RNA–Protein interactions for RNA: ENST00000522328.1

SH2D4A-205, Transcript of SH2 domain containing 4A, humanhuman

TSL 2

Gene SH2D4A, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-205ENST00000522328 ZNF827Q17R98 1081 aa9.56□□□□□ -0.88
SH2D4A-205ENST00000522328 CDCA8Q53HL2 280 aa9.56□□□□□ -0.88
SH2D4A-205ENST00000522328 ZCRB1Q8TBF4 217 aaKnown RBP9.56□□□□□ -0.88
SH2D4A-205ENST00000522328 KCNV2Q8TDN2 545 aa9.56□□□□□ -0.88
SH2D4A-205ENST00000522328 LTV1Q96GA3 475 aaPredicted RBP9.56□□□□□ -0.88
SH2D4A-205ENST00000522328 LRRC4BQ9NT99 713 aa9.56□□□□□ -0.88
SH2D4A-205ENST00000522328 QSER1Q2KHR3 1735 aa9.56□□□□□ -0.88
SH2D4A-205ENST00000522328 WDR70Q9NW82 654 aa9.55□□□□□ -0.88
SH2D4A-205ENST00000522328 USP47Q96K76 1375 aa9.54□□□□□ -0.88
SH2D4A-205ENST00000522328 POLD1P28340 1107 aa9.54□□□□□ -0.88
SH2D4A-205ENST00000522328 PRIM1P49642 420 aaKnown RBP9.54□□□□□ -0.88
SH2D4A-205ENST00000522328 RAPGEF4Q8WZA2 1011 aa9.54□□□□□ -0.88
SH2D4A-205ENST00000522328 SYTL4Q96C24 671 aaPredicted RBP9.54□□□□□ -0.88
SH2D4A-205ENST00000522328 MEGF6O75095 1541 aa9.54□□□□□ -0.88
SH2D4A-205ENST00000522328 DOT1LQ8TEK3 1739 aa9.53□□□□□ -0.88
SH2D4A-205ENST00000522328 NSD2O96028 1365 aa9.53□□□□□ -0.88
SH2D4A-205ENST00000522328 GOLGB1Q14789 3259 aaKnown RBP9.53□□□□□ -0.88
SH2D4A-205ENST00000522328 FYB1O15117 783 aa9.53□□□□□ -0.88
SH2D4A-205ENST00000522328 TFCP2L1Q9NZI6 479 aa9.53□□□□□ -0.88
SH2D4A-205ENST00000522328 LY75O60449 1722 aa9.53□□□□□ -0.88
SH2D4A-205ENST00000522328 PNPLA7Q6ZV29 1317 aa9.53□□□□□ -0.88
SH2D4A-205ENST00000522328 KAT6BQ8WYB5 2073 aa9.52□□□□□ -0.88
SH2D4A-205ENST00000522328 INSRP06213 1382 aa9.52□□□□□ -0.88
SH2D4A-205ENST00000522328 FLT4P35916 1363 aa9.52□□□□□ -0.88
SH2D4A-205ENST00000522328 COL24A1Q17RW2 1714 aa9.52□□□□□ -0.89
SH2D4A-205ENST00000522328 NBPF6Q5VWK0 638 aa9.52□□□□□ -0.89
SH2D4A-205ENST00000522328 NBPF4Q96M43 638 aa9.52□□□□□ -0.89
SH2D4A-205ENST00000522328 GGNBP2Q9H3C7 697 aa9.52□□□□□ -0.89
SH2D4A-205ENST00000522328 CCNL1Q9UK58 526 aaPredicted RBP9.52□□□□□ -0.89
SH2D4A-205ENST00000522328 PCDH11XQ9BZA7 1347 aa9.52□□□□□ -0.89
SH2D4A-205ENST00000522328 PCDH11YQ9BZA8 1340 aa9.52□□□□□ -0.89
SH2D4A-205ENST00000522328 SHANK3Q9BYB0 1731 aa9.51□□□□□ -0.89
SH2D4A-205ENST00000522328 CD44P16070 742 aaKnown RBP9.51□□□□□ -0.89
SH2D4A-205ENST00000522328 TATP17735 454 aaPredicted RBP9.51□□□□□ -0.89
SH2D4A-205ENST00000522328 RRS1Q15050 365 aaKnown RBP9.51□□□□□ -0.89
SH2D4A-205ENST00000522328 ZNF784Q8NCA9 323 aaPredicted RBP9.51□□□□□ -0.89
SH2D4A-205ENST00000522328 PHF12Q96QT6 1004 aa9.51□□□□□ -0.89
SH2D4A-205ENST00000522328 FBLN1P23142 703 aa9.5□□□□□ -0.89
SH2D4A-205ENST00000522328 TIMELESSQ9UNS1 1208 aa9.5□□□□□ -0.89
SH2D4A-205ENST00000522328 CHD4Q14839 1912 aa9.5□□□□□ -0.89
SH2D4A-205ENST00000522328 RGPD2P0DJD1 1756 aa9.5□□□□□ -0.89
SH2D4A-205ENST00000522328 KIF20BQ96Q89 1820 aa9.49□□□□□ -0.89
SH2D4A-205ENST00000522328 TRIM26Q12899 539 aaPredicted RBP9.49□□□□□ -0.89
SH2D4A-205ENST00000522328 GPR162Q16538 588 aa9.49□□□□□ -0.89
SH2D4A-205ENST00000522328 FLAD1Q8NFF5 587 aa9.49□□□□□ -0.89
SH2D4A-205ENST00000522328 TUBGCP6Q96RT7 1819 aa9.48□□□□□ -0.89
SH2D4A-205ENST00000522328 HSP90AB2PQ58FF8 381 aa9.48□□□□□ -0.89
SH2D4A-205ENST00000522328 USHBP1Q8N6Y0 703 aa9.48□□□□□ -0.89
SH2D4A-205ENST00000522328 SMARCC1Q92922 1105 aaPredicted RBP9.48□□□□□ -0.89
SH2D4A-205ENST00000522328 NCAPD2Q15021 1401 aa9.48□□□□□ -0.89
SH2D4A-205ENST00000522328 NSD3Q9BZ95 1437 aa9.48□□□□□ -0.89
SH2D4A-205ENST00000522328 KCNQ4P56696 695 aa9.47□□□□□ -0.89
SH2D4A-205ENST00000522328 PALLDQ8WX93 1383 aa9.47□□□□□ -0.89
SH2D4A-205ENST00000522328 PLEKHG2Q9H7P9 1386 aa9.47□□□□□ -0.89
SH2D4A-205ENST00000522328 PKD1L3Q7Z443 1732 aa9.46□□□□□ -0.89
SH2D4A-205ENST00000522328 GRIN3BO60391 1043 aa9.46□□□□□ -0.9
SH2D4A-205ENST00000522328 COL23A1Q86Y22 540 aaPredicted RBP9.46□□□□□ -0.9
SH2D4A-205ENST00000522328 MS4A4AQ96JQ5 239 aa9.46□□□□□ -0.9
SH2D4A-205ENST00000522328 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.46□□□□□ -0.9
SH2D4A-205ENST00000522328 SPG7Q9UQ90 795 aa9.46□□□□□ -0.9
SH2D4A-205ENST00000522328 CLSPNQ9HAW4 1339 aa9.46□□□□□ -0.9
SH2D4A-205ENST00000522328 C5P01031 1676 aa9.45□□□□□ -0.9
SH2D4A-205ENST00000522328 ANKRD26Q9UPS8 1709 aa9.45□□□□□ -0.9
SH2D4A-205ENST00000522328 CYP27B1O15528 508 aa9.45□□□□□ -0.9
SH2D4A-205ENST00000522328 MPRIPQ6WCQ1 1025 aa9.45□□□□□ -0.9
SH2D4A-205ENST00000522328 PELP1Q8IZL8 1130 aaKnown RBP9.45□□□□□ -0.9
SH2D4A-205ENST00000522328 CARD14Q9BXL6 1004 aa9.45□□□□□ -0.9
SH2D4A-205ENST00000522328 CD2APQ9Y5K6 639 aa9.45□□□□□ -0.9
SH2D4A-205ENST00000522328 WASHC2AQ641Q2 1341 aa9.45□□□□□ -0.9
SH2D4A-205ENST00000522328 C1QTNF8P60827 252 aa9.44□□□□□ -0.9
SH2D4A-205ENST00000522328 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.44□□□□□ -0.9
SH2D4A-205ENST00000522328 NLGN2Q8NFZ4 835 aa9.44□□□□□ -0.9
SH2D4A-205ENST00000522328 ARHGEF1Q92888 912 aaKnown RBP9.44□□□□□ -0.9
SH2D4A-205ENST00000522328 AK7Q96M32 723 aa9.44□□□□□ -0.9
SH2D4A-205ENST00000522328 EMILIN1Q9Y6C2 1016 aa9.44□□□□□ -0.9
SH2D4A-205ENST00000522328 E2F4Q16254 413 aa9.43□□□□□ -0.9
SH2D4A-205ENST00000522328 TAF1LQ8IZX4 1826 aa9.42□□□□□ -0.9
SH2D4A-205ENST00000522328 C4BP0C0L5 1744 aa9.42□□□□□ -0.9
SH2D4A-205ENST00000522328 TOGARAM1Q9Y4F4 1720 aa9.42□□□□□ -0.9
SH2D4A-205ENST00000522328 PPM1GO15355 546 aaPredicted RBP9.42□□□□□ -0.9
SH2D4A-205ENST00000522328 GIGYF1O75420 1035 aaPredicted RBP9.42□□□□□ -0.9
SH2D4A-205ENST00000522328 SSFA2P28290 1259 aa9.42□□□□□ -0.9
SH2D4A-205ENST00000522328 MSL1Q68DK7 614 aa9.42□□□□□ -0.9
SH2D4A-205ENST00000522328 IFNL2Q8IZJ0 200 aa9.42□□□□□ -0.9
SH2D4A-205ENST00000522328 PIGBQ92521 554 aa9.42□□□□□ -0.9
SH2D4A-205ENST00000522328 EYA1Q99502 592 aa9.42□□□□□ -0.9
SH2D4A-205ENST00000522328 TMEM106CQ9BVX2 250 aa9.42□□□□□ -0.9
SH2D4A-205ENST00000522328 TMOD3Q9NYL9 352 aa9.42□□□□□ -0.9
SH2D4A-205ENST00000522328 TRPC6Q9Y210 931 aa9.42□□□□□ -0.9
SH2D4A-205ENST00000522328 ITGB4P16144 1822 aa9.41□□□□□ -0.9
SH2D4A-205ENST00000522328 SENP3-EIF4A1A0A087X0R7 540 aa9.41□□□□□ -0.9
SH2D4A-205ENST00000522328 LOC102724428A0A0B4J2F2 783 aa9.41□□□□□ -0.9
SH2D4A-205ENST00000522328 YBX3P16989 372 aaKnown RBP eCLIP9.41□□□□□ -0.9
SH2D4A-205ENST00000522328 SIK1P57059 783 aa9.41□□□□□ -0.9
SH2D4A-205ENST00000522328 MS4A3Q96HJ5 214 aa9.41□□□□□ -0.9
SH2D4A-205ENST00000522328 POLKQ9UBT6 870 aa9.41□□□□□ -0.9
SH2D4A-205ENST00000522328 CEP350Q5VT06 3117 aa9.41□□□□□ -0.9
SH2D4A-205ENST00000522328 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.4□□□□□ -0.9
SH2D4A-205ENST00000522328 C19orf67A6NJJ6 358 aa9.4□□□□□ -0.9
SH2D4A-205ENST00000522328 PHKG2P15735 406 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms