RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ATP6V1AP38606 617 aa28.1■■■□□ 2.09
SDCBP-209ENST00000522243 ITPK1Q13572 414 aa28.1■■■□□ 2.09
SDCBP-209ENST00000522243 UBR3Q6ZT12 1888 aa28.1■■■□□ 2.09
SDCBP-209ENST00000522243 MAP3K5Q99683 1374 aa28.1■■■□□ 2.09
SDCBP-209ENST00000522243 PHF14O94880 888 aa28.09■■■□□ 2.09
SDCBP-209ENST00000522243 C1orf141Q5JVX7 400 aa28.09■■■□□ 2.09
SDCBP-209ENST00000522243 FLAD1Q8NFF5 587 aa28.09■■■□□ 2.09
SDCBP-209ENST00000522243 KDRP35968 1356 aa28.09■■■□□ 2.09
SDCBP-209ENST00000522243 HMOX1P09601 288 aa28.07■■■□□ 2.08
SDCBP-209ENST00000522243 CABP4P57796 275 aa28.07■■■□□ 2.08
SDCBP-209ENST00000522243 RBM42Q9BTD8 480 aaKnown RBP28.06■■■□□ 2.08
SDCBP-209ENST00000522243 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.05■■■□□ 2.08
SDCBP-209ENST00000522243 GNPATO15228 680 aa28.03■■■□□ 2.08
SDCBP-209ENST00000522243 DIAPH1O60610 1272 aaKnown RBP28.03■■■□□ 2.08
SDCBP-209ENST00000522243 NLGN2Q8NFZ4 835 aa28.03■■■□□ 2.08
SDCBP-209ENST00000522243 SLC4A9Q96Q91 983 aa28.03■■■□□ 2.08
SDCBP-209ENST00000522243 NPC1L1Q9UHC9 1359 aa28.01■■■□□ 2.07
SDCBP-209ENST00000522243 SCN11AQ9UI33 1791 aa28.01■■■□□ 2.07
SDCBP-209ENST00000522243 SSFA2P28290 1259 aa28■■■□□ 2.07
SDCBP-209ENST00000522243 GPR162Q16538 588 aa28■■■□□ 2.07
SDCBP-209ENST00000522243 PELP1Q8IZL8 1130 aaKnown RBP28■■■□□ 2.07
SDCBP-209ENST00000522243 NFATC2IPQ8NCF5 419 aa28■■■□□ 2.07
SDCBP-209ENST00000522243 AKAP4Q5JQC9 854 aa27.97■■■□□ 2.07
SDCBP-209ENST00000522243 VIRMAQ69YN4 1812 aaKnown RBP27.97■■■□□ 2.07
SDCBP-209ENST00000522243 PTCD1O75127 700 aaKnown RBP27.96■■■□□ 2.07
SDCBP-209ENST00000522243 ZNF831Q5JPB2 1677 aa27.96■■■□□ 2.07
SDCBP-209ENST00000522243 COL3A1P02461 1466 aaPredicted RBP27.95■■■□□ 2.07
SDCBP-209ENST00000522243 COL5A3P25940 1745 aaPredicted RBP27.95■■■□□ 2.07
SDCBP-209ENST00000522243 LGR6Q9HBX8 967 aa27.95■■■□□ 2.06
SDCBP-209ENST00000522243 CHD4Q14839 1912 aa27.94■■■□□ 2.06
SDCBP-209ENST00000522243 U2SURPO15042 1029 aaKnown RBP27.94■■■□□ 2.06
SDCBP-209ENST00000522243 MTHFSDQ2M296 383 aaKnown RBP27.94■■■□□ 2.06
SDCBP-209ENST00000522243 RTCBQ9Y3I0 505 aaKnown RBP27.93■■■□□ 2.06
SDCBP-209ENST00000522243 RNMTO43148 476 aaKnown RBP27.91■■■□□ 2.06
SDCBP-209ENST00000522243 TRAPPC3LQ5T215 181 aa27.9■■■□□ 2.06
SDCBP-209ENST00000522243 MYH14Q7Z406 1995 aaKnown RBP27.9■■■□□ 2.06
SDCBP-209ENST00000522243 RC3H1Q5TC82 1133 aaKnown RBP27.89■■■□□ 2.06
SDCBP-209ENST00000522243 SLC52A2Q9HAB3 445 aa27.89■■■□□ 2.06
SDCBP-209ENST00000522243 CD2APQ9Y5K6 639 aa27.89■■■□□ 2.06
SDCBP-209ENST00000522243 CNTNAP4Q9C0A0 1308 aa27.89■■■□□ 2.05
SDCBP-209ENST00000522243 TJP1Q07157 1748 aa27.88■■■□□ 2.05
SDCBP-209ENST00000522243 RPS6KA4O75676 772 aa27.87■■■□□ 2.05
SDCBP-209ENST00000522243 YBX3P16989 372 aaKnown RBP eCLIP27.87■■■□□ 2.05
SDCBP-209ENST00000522243 ARHGEF1Q92888 912 aaKnown RBP27.87■■■□□ 2.05
SDCBP-209ENST00000522243 SLC39A6Q13433 755 aa27.86■■■□□ 2.05
SDCBP-209ENST00000522243 MRC1P22897 1456 aa27.84■■■□□ 2.05
SDCBP-209ENST00000522243 CRKLP46109 303 aaKnown RBP27.84■■■□□ 2.05
SDCBP-209ENST00000522243 CFAP53Q96M91 514 aa27.84■■■□□ 2.05
SDCBP-209ENST00000522243 RFC4P35249 363 aa27.83■■■□□ 2.05
SDCBP-209ENST00000522243 ADAMTS7Q9UKP4 1686 aa27.83■■■□□ 2.05
SDCBP-209ENST00000522243 C4AP0C0L4 1744 aa27.83■■■□□ 2.05
SDCBP-209ENST00000522243 MMP10P09238 476 aa27.82■■■□□ 2.04
SDCBP-209ENST00000522243 ADRA2BP18089 450 aa27.82■■■□□ 2.04
SDCBP-209ENST00000522243 PPP2R1AP30153 589 aa27.82■■■□□ 2.04
SDCBP-209ENST00000522243 DNAJC10Q8IXB1 793 aa27.82■■■□□ 2.04
SDCBP-209ENST00000522243 ZNF784Q8NCA9 323 aaPredicted RBP27.82■■■□□ 2.04
SDCBP-209ENST00000522243 WWC3Q9ULE0 1092 aa27.81■■■□□ 2.04
SDCBP-209ENST00000522243 CICQ96RK0 1608 aaPredicted RBP27.8■■■□□ 2.04
SDCBP-209ENST00000522243 NLGN1Q8N2Q7 840 aa27.79■■■□□ 2.04
SDCBP-209ENST00000522243 GYS1P13807 737 aa27.78■■■□□ 2.04
SDCBP-209ENST00000522243 GAS2L2Q8NHY3 880 aa27.78■■■□□ 2.04
SDCBP-209ENST00000522243 GRIN3BO60391 1043 aa27.77■■■□□ 2.04
SDCBP-209ENST00000522243 PRKAR2BP31323 418 aa27.77■■■□□ 2.04
SDCBP-209ENST00000522243 INTS5Q6P9B9 1019 aaKnown RBP27.77■■■□□ 2.04
SDCBP-209ENST00000522243 SRP68Q9UHB9 627 aaKnown RBP27.77■■■□□ 2.04
SDCBP-209ENST00000522243 KCPQ6ZWJ8 1503 aa27.77■■■□□ 2.04
SDCBP-209ENST00000522243 GNAT3A8MTJ3 354 aa27.76■■■□□ 2.03
SDCBP-209ENST00000522243 IL17REQ8NFR9 667 aa27.76■■■□□ 2.03
SDCBP-209ENST00000522243 PHACTR3Q96KR7 559 aa27.76■■■□□ 2.03
SDCBP-209ENST00000522243 RSPH6AQ9H0K4 717 aa27.76■■■□□ 2.03
SDCBP-209ENST00000522243 NUDCQ9Y266 331 aa27.76■■■□□ 2.03
SDCBP-209ENST00000522243 U2AF1L5P0DN76 240 aaPredicted RBP27.74■■■□□ 2.03
SDCBP-209ENST00000522243 U2AF1Q01081 240 aaKnown RBP eCLIP27.74■■■□□ 2.03
SDCBP-209ENST00000522243 CCDC87Q9NVE4 849 aa27.74■■■□□ 2.03
SDCBP-209ENST00000522243 TEFQ10587 303 aa27.73■■■□□ 2.03
SDCBP-209ENST00000522243 CYP19A1P11511 503 aaPredicted RBP27.72■■■□□ 2.03
SDCBP-209ENST00000522243 UBR2Q8IWV8 1755 aa27.72■■■□□ 2.03
SDCBP-209ENST00000522243 TTC5Q8N0Z6 440 aa27.71■■■□□ 2.03
SDCBP-209ENST00000522243 PARP3Q9Y6F1 533 aa27.71■■■□□ 2.03
SDCBP-209ENST00000522243 KIF13BQ9NQT8 1826 aa27.71■■■□□ 2.03
SDCBP-209ENST00000522243 SIPA1L3O60292 1781 aaPredicted RBP27.71■■■□□ 2.03
SDCBP-209ENST00000522243 N4BP2Q86UW6 1770 aaPredicted RBP27.71■■■□□ 2.03
SDCBP-209ENST00000522243 USP42Q9H9J4 1324 aaKnown RBP27.7■■■□□ 2.03
SDCBP-209ENST00000522243 FKBP8Q14318 412 aa27.7■■■□□ 2.02
SDCBP-209ENST00000522243 ZBTB1Q9Y2K1 713 aa27.69■■■□□ 2.02
SDCBP-209ENST00000522243 SOS1Q07889 1333 aaPredicted RBP27.68■■■□□ 2.02
SDCBP-209ENST00000522243 KIAA1551Q9HCM1 1747 aa27.68■■■□□ 2.02
SDCBP-209ENST00000522243 UTRNP46939 3433 aa27.68■■■□□ 2.02
SDCBP-209ENST00000522243 VSIG10Q8N0Z9 540 aa27.67■■■□□ 2.02
SDCBP-209ENST00000522243 C10orf71Q711Q0 1435 aa27.67■■■□□ 2.02
SDCBP-209ENST00000522243 PXDNLA1KZ92 1463 aa27.66■■■□□ 2.02
SDCBP-209ENST00000522243 USPL1Q5W0Q7 1092 aa27.66■■■□□ 2.02
SDCBP-209ENST00000522243 ZNF790Q6PG37 636 aa27.66■■■□□ 2.02
SDCBP-209ENST00000522243 ZNF496Q96IT1 587 aaPredicted RBP27.66■■■□□ 2.02
SDCBP-209ENST00000522243 A0A0G2JLW4 131 aa27.65■■■□□ 2.02
SDCBP-209ENST00000522243 ZPR1O75312 459 aa27.65■■■□□ 2.02
SDCBP-209ENST00000522243 CANXP27824 592 aaKnown RBP27.65■■■□□ 2.02
SDCBP-209ENST00000522243 FCHSD2O94868 740 aa27.64■■■□□ 2.02
SDCBP-209ENST00000522243 TGFB2P61812 414 aa27.64■■■□□ 2.02
SDCBP-209ENST00000522243 DDR1Q08345 913 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms