2 828 aa8.87□□□□□ -0.99
CLK4-213ENST00000523013 MBIPQ9NS73 344 aa8.87□□□□□ -0.99
CLK4-213ENST00000523013 ADAMTS8Q9UP79 889 aa8.87□□□□□ -0.99
CLK4-213ENST00000523013 PCDHGA11Q9Y5H2 935 aa8.87□□□□□ -0.99
CLK4-213ENST00000523013 TMEM229AB2RXF0 380 aa8.86□□□□□ -0.99
CLK4-213ENST00000523013 SKIP12755 728 aa8.86□□□□□ -0.99
CLK4-213ENST00000523013 LYPD4Q6UWN0 246 aa8.86□□□□□ -0.99
CLK4-213ENST00000523013 WWC1Q8IX03 1113 aa8.86□□□□□ -0.99
CLK4-213ENST00000523013 GTF2E1P29083 439 aaPredicted RBP8.85□□□□□ -0.99
CLK4-213ENST00000523013 GSK3AP49840 483 aa8.85□□□□□ -0.99
CLK4-213ENST00000523013 NFATC2IPQ8NCF5 419 aa8.85□□□□□ -0.99
CLK4-213ENST00000523013 MSX1P28360 303 aa8.84□□□□□ -0.99
CLK4-213ENST00000523013 UBAP2LQ14157 1087 aaKnown RBP8.84□□□□□ -0.99
CLK4-213ENST00000523013 ZNF295-AS1Q8N0V1 137 aa8.84□□□□□ -0.99
CLK4-213ENST00000523013 TRERF1Q96PN7 1200 aa8.84□□□□□ -0.99
CLK4-213ENST00000523013 IGF1RP08069 1367 aa8.84□□□□□ -0.99
CLK4-213ENST00000523013 CELA2BP08218 269 aaPredicted RBP8.83□□□□□ -1
CLK4-213ENST00000523013 SMTNP53814 917 aa8.83□□□□□ -1
CLK4-213ENST00000523013 NCOA4Q13772 614 aa8.83□□□□□ -1
CLK4-213ENST00000523013 EML3Q32P44 896 aa8.83□□□□□ -1
CLK4-213ENST00000523013 SLC4A9Q96Q91 983 aa8.83□□□□□ -1
CLK4-213ENST00000523013 LZTS3O60299 673 aaPredicted RBP8.82□□□□□ -1
CLK4-213ENST00000523013 KCNMA1Q12791 1236 aa8.82□□□□□ -1
CLK4-213ENST00000523013 RUBCNLQ9H714 662 aa8.82□□□□□ -1
CLK4-213ENST00000523013 SERTAD1Q9UHV2 236 aa8.82□□□□□ -1
CLK4-213ENST00000523013 USP17L5A8MUK1 530 aa8.81□□□□□ -1
CLK4-213ENST00000523013 PLA2G4AP47712 749 aa8.81□□□□□ -1
CLK4-213ENST00000523013 LBRQ14739 615 aaKnown RBP8.81□□□□□ -1
CLK4-213ENST00000523013 MTFR1Q15390 333 aa8.81□□□□□ -1
CLK4-213ENST00000523013 UCN2Q96RP3 112 aa8.81□□□□□ -1
CLK4-213ENST00000523013 CFHR5Q9BXR6 569 aa8.81□□□□□ -1
CLK4-213ENST00000523013 IQSEC3Q9UPP2 1182 aaPredicted RBP8.81□□□□□ -1
CLK4-213ENST00000523013 NOD1Q9Y239 953 aa8.81□□□□□ -1
CLK4-213ENST00000523013 USP3Q9Y6I4 520 aa8.81□□□□□ -1
CLK4-213ENST00000523013 MX2P20592 715 aa8.8□□□□□ -1
CLK4-213ENST00000523013 GTF2IP78347 998 aa8.8□□□□□ -1
CLK4-213ENST00000523013 HDGFL1Q5TGJ6 251 aa8.8□□□□□ -1
CLK4-213ENST00000523013 DEPDC4Q8N2C3 294 aa8.8□□□□□ -1
CLK4-213ENST00000523013 CLUAP1Q96AJ1 413 aa8.8□□□□□ -1
CLK4-213ENST00000523013 ACDQ96AP0 544 aa8.8□□□□□ -1
CLK4-213ENST00000523013 NIFKQ9BYG3 293 aaKnown RBP8.8□□□□□ -1
CLK4-213ENST00000523013 CRISPLD1Q9H336 500 aa8.8□□□□□ -1
CLK4-213ENST00000523013 A6NJY4 79 aa8.79□□□□□ -1
CLK4-213ENST00000523013 ATP4AP20648 1035 aa8.79□□□□□ -1
CLK4-213ENST00000523013 TBC1D9Q6ZT07 1266 aa8.79□□□□□ -1
CLK4-213ENST00000523013 FNBP4Q8N3X1 1017 aaPredicted RBP8.79□□□□□ -1
CLK4-213ENST00000523013 CDK2AP1O14519 115 aa8.78□□□□□ -1
CLK4-213ENST00000523013 CSB-PGBD3P0DP91 1061 aa8.78□□□□□ -1
CLK4-213ENST00000523013 PGBD3Q8N328 593 aa8.78□□□□□ -1
CLK4-213ENST00000523013 NDFIP2Q9NV92 336 aa8.78□□□□□ -1
CLK4-213ENST00000523013 MAP3K10Q02779 954 aa8.77□□□□□ -1.01
CLK4-213ENST00000523013 EFHC2Q5JST6 749 aa8.77□□□□□ -1.01
CLK4-213ENST00000523013 PLEKHM2Q8IWE5 1019 aa8.77□□□□□ -1.01
CLK4-213ENST00000523013 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.77□□□□□ -1.01
CLK4-213ENST00000523013 DNAAF2Q9NVR5 837 aaKnown RBP8.77□□□□□ -1.01
CLK4-213ENST00000523013 ZNF358Q9NW07 568 aa8.77□□□□□ -1.01
CLK4-213ENST00000523013 USP17L3A6NCW0 530 aa8.76□□□□□ -1.01
CLK4-213ENST00000523013 USP17L4A6NCW7 530 aa8.76□□□□□ -1.01
CLK4-213ENST00000523013 BCRP11274 1271 aa8.76□□□□□ -1.01
CLK4-213ENST00000523013 USP17L2Q6R6M4 530 aa8.76□□□□□ -1.01
CLK4-213ENST00000523013 USP17L1Q7RTZ2 530 aa8.76□□□□□ -1.01
CLK4-213ENST00000523013 PHF24Q9UPV7 400 aa8.76□□□□□ -1.01
CLK4-213ENST00000523013 RNF225M0QZC1 329 aaPredicted RBP8.75□□□□□ -1.01
CLK4-213ENST00000523013 BACH1O14867 736 aa8.75□□□□□ -1.01
CLK4-213ENST00000523013 ZBTB7BO15156 539 aaPredicted RBP8.75□□□□□ -1.01
CLK4-213ENST00000523013 ATP9BO43861 1147 aa8.75□□□□□ -1.01
CLK4-213ENST00000523013 BNIP3LO60238 219 aa8.75□□□□□ -1.01
CLK4-213ENST00000523013 EPHA4P54764 986 aa8.75□□□□□ -1.01
CLK4-213ENST00000523013 RASSF7Q02833 373 aa8.75□□□□□ -1.01
CLK4-213ENST00000523013 PSME1Q06323 249 aa8.75□□□□□ -1.01
CLK4-213ENST00000523013 PROSER2Q86WR7 435 aaPredicted RBP8.75□□□□□ -1.01
CLK4-213ENST00000523013 C1orf216Q8TAB5 229 aa8.75□□□□□ -1.01
CLK4-213ENST00000523013 AIDAQ96BJ3 306 aa8.75□□□□□ -1.01
CLK4-213ENST00000523013 ABHD17AQ96GS6 310 aa8.75□□□□□ -1.01
CLK4-213ENST00000523013 NSFL1CQ9UNZ2 370 aaKnown RBP8.75□□□□□ -1.01
CLK4-213ENST00000523013 KIAA1024Q9UPX6 916 aa8.75□□□□□ -1.01
CLK4-213ENST00000523013 MAP2K3P46734 347 aa8.74□□□□□ -1.01
CLK4-213ENST00000523013 MARSP56192 900 aaKnown RBP8.74□□□□□ -1.01
CLK4-213ENST00000523013 CLDN10P78369 228 aa8.74□□□□□ -1.01
CLK4-213ENST00000523013 CABP1Q9NZU7 370 aa8.74□□□□□ -1.01
CLK4-213ENST00000523013 SCHIP1Q9P0W5 487 aaPredicted RBP8.74□□□□□ -1.01
CLK4-213ENST00000523013 ATXN7L1Q9ULK2 861 aaPredicted RBP8.74□□□□□ -1.01
CLK4-213ENST00000523013 C2CD2LO14523 706 aa8.73□□□□□ -1.01
CLK4-213ENST00000523013 FOXK2Q01167 660 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms