RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 COL3A1P02461 1466 aaPredicted RBP29.37■■■□□ 2.29
HOXA3-205ENST00000522456 IFNL2Q8IZJ0 200 aa29.37■■■□□ 2.29
HOXA3-205ENST00000522456 RALBP1Q15311 655 aa29.36■■■□□ 2.29
HOXA3-205ENST00000522456 AMOTQ4VCS5 1084 aa29.36■■■□□ 2.29
HOXA3-205ENST00000522456 PIGBQ92521 554 aa29.36■■■□□ 2.29
HOXA3-205ENST00000522456 KDRP35968 1356 aa29.36■■■□□ 2.29
HOXA3-205ENST00000522456 AK7Q96M32 723 aa29.35■■■□□ 2.29
HOXA3-205ENST00000522456 NUDCQ9Y266 331 aa29.34■■■□□ 2.29
HOXA3-205ENST00000522456 PHKG2P15735 406 aa29.33■■■□□ 2.29
HOXA3-205ENST00000522456 YBX3P16989 372 aaKnown RBP eCLIP29.31■■■□□ 2.28
HOXA3-205ENST00000522456 ZNF530Q6P9A1 599 aaPredicted RBP29.31■■■□□ 2.28
HOXA3-205ENST00000522456 UBR3Q6ZT12 1888 aa29.3■■■□□ 2.28
HOXA3-205ENST00000522456 HSP90AB1P08238 724 aaKnown RBP29.3■■■□□ 2.28
HOXA3-205ENST00000522456 GRIN3BO60391 1043 aa29.29■■■□□ 2.28
HOXA3-205ENST00000522456 AMIGO3Q86WK7 504 aa29.29■■■□□ 2.28
HOXA3-205ENST00000522456 TMOD3Q9NYL9 352 aa29.29■■■□□ 2.28
HOXA3-205ENST00000522456 LOC102724428A0A0B4J2F2 783 aa29.28■■■□□ 2.28
HOXA3-205ENST00000522456 PHF14O94880 888 aa29.28■■■□□ 2.28
HOXA3-205ENST00000522456 SIK1P57059 783 aa29.28■■■□□ 2.28
HOXA3-205ENST00000522456 CD2APQ9Y5K6 639 aa29.28■■■□□ 2.28
HOXA3-205ENST00000522456 C1QTNF8P60827 252 aa29.27■■■□□ 2.28
HOXA3-205ENST00000522456 C1orf141Q5JVX7 400 aa29.27■■■□□ 2.28
HOXA3-205ENST00000522456 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.26■■■□□ 2.27
HOXA3-205ENST00000522456 U2AF1L5P0DN76 240 aaPredicted RBP29.26■■■□□ 2.27
HOXA3-205ENST00000522456 U2AF1Q01081 240 aaKnown RBP eCLIP29.26■■■□□ 2.27
HOXA3-205ENST00000522456 LINC00116Q8NCU8 138 aa29.25■■■□□ 2.27
HOXA3-205ENST00000522456 SSFA2P28290 1259 aa29.24■■■□□ 2.27
HOXA3-205ENST00000522456 DCAF5Q96JK2 942 aa29.24■■■□□ 2.27
HOXA3-205ENST00000522456 ASAP1Q9ULH1 1129 aa29.24■■■□□ 2.27
HOXA3-205ENST00000522456 MYBBP1AQ9BQG0 1328 aaKnown RBP29.23■■■□□ 2.27
HOXA3-205ENST00000522456 SMIM5Q71RC9 77 aa29.23■■■□□ 2.27
HOXA3-205ENST00000522456 GIGYF1O75420 1035 aaPredicted RBP29.22■■■□□ 2.27
HOXA3-205ENST00000522456 SENP3-EIF4A1A0A087X0R7 540 aa29.21■■■□□ 2.27
HOXA3-205ENST00000522456 ERVV-2B6SEH9 535 aa29.21■■■□□ 2.27
HOXA3-205ENST00000522456 ITPK1Q13572 414 aa29.2■■■□□ 2.26
HOXA3-205ENST00000522456 MTHFSDQ2M296 383 aaKnown RBP29.2■■■□□ 2.26
HOXA3-205ENST00000522456 PRKRIP1Q9H875 184 aaPredicted RBP29.2■■■□□ 2.26
HOXA3-205ENST00000522456 PRKAR2BP31323 418 aa29.19■■■□□ 2.26
HOXA3-205ENST00000522456 ATP6V1AP38606 617 aa29.19■■■□□ 2.26
HOXA3-205ENST00000522456 AKAP4Q5JQC9 854 aa29.19■■■□□ 2.26
HOXA3-205ENST00000522456 ATG3Q9NT62 314 aa29.19■■■□□ 2.26
HOXA3-205ENST00000522456 GNPATO15228 680 aa29.18■■■□□ 2.26
HOXA3-205ENST00000522456 RSPH6AQ9H0K4 717 aa29.18■■■□□ 2.26
HOXA3-205ENST00000522456 KDM6AO15550 1401 aaPredicted RBP29.18■■■□□ 2.26
HOXA3-205ENST00000522456 FCHSD2O94868 740 aa29.17■■■□□ 2.26
HOXA3-205ENST00000522456 CABP4P57796 275 aa29.14■■■□□ 2.26
HOXA3-205ENST00000522456 PHACTR3Q96KR7 559 aa29.14■■■□□ 2.26
HOXA3-205ENST00000522456 GAS2L2Q8NHY3 880 aa29.13■■■□□ 2.25
HOXA3-205ENST00000522456 ZNF831Q5JPB2 1677 aa29.12■■■□□ 2.25
HOXA3-205ENST00000522456 ATP10DQ9P241 1426 aa29.11■■■□□ 2.25
HOXA3-205ENST00000522456 SCN11AQ9UI33 1791 aa29.11■■■□□ 2.25
HOXA3-205ENST00000522456 LGR6Q9HBX8 967 aa29.1■■■□□ 2.25
HOXA3-205ENST00000522456 NFATC2IPQ8NCF5 419 aa29.09■■■□□ 2.25
HOXA3-205ENST00000522456 NEFMP07197 916 aa29.08■■■□□ 2.25
HOXA3-205ENST00000522456 RBM42Q9BTD8 480 aaKnown RBP29.08■■■□□ 2.25
HOXA3-205ENST00000522456 WWC3Q9ULE0 1092 aa29.08■■■□□ 2.25
HOXA3-205ENST00000522456 GNAT3A8MTJ3 354 aa29.07■■■□□ 2.24
HOXA3-205ENST00000522456 RNMTO43148 476 aaKnown RBP29.07■■■□□ 2.24
HOXA3-205ENST00000522456 COL5A3P25940 1745 aaPredicted RBP29.07■■■□□ 2.24
HOXA3-205ENST00000522456 SLC4A9Q96Q91 983 aa29.07■■■□□ 2.24
HOXA3-205ENST00000522456 RTCBQ9Y3I0 505 aaKnown RBP29.07■■■□□ 2.24
HOXA3-205ENST00000522456 ADCY9O60503 1353 aa29.06■■■□□ 2.24
HOXA3-205ENST00000522456 MMP10P09238 476 aa29.06■■■□□ 2.24
HOXA3-205ENST00000522456 PNNQ9H307 717 aaKnown RBP29.06■■■□□ 2.24
HOXA3-205ENST00000522456 MRC1P22897 1456 aa29.04■■■□□ 2.24
HOXA3-205ENST00000522456 ANP32CO43423 234 aa29.04■■■□□ 2.24
HOXA3-205ENST00000522456 TRAPPC3LQ5T215 181 aa29.04■■■□□ 2.24
HOXA3-205ENST00000522456 ADAMTS7Q9UKP4 1686 aa29.03■■■□□ 2.24
HOXA3-205ENST00000522456 CNTNAP4Q9C0A0 1308 aa29.03■■■□□ 2.24
HOXA3-205ENST00000522456 RC3H1Q5TC82 1133 aaKnown RBP29.03■■■□□ 2.24
HOXA3-205ENST00000522456 SLC52A2Q9HAB3 445 aa29.03■■■□□ 2.24
HOXA3-205ENST00000522456 CICQ96RK0 1608 aaPredicted RBP29.02■■■□□ 2.24
HOXA3-205ENST00000522456 ADRA2BP18089 450 aa29.02■■■□□ 2.24
HOXA3-205ENST00000522456 WDR43Q15061 677 aaKnown RBP eCLIP29.02■■■□□ 2.24
HOXA3-205ENST00000522456 KIF13BQ9NQT8 1826 aa29.01■■■□□ 2.24
HOXA3-205ENST00000522456 GPBP1L1Q9HC44 474 aaPredicted RBP29.01■■■□□ 2.23
HOXA3-205ENST00000522456 VIRMAQ69YN4 1812 aaKnown RBP29.01■■■□□ 2.23
HOXA3-205ENST00000522456 PXDNLA1KZ92 1463 aa29■■■□□ 2.23
HOXA3-205ENST00000522456 NLGN1Q8N2Q7 840 aa29■■■□□ 2.23
HOXA3-205ENST00000522456 IL17REQ8NFR9 667 aa29■■■□□ 2.23
HOXA3-205ENST00000522456 PLEKHF1Q96S99 279 aa29■■■□□ 2.23
HOXA3-205ENST00000522456 ARHGEF1Q92888 912 aaKnown RBP28.99■■■□□ 2.23
HOXA3-205ENST00000522456 MAPK8IP3Q9UPT6 1336 aa28.98■■■□□ 2.23
HOXA3-205ENST00000522456 KIAA1551Q9HCM1 1747 aa28.98■■■□□ 2.23
HOXA3-205ENST00000522456 RTF1Q92541 710 aaKnown RBP28.98■■■□□ 2.23
HOXA3-205ENST00000522456 C10orf71Q711Q0 1435 aa28.97■■■□□ 2.23
HOXA3-205ENST00000522456 RPS6KA4O75676 772 aa28.97■■■□□ 2.23
HOXA3-205ENST00000522456 RFC4P35249 363 aa28.97■■■□□ 2.23
HOXA3-205ENST00000522456 TEFQ10587 303 aa28.97■■■□□ 2.23
HOXA3-205ENST00000522456 ZNF526Q8TF50 670 aaPredicted RBP28.97■■■□□ 2.23
HOXA3-205ENST00000522456 C4AP0C0L4 1744 aa28.97■■■□□ 2.23
HOXA3-205ENST00000522456 PTCD1O75127 700 aaKnown RBP28.96■■■□□ 2.23
HOXA3-205ENST00000522456 GYS1P13807 737 aa28.95■■■□□ 2.22
HOXA3-205ENST00000522456 MYH14Q7Z406 1995 aaKnown RBP28.94■■■□□ 2.22
HOXA3-205ENST00000522456 N4BP2Q86UW6 1770 aaPredicted RBP28.94■■■□□ 2.22
HOXA3-205ENST00000522456 TGFB2P61812 414 aa28.94■■■□□ 2.22
HOXA3-205ENST00000522456 CCDC87Q9NVE4 849 aa28.93■■■□□ 2.22
HOXA3-205ENST00000522456 ADAMTS8Q9UP79 889 aa28.93■■■□□ 2.22
HOXA3-205ENST00000522456 TJP1Q07157 1748 aa28.92■■■□□ 2.22
HOXA3-205ENST00000522456 HTATSF1O43719 755 aaKnown RBP28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms