RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 C9orf131Q5VYM1 1079 aa14.77□□□□□ -0.05
MRPS28-208ENST00000521605 KIAA1551Q9HCM1 1747 aa14.77□□□□□ -0.05
MRPS28-208ENST00000521605 GNPATO15228 680 aa14.76□□□□□ -0.05
MRPS28-208ENST00000521605 HSPA1AP0DMV8 641 aaKnown RBP14.76□□□□□ -0.05
MRPS28-208ENST00000521605 HSPA1BP0DMV9 641 aaKnown RBP14.76□□□□□ -0.05
MRPS28-208ENST00000521605 TATP17735 454 aaPredicted RBP14.76□□□□□ -0.05
MRPS28-208ENST00000521605 SSFA2P28290 1259 aa14.76□□□□□ -0.05
MRPS28-208ENST00000521605 CDCA8Q53HL2 280 aa14.76□□□□□ -0.05
MRPS28-208ENST00000521605 LINC00116Q8NCU8 138 aa14.76□□□□□ -0.05
MRPS28-208ENST00000521605 SMARCC1Q92922 1105 aaPredicted RBP14.76□□□□□ -0.05
MRPS28-208ENST00000521605 PCDH11XQ9BZA7 1347 aa14.75□□□□□ -0.05
MRPS28-208ENST00000521605 PCDH11YQ9BZA8 1340 aa14.75□□□□□ -0.05
MRPS28-208ENST00000521605 DPEP1P16444 411 aa14.75□□□□□ -0.05
MRPS28-208ENST00000521605 COG3Q96JB2 828 aa14.75□□□□□ -0.05
MRPS28-208ENST00000521605 RRAGCQ9HB90 399 aa14.75□□□□□ -0.05
MRPS28-208ENST00000521605 TERF2IPQ9NYB0 399 aa14.75□□□□□ -0.05
MRPS28-208ENST00000521605 CGNL1Q0VF96 1302 aa14.74□□□□□ -0.05
MRPS28-208ENST00000521605 KDM2BQ8NHM5 1336 aa14.74□□□□□ -0.05
MRPS28-208ENST00000521605 TGFB2P61812 414 aa14.74□□□□□ -0.05
MRPS28-208ENST00000521605 PLEKHG2Q9H7P9 1386 aa14.73□□□□□ -0.05
MRPS28-208ENST00000521605 ITGB4P16144 1822 aa14.73□□□□□ -0.05
MRPS28-208ENST00000521605 KIF13BQ9NQT8 1826 aa14.73□□□□□ -0.05
MRPS28-208ENST00000521605 PKD1L3Q7Z443 1732 aa14.73□□□□□ -0.05
MRPS28-208ENST00000521605 TMF1P82094 1093 aa14.73□□□□□ -0.05
MRPS28-208ENST00000521605 RRS1Q15050 365 aaKnown RBP14.73□□□□□ -0.05
MRPS28-208ENST00000521605 LOC102724428A0A0B4J2F2 783 aa14.72□□□□□ -0.05
MRPS28-208ENST00000521605 CYP27B1O15528 508 aa14.72□□□□□ -0.05
MRPS28-208ENST00000521605 SIK1P57059 783 aa14.72□□□□□ -0.05
MRPS28-208ENST00000521605 PIGBQ92521 554 aa14.72□□□□□ -0.05
MRPS28-208ENST00000521605 PRKRIP1Q9H875 184 aaPredicted RBP14.72□□□□□ -0.05
MRPS28-208ENST00000521605 RNF181Q9P0P0 153 aa14.72□□□□□ -0.05
MRPS28-208ENST00000521605 SMC1BQ8NDV3 1235 aa14.71□□□□□ -0.05
MRPS28-208ENST00000521605 RNF39Q9H2S5 420 aa14.71□□□□□ -0.05
MRPS28-208ENST00000521605 C10orf71Q711Q0 1435 aa14.71□□□□□ -0.05
MRPS28-208ENST00000521605 SMG6Q86US8 1419 aaKnown RBP14.71□□□□□ -0.05
MRPS28-208ENST00000521605 ITPK1Q13572 414 aa14.7□□□□□ -0.06
MRPS28-208ENST00000521605 PUS7Q96PZ0 661 aaKnown RBP14.7□□□□□ -0.06
MRPS28-208ENST00000521605 CCDC87Q9NVE4 849 aa14.7□□□□□ -0.06
MRPS28-208ENST00000521605 TNRC6CQ9HCJ0 1690 aaKnown RBP14.69□□□□□ -0.06
MRPS28-208ENST00000521605 SLC34A2O95436 690 aa14.69□□□□□ -0.06
MRPS28-208ENST00000521605 ATP6V1AP38606 617 aa14.69□□□□□ -0.06
MRPS28-208ENST00000521605 RTL1A6NKG5 1358 aa14.69□□□□□ -0.06
MRPS28-208ENST00000521605 MAP2P11137 1827 aaKnown RBP14.69□□□□□ -0.06
MRPS28-208ENST00000521605 BRCA1P38398 1863 aaKnown RBP14.67□□□□□ -0.06
MRPS28-208ENST00000521605 C4AP0C0L4 1744 aa14.67□□□□□ -0.06
MRPS28-208ENST00000521605 TRAPPC3LQ5T215 181 aa14.67□□□□□ -0.06
MRPS28-208ENST00000521605 NLGN1Q8N2Q7 840 aa14.67□□□□□ -0.06
MRPS28-208ENST00000521605 ASAP1Q9ULH1 1129 aa14.67□□□□□ -0.06
MRPS28-208ENST00000521605 PARP3Q9Y6F1 533 aa14.67□□□□□ -0.06
MRPS28-208ENST00000521605 HSP90AB2PQ58FF8 381 aa14.66□□□□□ -0.06
MRPS28-208ENST00000521605 TMOD3Q9NYL9 352 aa14.66□□□□□ -0.06
MRPS28-208ENST00000521605 PIM2Q9P1W9 311 aa14.66□□□□□ -0.06
MRPS28-208ENST00000521605 RTCBQ9Y3I0 505 aaKnown RBP14.66□□□□□ -0.06
MRPS28-208ENST00000521605 ARFGEF1Q9Y6D6 1849 aa14.66□□□□□ -0.06
MRPS28-208ENST00000521605 KCNA3P22001 575 aa14.65□□□□□ -0.06
MRPS28-208ENST00000521605 RALBP1Q15311 655 aa14.65□□□□□ -0.06
MRPS28-208ENST00000521605 DALRD3Q5D0E6 543 aaKnown RBP14.65□□□□□ -0.06
MRPS28-208ENST00000521605 NPC1L1Q9UHC9 1359 aa14.64□□□□□ -0.07
MRPS28-208ENST00000521605 DCAF5Q96JK2 942 aa14.64□□□□□ -0.07
MRPS28-208ENST00000521605 GGNBP2Q9H3C7 697 aa14.64□□□□□ -0.07
MRPS28-208ENST00000521605 GYS1P13807 737 aa14.63□□□□□ -0.07
MRPS28-208ENST00000521605 ARHGEF1Q92888 912 aaKnown RBP14.63□□□□□ -0.07
MRPS28-208ENST00000521605 PER1O15534 1290 aaPredicted RBP14.62□□□□□ -0.07
MRPS28-208ENST00000521605 CHRNA5P30532 468 aa14.62□□□□□ -0.07
MRPS28-208ENST00000521605 RFC4P35249 363 aa14.62□□□□□ -0.07
MRPS28-208ENST00000521605 RASSF7Q02833 373 aa14.62□□□□□ -0.07
MRPS28-208ENST00000521605 INSRP06213 1382 aa14.61□□□□□ -0.07
MRPS28-208ENST00000521605 RBM42Q9BTD8 480 aaKnown RBP14.61□□□□□ -0.07
MRPS28-208ENST00000521605 ATG3Q9NT62 314 aa14.61□□□□□ -0.07
MRPS28-208ENST00000521605 SPG7Q9UQ90 795 aa14.61□□□□□ -0.07
MRPS28-208ENST00000521605 VEGFAP15692 232 aaPredicted RBP14.6□□□□□ -0.07
MRPS28-208ENST00000521605 NKX1-1Q15270 411 aaPredicted RBP14.6□□□□□ -0.07
MRPS28-208ENST00000521605 MKRN1Q9UHC7 482 aaKnown RBP14.6□□□□□ -0.07
MRPS28-208ENST00000521605 SBF1O95248 1867 aa14.6□□□□□ -0.07
MRPS28-208ENST00000521605 FLT4P35916 1363 aa14.6□□□□□ -0.07
MRPS28-208ENST00000521605 HOXD11P31277 338 aaPredicted RBP14.59□□□□□ -0.07
MRPS28-208ENST00000521605 FYB1O15117 783 aa14.58□□□□□ -0.08
MRPS28-208ENST00000521605 SLC4A9Q96Q91 983 aa14.58□□□□□ -0.08
MRPS28-208ENST00000521605 GLTPD2A6NH11 291 aa14.57□□□□□ -0.08
MRPS28-208ENST00000521605 FOXN1O15353 648 aa14.57□□□□□ -0.08
MRPS28-208ENST00000521605 SRP68Q9UHB9 627 aaKnown RBP14.57□□□□□ -0.08
MRPS28-208ENST00000521605 KDRP35968 1356 aa14.57□□□□□ -0.08
MRPS28-208ENST00000521605 PPM1GO15355 546 aaPredicted RBP14.56□□□□□ -0.08
MRPS28-208ENST00000521605 RPS6KA4O75676 772 aa14.56□□□□□ -0.08
MRPS28-208ENST00000521605 DDR1Q08345 913 aa14.56□□□□□ -0.08
MRPS28-208ENST00000521605 FAM161AQ3B820 660 aa14.56□□□□□ -0.08
MRPS28-208ENST00000521605 YTHDC1Q96MU7 727 aaKnown RBP14.56□□□□□ -0.08
MRPS28-208ENST00000521605 MYBBP1AQ9BQG0 1328 aaKnown RBP14.56□□□□□ -0.08
MRPS28-208ENST00000521605 COL5A3P25940 1745 aaPredicted RBP14.55□□□□□ -0.08
MRPS28-208ENST00000521605 PHKG2P15735 406 aa14.55□□□□□ -0.08
MRPS28-208ENST00000521605 FKBP8Q14318 412 aa14.55□□□□□ -0.08
MRPS28-208ENST00000521605 IFNL2Q8IZJ0 200 aa14.55□□□□□ -0.08
MRPS28-208ENST00000521605 EMILIN1Q9Y6C2 1016 aa14.55□□□□□ -0.08
MRPS28-208ENST00000521605 ZC3H4Q9UPT8 1303 aaKnown RBP14.55□□□□□ -0.08
MRPS28-208ENST00000521605 TIAM2Q8IVF5 1701 aa14.55□□□□□ -0.08
MRPS28-208ENST00000521605 LMNB1P20700 586 aa14.54□□□□□ -0.08
MRPS28-208ENST00000521605 RC3H1Q5TC82 1133 aaKnown RBP14.54□□□□□ -0.08
MRPS28-208ENST00000521605 CNTNAP4Q9C0A0 1308 aa14.54□□□□□ -0.08
MRPS28-208ENST00000521605 PANK3Q9H999 370 aa14.53□□□□□ -0.08
MRPS28-208ENST00000521605 KDM6AO15550 1401 aaPredicted RBP14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms