RNA–Protein interactions for RNA: ENST00000522039.1

HR-208, Transcript of HR, lysine demethylase and nuclear receptor corepressor, humanhuman

TSL 4

Gene HR, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HR-208ENST00000522039 ATG3Q9NT62 314 aa23.3■■□□□ 1.32
HR-208ENST00000522039 UBR3Q6ZT12 1888 aa23.3■■□□□ 1.32
HR-208ENST00000522039 CICQ96RK0 1608 aaPredicted RBP23.29■■□□□ 1.32
HR-208ENST00000522039 PTGER2P43116 358 aa23.28■■□□□ 1.32
HR-208ENST00000522039 ATF5Q9Y2D1 282 aaPredicted RBP23.28■■□□□ 1.32
HR-208ENST00000522039 COL5A3P25940 1745 aaPredicted RBP23.28■■□□□ 1.32
HR-208ENST00000522039 MTHFSDQ2M296 383 aaKnown RBP23.27■■□□□ 1.32
HR-208ENST00000522039 FLAD1Q8NFF5 587 aa23.27■■□□□ 1.32
HR-208ENST00000522039 GAS2L2Q8NHY3 880 aa23.26■■□□□ 1.31
HR-208ENST00000522039 AK7Q96M32 723 aa23.26■■□□□ 1.31
HR-208ENST00000522039 SGIP1Q9BQI5 828 aa23.25■■□□□ 1.31
HR-208ENST00000522039 ATP6V1AP38606 617 aa23.24■■□□□ 1.31
HR-208ENST00000522039 NFATC2IPQ8NCF5 419 aa23.24■■□□□ 1.31
HR-208ENST00000522039 SLC52A2Q9HAB3 445 aa23.24■■□□□ 1.31
HR-208ENST00000522039 MAP3K5Q99683 1374 aa23.24■■□□□ 1.31
HR-208ENST00000522039 RNMTO43148 476 aaKnown RBP23.23■■□□□ 1.31
HR-208ENST00000522039 RSPH6AQ9H0K4 717 aa23.23■■□□□ 1.31
HR-208ENST00000522039 U2AF1L5P0DN76 240 aaPredicted RBP23.22■■□□□ 1.31
HR-208ENST00000522039 U2AF1Q01081 240 aaKnown RBP eCLIP23.22■■□□□ 1.31
HR-208ENST00000522039 DDX10Q13206 875 aaKnown RBP23.22■■□□□ 1.31
HR-208ENST00000522039 ITPK1Q13572 414 aa23.22■■□□□ 1.31
HR-208ENST00000522039 RALBP1Q15311 655 aa23.22■■□□□ 1.31
HR-208ENST00000522039 COL23A1Q86Y22 540 aaPredicted RBP23.22■■□□□ 1.31
HR-208ENST00000522039 LINC00116Q8NCU8 138 aa23.22■■□□□ 1.31
HR-208ENST00000522039 PRKAR2BP31323 418 aa23.21■■□□□ 1.31
HR-208ENST00000522039 TJP1Q07157 1748 aa23.21■■□□□ 1.31
HR-208ENST00000522039 SIPA1L3O60292 1781 aaPredicted RBP23.21■■□□□ 1.31
HR-208ENST00000522039 MSH5O43196 834 aa23.2■■□□□ 1.3
HR-208ENST00000522039 FCHSD2O94868 740 aa23.2■■□□□ 1.3
HR-208ENST00000522039 SSFA2P28290 1259 aa23.2■■□□□ 1.3
HR-208ENST00000522039 POLD1P28340 1107 aa23.2■■□□□ 1.3
HR-208ENST00000522039 RBM42Q9BTD8 480 aaKnown RBP23.2■■□□□ 1.3
HR-208ENST00000522039 LGR6Q9HBX8 967 aa23.2■■□□□ 1.3
HR-208ENST00000522039 UBR2Q8IWV8 1755 aa23.19■■□□□ 1.3
HR-208ENST00000522039 GNAT3A8MTJ3 354 aa23.19■■□□□ 1.3
HR-208ENST00000522039 ARXQ96QS3 562 aa23.19■■□□□ 1.3
HR-208ENST00000522039 CNTNAP4Q9C0A0 1308 aa23.17■■□□□ 1.3
HR-208ENST00000522039 SLC4A9Q96Q91 983 aa23.17■■□□□ 1.3
HR-208ENST00000522039 GNPATO15228 680 aa23.16■■□□□ 1.3
HR-208ENST00000522039 RC3H1Q5TC82 1133 aaKnown RBP23.16■■□□□ 1.3
HR-208ENST00000522039 KCPQ6ZWJ8 1503 aa23.15■■□□□ 1.3
HR-208ENST00000522039 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.15■■□□□ 1.3
HR-208ENST00000522039 PTCD1O75127 700 aaKnown RBP23.15■■□□□ 1.3
HR-208ENST00000522039 PHACTR3Q96KR7 559 aa23.15■■□□□ 1.3
HR-208ENST00000522039 PHF14O94880 888 aa23.14■■□□□ 1.29
HR-208ENST00000522039 FHDC1Q9C0D6 1143 aaPredicted RBP23.14■■□□□ 1.29
HR-208ENST00000522039 CEMIPQ8WUJ3 1361 aa23.14■■□□□ 1.29
HR-208ENST00000522039 MYBBP1AQ9BQG0 1328 aaKnown RBP23.13■■□□□ 1.29
HR-208ENST00000522039 NEFMP07197 916 aa23.13■■□□□ 1.29
HR-208ENST00000522039 TEFQ10587 303 aa23.13■■□□□ 1.29
HR-208ENST00000522039 C4AP0C0L4 1744 aa23.12■■□□□ 1.29
HR-208ENST00000522039 ADRA2BP18089 450 aa23.12■■□□□ 1.29
HR-208ENST00000522039 AMIGO3Q86WK7 504 aa23.12■■□□□ 1.29
HR-208ENST00000522039 RTCBQ9Y3I0 505 aaKnown RBP23.12■■□□□ 1.29
HR-208ENST00000522039 MYH14Q7Z406 1995 aaKnown RBP23.12■■□□□ 1.29
HR-208ENST00000522039 DCAF8L1A6NGE4 600 aa23.11■■□□□ 1.29
HR-208ENST00000522039 IL17REQ8NFR9 667 aa23.11■■□□□ 1.29
HR-208ENST00000522039 SYT17Q9BSW7 474 aa23.1■■□□□ 1.29
HR-208ENST00000522039 PNNQ9H307 717 aaKnown RBP23.1■■□□□ 1.29
HR-208ENST00000522039 DLG5Q8TDM6 1919 aa23.1■■□□□ 1.29
HR-208ENST00000522039 MSL1Q68DK7 614 aa23.09■■□□□ 1.29
HR-208ENST00000522039 TTC5Q8N0Z6 440 aa23.09■■□□□ 1.29
HR-208ENST00000522039 VSIG10Q8N0Z9 540 aa23.09■■□□□ 1.29
HR-208ENST00000522039 HTATSF1O43719 755 aaKnown RBP23.08■■□□□ 1.29
HR-208ENST00000522039 RPS6KA4O75676 772 aa23.08■■□□□ 1.29
HR-208ENST00000522039 SLC39A6Q13433 755 aa23.08■■□□□ 1.29
HR-208ENST00000522039 RTF1Q92541 710 aaKnown RBP23.08■■□□□ 1.29
HR-208ENST00000522039 CRKLP46109 303 aaKnown RBP23.07■■□□□ 1.28
HR-208ENST00000522039 TRAPPC3LQ5T215 181 aa23.07■■□□□ 1.28
HR-208ENST00000522039 ZNF790Q6PG37 636 aa23.05■■□□□ 1.28
HR-208ENST00000522039 SMIM5Q71RC9 77 aa23.05■■□□□ 1.28
HR-208ENST00000522039 DNAJC10Q8IXB1 793 aa23.04■■□□□ 1.28
HR-208ENST00000522039 PLEKHF1Q96S99 279 aa23.04■■□□□ 1.28
HR-208ENST00000522039 MAPK8IP3Q9UPT6 1336 aa23.04■■□□□ 1.28
HR-208ENST00000522039 CCDC87Q9NVE4 849 aa23.03■■□□□ 1.28
HR-208ENST00000522039 CYP19A1P11511 503 aaPredicted RBP23.02■■□□□ 1.28
HR-208ENST00000522039 RFC4P35249 363 aa23.02■■□□□ 1.28
HR-208ENST00000522039 KLHL34Q8N239 644 aa23.02■■□□□ 1.28
HR-208ENST00000522039 ARHGEF1Q92888 912 aaKnown RBP23.02■■□□□ 1.28
HR-208ENST00000522039 PRKRIP1Q9H875 184 aaPredicted RBP23.02■■□□□ 1.28
HR-208ENST00000522039 HEG1Q9ULI3 1381 aa23.01■■□□□ 1.27
HR-208ENST00000522039 INTS5Q6P9B9 1019 aaKnown RBP23.01■■□□□ 1.27
HR-208ENST00000522039 BTBD11A6QL63 1104 aa23■■□□□ 1.27
HR-208ENST00000522039 MCM10Q7L590 875 aa23■■□□□ 1.27
HR-208ENST00000522039 NLGN1Q8N2Q7 840 aa23■■□□□ 1.27
HR-208ENST00000522039 ZNF496Q96IT1 587 aaPredicted RBP23■■□□□ 1.27
HR-208ENST00000522039 FMNL2Q96PY5 1086 aa23■■□□□ 1.27
HR-208ENST00000522039 TEX13AQ9BXU3 409 aaPredicted RBP23■■□□□ 1.27
HR-208ENST00000522039 STARD3NLO95772 234 aa22.99■■□□□ 1.27
HR-208ENST00000522039 NFE2L2Q16236 605 aa22.99■■□□□ 1.27
HR-208ENST00000522039 CD2APQ9Y5K6 639 aa22.99■■□□□ 1.27
HR-208ENST00000522039 SOS1Q07889 1333 aaPredicted RBP22.98■■□□□ 1.27
HR-208ENST00000522039 KDM3BQ7LBC6 1761 aa22.97■■□□□ 1.27
HR-208ENST00000522039 KIF13BQ9NQT8 1826 aa22.97■■□□□ 1.27
HR-208ENST00000522039 USP42Q9H9J4 1324 aaKnown RBP22.97■■□□□ 1.27
HR-208ENST00000522039 ZNF316A6NFI3 1004 aaPredicted RBP22.96■■□□□ 1.27
HR-208ENST00000522039 GYS1P13807 737 aa22.96■■□□□ 1.27
HR-208ENST00000522039 COL15A1P39059 1388 aa22.96■■□□□ 1.27
HR-208ENST00000522039 MMP10P09238 476 aa22.95■■□□□ 1.26
HR-208ENST00000522039 DCTN1Q14203 1278 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms