RNA–Protein interactions for RNA: ENST00000521836.1

TCEA1-209, Transcript of transcription elongation factor A1, human

TSL 4

Gene TCEA1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCEA1-209	ENST00000521836	MTHFS	P49914	203 aa		32.91	■■■□□ 2.86
TCEA1-209	ENST00000521836	CABP4	P57796	275 aa		32.91	■■■□□ 2.86
TCEA1-209	ENST00000521836	LINC00116	Q8NCU8	138 aa		32.91	■■■□□ 2.86
TCEA1-209	ENST00000521836	PHF14	O94880	888 aa		32.9	■■■□□ 2.86
TCEA1-209	ENST00000521836	SULT6B1	Q6IMI4	303 aa		32.9	■■■□□ 2.86
TCEA1-209	ENST00000521836	ZNF784	Q8NCA9	323 aa	Predicted RBP	32.89	■■■□□ 2.86
TCEA1-209	ENST00000521836	GNPAT	O15228	680 aa		32.88	■■■□□ 2.85
TCEA1-209	ENST00000521836	IL13	P35225	146 aa		32.88	■■■□□ 2.85
TCEA1-209	ENST00000521836	NLGN2	Q8NFZ4	835 aa		32.88	■■■□□ 2.85
TCEA1-209	ENST00000521836	KDR	P35968	1356 aa		32.87	■■■□□ 2.85
TCEA1-209	ENST00000521836	UBR3	Q6ZT12	1888 aa		32.86	■■■□□ 2.85
TCEA1-209	ENST00000521836	ITPK1	Q13572	414 aa		32.86	■■■□□ 2.85
TCEA1-209	ENST00000521836	AEBP1	Q8IUX7	1158 aa		32.85	■■■□□ 2.85
TCEA1-209	ENST00000521836	RBM42	Q9BTD8	480 aa	Known RBP	32.85	■■■□□ 2.85
TCEA1-209	ENST00000521836	RTCB	Q9Y3I0	505 aa	Known RBP	32.84	■■■□□ 2.85
TCEA1-209	ENST00000521836	TRAPPC3L	Q5T215	181 aa		32.83	■■■□□ 2.85
TCEA1-209	ENST00000521836	RC3H1	Q5TC82	1133 aa	Known RBP	32.83	■■■□□ 2.85
TCEA1-209	ENST00000521836	ZNF831	Q5JPB2	1677 aa		32.82	■■■□□ 2.84
TCEA1-209	ENST00000521836	PER1	O15534	1290 aa	Predicted RBP	32.82	■■■□□ 2.84
TCEA1-209	ENST00000521836	ADRA2B	P18089	450 aa		32.82	■■■□□ 2.84
TCEA1-209	ENST00000521836	KDM6A	O15550	1401 aa	Predicted RBP	32.79	■■■□□ 2.84
TCEA1-209	ENST00000521836	AKAP4	Q5JQC9	854 aa		32.79	■■■□□ 2.84
TCEA1-209	ENST00000521836	AMIGO3	Q86WK7	504 aa		32.79	■■■□□ 2.84
TCEA1-209	ENST00000521836	CNTNAP4	Q9C0A0	1308 aa		32.77	■■■□□ 2.84
TCEA1-209	ENST00000521836	NLGN1	Q8N2Q7	840 aa		32.77	■■■□□ 2.84
TCEA1-209	ENST00000521836	NFATC2IP	Q8NCF5	419 aa		32.77	■■■□□ 2.84
TCEA1-209	ENST00000521836	NPC1L1	Q9UHC9	1359 aa		32.76	■■■□□ 2.83
TCEA1-209	ENST00000521836	DIAPH1	O60610	1272 aa	Known RBP	32.76	■■■□□ 2.83
TCEA1-209	ENST00000521836	CC2D1B	Q5T0F9	858 aa	Known RBP	32.76	■■■□□ 2.83
TCEA1-209	ENST00000521836	RPS6KA4	O75676	772 aa		32.73	■■■□□ 2.83
TCEA1-209	ENST00000521836	YBX3	P16989	372 aa	Known RBP eCLIP	32.73	■■■□□ 2.83
TCEA1-209	ENST00000521836	RFC4	P35249	363 aa		32.72	■■■□□ 2.83
TCEA1-209	ENST00000521836	SMIM5	Q71RC9	77 aa		32.72	■■■□□ 2.83
TCEA1-209	ENST00000521836	SLC4A9	Q96Q91	983 aa		32.72	■■■□□ 2.83
TCEA1-209	ENST00000521836	UTRN	P46939	3433 aa		32.71	■■■□□ 2.83
TCEA1-209	ENST00000521836	PTCD1	O75127	700 aa	Known RBP	32.7	■■■□□ 2.83
TCEA1-209	ENST00000521836	MMP10	P09238	476 aa		32.68	■■■□□ 2.82
TCEA1-209	ENST00000521836	HMOX1	P09601	288 aa		32.68	■■■□□ 2.82
TCEA1-209	ENST00000521836	ARHGEF1	Q92888	912 aa	Known RBP	32.68	■■■□□ 2.82
TCEA1-209	ENST00000521836	SLC52A2	Q9HAB3	445 aa		32.68	■■■□□ 2.82
TCEA1-209	ENST00000521836	COL5A3	P25940	1745 aa	Predicted RBP	32.65	■■■□□ 2.82
TCEA1-209	ENST00000521836	SCN11A	Q9UI33	1791 aa		32.65	■■■□□ 2.82
TCEA1-209	ENST00000521836	TGFB2	P61812	414 aa		32.63	■■■□□ 2.81
TCEA1-209	ENST00000521836	RNMT	O43148	476 aa	Known RBP	32.62	■■■□□ 2.81
TCEA1-209	ENST00000521836	CRKL	P46109	303 aa	Known RBP	32.62	■■■□□ 2.81
TCEA1-209	ENST00000521836	PARP3	Q9Y6F1	533 aa		32.62	■■■□□ 2.81
TCEA1-209	ENST00000521836	CCDC87	Q9NVE4	849 aa		32.61	■■■□□ 2.81
TCEA1-209	ENST00000521836	GYS1	P13807	737 aa		32.6	■■■□□ 2.81
TCEA1-209	ENST00000521836	MTHFSD	Q2M296	383 aa	Known RBP	32.6	■■■□□ 2.81
TCEA1-209	ENST00000521836	CFAP53	Q96M91	514 aa		32.6	■■■□□ 2.81
TCEA1-209	ENST00000521836	LGR6	Q9HBX8	967 aa		32.6	■■■□□ 2.81
TCEA1-209	ENST00000521836	GIGYF1	O75420	1035 aa	Predicted RBP	32.59	■■■□□ 2.81
TCEA1-209	ENST00000521836	CIC	Q96RK0	1608 aa	Predicted RBP	32.58	■■■□□ 2.81
TCEA1-209	ENST00000521836	U2SURP	O15042	1029 aa	Known RBP	32.57	■■■□□ 2.8
TCEA1-209	ENST00000521836	C1QTNF8	P60827	252 aa		32.57	■■■□□ 2.8
TCEA1-209	ENST00000521836	GAS2L2	Q8NHY3	880 aa		32.57	■■■□□ 2.8
TCEA1-209	ENST00000521836	MRC1	P22897	1456 aa		32.55	■■■□□ 2.8
TCEA1-209	ENST00000521836	VSIG10	Q8N0Z9	540 aa		32.55	■■■□□ 2.8
TCEA1-209	ENST00000521836	CNGB1	Q14028	1251 aa	Predicted RBP	32.54	■■■□□ 2.8
TCEA1-209	ENST00000521836	MYH14	Q7Z406	1995 aa	Known RBP	32.53	■■■□□ 2.8
TCEA1-209	ENST00000521836	USP42	Q9H9J4	1324 aa	Known RBP	32.52	■■■□□ 2.8
TCEA1-209	ENST00000521836	ZPR1	O75312	459 aa		32.52	■■■□□ 2.8
TCEA1-209	ENST00000521836	TTC5	Q8N0Z6	440 aa		32.52	■■■□□ 2.8
TCEA1-209	ENST00000521836	NUDC	Q9Y266	331 aa		32.52	■■■□□ 2.8
TCEA1-209	ENST00000521836	GOLGB1	Q14789	3259 aa	Known RBP	32.51	■■■□□ 2.8
TCEA1-209	ENST00000521836	INTS5	Q6P9B9	1019 aa	Known RBP	32.51	■■■□□ 2.79
TCEA1-209	ENST00000521836	DNAJC10	Q8IXB1	793 aa		32.51	■■■□□ 2.79
TCEA1-209	ENST00000521836	C10orf71	Q711Q0	1435 aa		32.51	■■■□□ 2.79
TCEA1-209	ENST00000521836	KIF13B	Q9NQT8	1826 aa		32.5	■■■□□ 2.79
TCEA1-209	ENST00000521836	GNAT3	A8MTJ3	354 aa		32.5	■■■□□ 2.79
TCEA1-209	ENST00000521836	C4A	P0C0L4	1744 aa		32.5	■■■□□ 2.79
TCEA1-209	ENST00000521836	COL3A1	P02461	1466 aa	Predicted RBP	32.49	■■■□□ 2.79
TCEA1-209	ENST00000521836	TJP1	Q07157	1748 aa		32.49	■■■□□ 2.79
TCEA1-209	ENST00000521836	TEF	Q10587	303 aa		32.49	■■■□□ 2.79
TCEA1-209	ENST00000521836	SLC39A6	Q13433	755 aa		32.49	■■■□□ 2.79
TCEA1-209	ENST00000521836	ADAMTS7	Q9UKP4	1686 aa		32.47	■■■□□ 2.79
TCEA1-209	ENST00000521836	CYP19A1	P11511	503 aa	Predicted RBP	32.47	■■■□□ 2.79
TCEA1-209	ENST00000521836	PXDNL	A1KZ92	1463 aa		32.47	■■■□□ 2.79
TCEA1-209	ENST00000521836	ATP10D	Q9P241	1426 aa		32.46	■■■□□ 2.79
TCEA1-209	ENST00000521836	STARD3NL	O95772	234 aa		32.46	■■■□□ 2.79
TCEA1-209	ENST00000521836	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.46	■■■□□ 2.79
TCEA1-209	ENST00000521836	GPBP1L1	Q9HC44	474 aa	Predicted RBP	32.46	■■■□□ 2.79
TCEA1-209	ENST00000521836	SRP68	Q9UHB9	627 aa	Known RBP	32.45	■■■□□ 2.79
TCEA1-209	ENST00000521836	WWC3	Q9ULE0	1092 aa		32.45	■■■□□ 2.79
TCEA1-209	ENST00000521836	SOS1	Q07889	1333 aa	Predicted RBP	32.45	■■■□□ 2.78
TCEA1-209	ENST00000521836	VIRMA	Q69YN4	1812 aa	Known RBP	32.44	■■■□□ 2.78
TCEA1-209	ENST00000521836		A0A0G2JLW4	131 aa		32.44	■■■□□ 2.78
TCEA1-209	ENST00000521836	FKBP8	Q14318	412 aa		32.44	■■■□□ 2.78
TCEA1-209	ENST00000521836	BCS1L	Q9Y276	419 aa		32.44	■■■□□ 2.78
TCEA1-209	ENST00000521836	SENP3-EIF4A1	A0A087X0R7	540 aa		32.42	■■■□□ 2.78
TCEA1-209	ENST00000521836	NARF	Q9UHQ1	456 aa		32.42	■■■□□ 2.78
TCEA1-209	ENST00000521836	KCP	Q6ZWJ8	1503 aa		32.41	■■■□□ 2.78
TCEA1-209	ENST00000521836	DPEP1	P16444	411 aa		32.41	■■■□□ 2.78
TCEA1-209	ENST00000521836	ADCY9	O60503	1353 aa		32.41	■■■□□ 2.78
TCEA1-209	ENST00000521836	USPL1	Q5W0Q7	1092 aa		32.4	■■■□□ 2.78
TCEA1-209	ENST00000521836		A0A087WZG4	1122 aa		32.39	■■■□□ 2.78
TCEA1-209	ENST00000521836	TM4SF1	P30408	202 aa		32.39	■■■□□ 2.78
TCEA1-209	ENST00000521836	ZNF790	Q6PG37	636 aa		32.39	■■■□□ 2.78
TCEA1-209	ENST00000521836	IL17RE	Q8NFR9	667 aa		32.39	■■■□□ 2.78
TCEA1-209	ENST00000521836	PIM2	Q9P1W9	311 aa		32.39	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms