RNA–Protein interactions for RNA: ENST00000521214.5

SPIDR-213, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-213ENST00000521214 AATKQ6ZMQ8 1374 aa9.92□□□□□ -0.82
SPIDR-213ENST00000521214 COL3A1P02461 1466 aaPredicted RBP9.92□□□□□ -0.82
SPIDR-213ENST00000521214 ANP32BQ92688 251 aaKnown RBP9.91□□□□□ -0.82
SPIDR-213ENST00000521214 IGSF1Q8N6C5 1336 aa9.91□□□□□ -0.82
SPIDR-213ENST00000521214 SHPRHQ149N8 1683 aa9.91□□□□□ -0.82
SPIDR-213ENST00000521214 TRMT2AQ8IZ69 625 aaKnown RBP9.91□□□□□ -0.82
SPIDR-213ENST00000521214 PLCD3Q8N3E9 789 aa9.91□□□□□ -0.82
SPIDR-213ENST00000521214 LNPKQ9C0E8 428 aa9.91□□□□□ -0.82
SPIDR-213ENST00000521214 MEX3CQ5U5Q3 659 aaKnown RBP9.91□□□□□ -0.82
SPIDR-213ENST00000521214 IFT57Q9NWB7 429 aa9.91□□□□□ -0.82
SPIDR-213ENST00000521214 SMIM5Q71RC9 77 aa9.9□□□□□ -0.82
SPIDR-213ENST00000521214 CHPF2Q9P2E5 772 aa9.9□□□□□ -0.82
SPIDR-213ENST00000521214 CDK12Q9NYV4 1490 aaPredicted RBP9.9□□□□□ -0.82
SPIDR-213ENST00000521214 CCDC85AQ96PX6 553 aaPredicted RBP9.9□□□□□ -0.82
SPIDR-213ENST00000521214 ANKARQ7Z5J8 1434 aa9.9□□□□□ -0.82
SPIDR-213ENST00000521214 XRN1Q8IZH2 1706 aaKnown RBP9.9□□□□□ -0.82
SPIDR-213ENST00000521214 CABP4P57796 275 aa9.9□□□□□ -0.83
SPIDR-213ENST00000521214 TAF7Q15545 349 aaPredicted RBP9.9□□□□□ -0.83
SPIDR-213ENST00000521214 SLKQ9H2G2 1235 aaPredicted RBP9.9□□□□□ -0.83
SPIDR-213ENST00000521214 SSH2Q76I76 1423 aa9.9□□□□□ -0.83
SPIDR-213ENST00000521214 PROSER3Q2NL68 480 aa9.89□□□□□ -0.83
SPIDR-213ENST00000521214 PRDM4Q9UKN5 801 aa9.89□□□□□ -0.83
SPIDR-213ENST00000521214 PIK3C2AO00443 1686 aa9.89□□□□□ -0.83
SPIDR-213ENST00000521214 TTC5Q8N0Z6 440 aa9.89□□□□□ -0.83
SPIDR-213ENST00000521214 STRCP1A6NGW2 1772 aa9.89□□□□□ -0.83
SPIDR-213ENST00000521214 USP31Q70CQ4 1352 aa9.89□□□□□ -0.83
SPIDR-213ENST00000521214 IPO8O15397 1037 aaKnown RBP9.88□□□□□ -0.83
SPIDR-213ENST00000521214 CYP27B1O15528 508 aa9.88□□□□□ -0.83
SPIDR-213ENST00000521214 CCDC27Q2M243 656 aa9.88□□□□□ -0.83
SPIDR-213ENST00000521214 PEAK1Q9H792 1746 aa9.88□□□□□ -0.83
SPIDR-213ENST00000521214 TOM1O60784 492 aa9.88□□□□□ -0.83
SPIDR-213ENST00000521214 MS4A1P11836 297 aa9.88□□□□□ -0.83
SPIDR-213ENST00000521214 MVPQ14764 893 aaKnown RBP9.88□□□□□ -0.83
SPIDR-213ENST00000521214 FAM98CQ17RN3 349 aaKnown RBP9.88□□□□□ -0.83
SPIDR-213ENST00000521214 TSHZ3Q63HK5 1081 aa9.88□□□□□ -0.83
SPIDR-213ENST00000521214 MEIS3Q99687 375 aa9.88□□□□□ -0.83
SPIDR-213ENST00000521214 PHF23Q9BUL5 403 aaPredicted RBP9.88□□□□□ -0.83
SPIDR-213ENST00000521214 ANKRD45Q5TZF3 282 aa9.88□□□□□ -0.83
SPIDR-213ENST00000521214 KIAA1211Q6ZU35 1233 aa9.88□□□□□ -0.83
SPIDR-213ENST00000521214 SMARCA5O60264 1052 aaPredicted RBP9.87□□□□□ -0.83
SPIDR-213ENST00000521214 MRPL50Q8N5N7 158 aaKnown RBP9.87□□□□□ -0.83
SPIDR-213ENST00000521214 ATP5J2-PTCD1G3V325 749 aa9.87□□□□□ -0.83
SPIDR-213ENST00000521214 CHL1O00533 1208 aa9.87□□□□□ -0.83
SPIDR-213ENST00000521214 RNMTO43148 476 aaKnown RBP9.87□□□□□ -0.83
SPIDR-213ENST00000521214 MAP3K5Q99683 1374 aa9.87□□□□□ -0.83
SPIDR-213ENST00000521214 ESPNB1AK53 854 aa9.86□□□□□ -0.83
SPIDR-213ENST00000521214 ZNF496Q96IT1 587 aaPredicted RBP9.86□□□□□ -0.83
SPIDR-213ENST00000521214 CHMP3Q9Y3E7 222 aa9.86□□□□□ -0.83
SPIDR-213ENST00000521214 KNDC1Q76NI1 1749 aa9.86□□□□□ -0.83
SPIDR-213ENST00000521214 VGLL3A8MV65 326 aa9.86□□□□□ -0.83
SPIDR-213ENST00000521214 ZCRB1Q8TBF4 217 aaKnown RBP9.86□□□□□ -0.83
SPIDR-213ENST00000521214 RNF123Q5XPI4 1314 aa9.86□□□□□ -0.83
SPIDR-213ENST00000521214 PANK2Q9BZ23 570 aa9.86□□□□□ -0.83
SPIDR-213ENST00000521214 SPG7Q9UQ90 795 aa9.86□□□□□ -0.83
SPIDR-213ENST00000521214 USP16Q9Y5T5 823 aa9.86□□□□□ -0.83
SPIDR-213ENST00000521214 FMN2Q9NZ56 1722 aa9.86□□□□□ -0.83
SPIDR-213ENST00000521214 IQSEC2Q5JU85 1478 aa9.86□□□□□ -0.83
SPIDR-213ENST00000521214 PI4KAP2A4QPH2 592 aa9.85□□□□□ -0.83
SPIDR-213ENST00000521214 GTF2E1P29083 439 aaPredicted RBP9.85□□□□□ -0.83
SPIDR-213ENST00000521214 CWF19L2Q2TBE0 894 aaKnown RBP9.85□□□□□ -0.83
SPIDR-213ENST00000521214 PI4KAP1Q8N8J0 262 aa9.85□□□□□ -0.83
SPIDR-213ENST00000521214 MON2Q7Z3U7 1717 aa9.85□□□□□ -0.83
SPIDR-213ENST00000521214 FLIIQ13045 1269 aa9.85□□□□□ -0.83
SPIDR-213ENST00000521214 PXDNQ92626 1479 aa9.85□□□□□ -0.83
SPIDR-213ENST00000521214 TNS3Q68CZ2 1445 aa9.85□□□□□ -0.83
SPIDR-213ENST00000521214 MAPK8IP2Q13387 824 aaPredicted RBP9.85□□□□□ -0.83
SPIDR-213ENST00000521214 ZBTB3Q9H5J0 574 aa9.85□□□□□ -0.83
SPIDR-213ENST00000521214 PDZRN3Q9UPQ7 1066 aa9.85□□□□□ -0.83
SPIDR-213ENST00000521214 EXOC6BQ9Y2D4 811 aa9.85□□□□□ -0.83
SPIDR-213ENST00000521214 KIF16BQ96L93 1317 aa9.85□□□□□ -0.83
SPIDR-213ENST00000521214 AKAP4Q5JQC9 854 aa9.84□□□□□ -0.83
SPIDR-213ENST00000521214 IFNL2Q8IZJ0 200 aa9.84□□□□□ -0.83
SPIDR-213ENST00000521214 SPRYD3Q8NCJ5 442 aa9.84□□□□□ -0.83
SPIDR-213ENST00000521214 USP19O94966 1318 aa9.84□□□□□ -0.83
SPIDR-213ENST00000521214 ARHGEF10O15013 1369 aa9.84□□□□□ -0.83
SPIDR-213ENST00000521214 ZNF142P52746 1687 aaPredicted RBP9.84□□□□□ -0.83
SPIDR-213ENST00000521214 A1BGP04217 495 aa9.84□□□□□ -0.83
SPIDR-213ENST00000521214 IL2RBP14784 551 aa9.84□□□□□ -0.83
SPIDR-213ENST00000521214 AKAP12Q02952 1782 aa9.84□□□□□ -0.83
SPIDR-213ENST00000521214 IPO4Q8TEX9 1081 aaKnown RBP9.84□□□□□ -0.83
SPIDR-213ENST00000521214 ASAP1Q9ULH1 1129 aa9.84□□□□□ -0.83
SPIDR-213ENST00000521214 PHKG2P15735 406 aa9.83□□□□□ -0.84
SPIDR-213ENST00000521214 PDE3AQ14432 1141 aa9.83□□□□□ -0.84
SPIDR-213ENST00000521214 C16orf71Q8IYS4 520 aaPredicted RBP9.83□□□□□ -0.84
SPIDR-213ENST00000521214 SIL1Q9H173 461 aa9.83□□□□□ -0.84
SPIDR-213ENST00000521214 DDX19BQ9UMR2 479 aa9.83□□□□□ -0.84
SPIDR-213ENST00000521214 STRCQ7RTU9 1775 aa9.83□□□□□ -0.84
SPIDR-213ENST00000521214 ZNF853P0CG23 659 aa9.83□□□□□ -0.84
SPIDR-213ENST00000521214 XRCC6P12956 609 aaKnown RBP eCLIP9.83□□□□□ -0.84
SPIDR-213ENST00000521214 CCDC30Q5VVM6 783 aa9.83□□□□□ -0.84
SPIDR-213ENST00000521214 MAP7D2Q96T17 732 aa9.83□□□□□ -0.84
SPIDR-213ENST00000521214 RGPD2P0DJD1 1756 aa9.83□□□□□ -0.84
SPIDR-213ENST00000521214 HSPA1LP34931 641 aa9.83□□□□□ -0.84
SPIDR-213ENST00000521214 RIC3Q7Z5B4 369 aa9.83□□□□□ -0.84
SPIDR-213ENST00000521214 ADGRB2O60241 1585 aa9.82□□□□□ -0.84
SPIDR-213ENST00000521214 PRIM1P49642 420 aaKnown RBP9.82□□□□□ -0.84
SPIDR-213ENST00000521214 OS9Q13438 667 aaPredicted RBP9.82□□□□□ -0.84
SPIDR-213ENST00000521214 IL1RAPL2Q9NP60 686 aa9.82□□□□□ -0.84
SPIDR-213ENST00000521214 SOS2Q07890 1332 aaPredicted RBP9.82□□□□□ -0.84
SPIDR-213ENST00000521214 BECN1Q14457 450 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms