RNA–Protein interactions for RNA: ENST00000521150.1

SLIT3-208, Transcript of slit guidance ligand 3, human

TSL 2

Gene SLIT3, Length 987 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLIT3-208	ENST00000521150	IGSF1	Q8N6C5	1336 aa		28.04	■■■□□ 2.08
SLIT3-208	ENST00000521150	ERVV-2	B6SEH9	535 aa		28.04	■■■□□ 2.08
SLIT3-208	ENST00000521150	GNPAT	O15228	680 aa		28.04	■■■□□ 2.08
SLIT3-208	ENST00000521150	HSP90AB1	P08238	724 aa	Known RBP	28.02	■■■□□ 2.08
SLIT3-208	ENST00000521150	HSPA5	P11021	654 aa	Known RBP	28.02	■■■□□ 2.08
SLIT3-208	ENST00000521150	PLEKHO1	Q53GL0	409 aa	Predicted RBP	28.02	■■■□□ 2.08
SLIT3-208	ENST00000521150	DCAF5	Q96JK2	942 aa		28.01	■■■□□ 2.07
SLIT3-208	ENST00000521150	AMOT	Q4VCS5	1084 aa		27.98	■■■□□ 2.07
SLIT3-208	ENST00000521150	TRAPPC3L	Q5T215	181 aa		27.98	■■■□□ 2.07
SLIT3-208	ENST00000521150	RTCB	Q9Y3I0	505 aa	Known RBP	27.97	■■■□□ 2.07
SLIT3-208	ENST00000521150	ATP10D	Q9P241	1426 aa		27.96	■■■□□ 2.07
SLIT3-208	ENST00000521150	RC3H1	Q5TC82	1133 aa	Known RBP	27.96	■■■□□ 2.07
SLIT3-208	ENST00000521150	SLC4A9	Q96Q91	983 aa		27.96	■■■□□ 2.07
SLIT3-208	ENST00000521150	RBM42	Q9BTD8	480 aa	Known RBP	27.96	■■■□□ 2.07
SLIT3-208	ENST00000521150	KDR	P35968	1356 aa		27.96	■■■□□ 2.07
SLIT3-208	ENST00000521150	MORC1	Q86VD1	984 aa		27.95	■■■□□ 2.06
SLIT3-208	ENST00000521150	MMP10	P09238	476 aa		27.94	■■■□□ 2.06
SLIT3-208	ENST00000521150	CABP4	P57796	275 aa		27.94	■■■□□ 2.06
SLIT3-208	ENST00000521150	ZNF530	Q6P9A1	599 aa	Predicted RBP	27.94	■■■□□ 2.06
SLIT3-208	ENST00000521150	NLGN1	Q8N2Q7	840 aa		27.94	■■■□□ 2.06
SLIT3-208	ENST00000521150	GPBP1L1	Q9HC44	474 aa	Predicted RBP	27.93	■■■□□ 2.06
SLIT3-208	ENST00000521150	ADRA2B	P18089	450 aa		27.92	■■■□□ 2.06
SLIT3-208	ENST00000521150	WWC3	Q9ULE0	1092 aa		27.92	■■■□□ 2.06
SLIT3-208	ENST00000521150	MTHFS	P49914	203 aa		27.91	■■■□□ 2.06
SLIT3-208	ENST00000521150	ARHGEF1	Q92888	912 aa	Known RBP	27.91	■■■□□ 2.06
SLIT3-208	ENST00000521150	ADCY9	O60503	1353 aa		27.9	■■■□□ 2.06
SLIT3-208	ENST00000521150	RPS6KA4	O75676	772 aa		27.9	■■■□□ 2.06
SLIT3-208	ENST00000521150	ZNF831	Q5JPB2	1677 aa		27.9	■■■□□ 2.06
SLIT3-208	ENST00000521150	CNTNAP4	Q9C0A0	1308 aa		27.9	■■■□□ 2.06
SLIT3-208	ENST00000521150	TGFB2	P61812	414 aa		27.89	■■■□□ 2.06
SLIT3-208	ENST00000521150	C1orf141	Q5JVX7	400 aa		27.89	■■■□□ 2.06
SLIT3-208	ENST00000521150	AEBP1	Q8IUX7	1158 aa		27.89	■■■□□ 2.06
SLIT3-208	ENST00000521150	KNSTRN	Q9Y448	316 aa		27.89	■■■□□ 2.06
SLIT3-208	ENST00000521150	KDM6A	O15550	1401 aa	Predicted RBP	27.89	■■■□□ 2.06
SLIT3-208	ENST00000521150	RFC4	P35249	363 aa		27.87	■■■□□ 2.05
SLIT3-208	ENST00000521150	SULT6B1	Q6IMI4	303 aa		27.87	■■■□□ 2.05
SLIT3-208	ENST00000521150	NFATC2IP	Q8NCF5	419 aa		27.86	■■■□□ 2.05
SLIT3-208	ENST00000521150	GYS1	P13807	737 aa		27.85	■■■□□ 2.05
SLIT3-208	ENST00000521150	IL13	P35225	146 aa		27.85	■■■□□ 2.05
SLIT3-208	ENST00000521150	PTCD1	O75127	700 aa	Known RBP	27.84	■■■□□ 2.05
SLIT3-208	ENST00000521150	ZNF526	Q8TF50	670 aa	Predicted RBP	27.84	■■■□□ 2.05
SLIT3-208	ENST00000521150	CCER1	Q8TC90	406 aa	Predicted RBP	27.83	■■■□□ 2.05
SLIT3-208	ENST00000521150	CCDC87	Q9NVE4	849 aa		27.83	■■■□□ 2.05
SLIT3-208	ENST00000521150		A0A0G2JLW4	131 aa		27.82	■■■□□ 2.04
SLIT3-208	ENST00000521150	PARP3	Q9Y6F1	533 aa		27.82	■■■□□ 2.04
SLIT3-208	ENST00000521150	PXDNL	A1KZ92	1463 aa		27.82	■■■□□ 2.04
SLIT3-208	ENST00000521150	COL5A3	P25940	1745 aa	Predicted RBP	27.81	■■■□□ 2.04
SLIT3-208	ENST00000521150	KIF13B	Q9NQT8	1826 aa		27.81	■■■□□ 2.04
SLIT3-208	ENST00000521150	CIC	Q96RK0	1608 aa	Predicted RBP	27.8	■■■□□ 2.04
SLIT3-208	ENST00000521150	CRKL	P46109	303 aa	Known RBP	27.79	■■■□□ 2.04
SLIT3-208	ENST00000521150	BCS1L	Q9Y276	419 aa		27.79	■■■□□ 2.04
SLIT3-208	ENST00000521150	C10orf71	Q711Q0	1435 aa		27.78	■■■□□ 2.04
SLIT3-208	ENST00000521150	AKAP4	Q5JQC9	854 aa		27.78	■■■□□ 2.04
SLIT3-208	ENST00000521150	AMER1	Q5JTC6	1135 aa	Predicted RBP	27.78	■■■□□ 2.04
SLIT3-208	ENST00000521150	MYH14	Q7Z406	1995 aa	Known RBP	27.78	■■■□□ 2.04
SLIT3-208	ENST00000521150	DPEP1	P16444	411 aa		27.77	■■■□□ 2.04
SLIT3-208	ENST00000521150	N4BP2	Q86UW6	1770 aa	Predicted RBP	27.75	■■■□□ 2.03
SLIT3-208	ENST00000521150	C4A	P0C0L4	1744 aa		27.75	■■■□□ 2.03
SLIT3-208	ENST00000521150	KIAA1551	Q9HCM1	1747 aa		27.75	■■■□□ 2.03
SLIT3-208	ENST00000521150	HSPA6	P17066	643 aa		27.74	■■■□□ 2.03
SLIT3-208	ENST00000521150	KIF3C	O14782	793 aa		27.73	■■■□□ 2.03
SLIT3-208	ENST00000521150	FCHSD2	O94868	740 aa		27.73	■■■□□ 2.03
SLIT3-208	ENST00000521150	INTS5	Q6P9B9	1019 aa	Known RBP	27.73	■■■□□ 2.03
SLIT3-208	ENST00000521150	ARHGAP27	Q6ZUM4	889 aa		27.73	■■■□□ 2.03
SLIT3-208	ENST00000521150	SLC52A2	Q9HAB3	445 aa		27.73	■■■□□ 2.03
SLIT3-208	ENST00000521150	SRP68	Q9UHB9	627 aa	Known RBP	27.73	■■■□□ 2.03
SLIT3-208	ENST00000521150	USP42	Q9H9J4	1324 aa	Known RBP	27.72	■■■□□ 2.03
SLIT3-208	ENST00000521150	KCNA3	P22001	575 aa		27.72	■■■□□ 2.03
SLIT3-208	ENST00000521150	FKBP8	Q14318	412 aa		27.72	■■■□□ 2.03
SLIT3-208	ENST00000521150	LGR6	Q9HBX8	967 aa		27.72	■■■□□ 2.03
SLIT3-208	ENST00000521150	SCN11A	Q9UI33	1791 aa		27.7	■■■□□ 2.02
SLIT3-208	ENST00000521150	KIF7	Q2M1P5	1343 aa		27.69	■■■□□ 2.02
SLIT3-208	ENST00000521150	PIM2	Q9P1W9	311 aa		27.69	■■■□□ 2.02
SLIT3-208	ENST00000521150	PER1	O15534	1290 aa	Predicted RBP	27.68	■■■□□ 2.02
SLIT3-208	ENST00000521150	RNMT	O43148	476 aa	Known RBP	27.68	■■■□□ 2.02
SLIT3-208	ENST00000521150	HMOX1	P09601	288 aa		27.68	■■■□□ 2.02
SLIT3-208	ENST00000521150	DNAJC10	Q8IXB1	793 aa		27.68	■■■□□ 2.02
SLIT3-208	ENST00000521150	TM4SF1	P30408	202 aa		27.67	■■■□□ 2.02
SLIT3-208	ENST00000521150	DDR1	Q08345	913 aa		27.67	■■■□□ 2.02
SLIT3-208	ENST00000521150	TJP1	Q07157	1748 aa		27.67	■■■□□ 2.02
SLIT3-208	ENST00000521150	ZPR1	O75312	459 aa		27.66	■■■□□ 2.02
SLIT3-208	ENST00000521150	DIAPH1	O60610	1272 aa	Known RBP	27.64	■■■□□ 2.02
SLIT3-208	ENST00000521150	CYP19A1	P11511	503 aa	Predicted RBP	27.64	■■■□□ 2.02
SLIT3-208	ENST00000521150	SLC39A6	Q13433	755 aa		27.64	■■■□□ 2.02
SLIT3-208	ENST00000521150	MTHFSD	Q2M296	383 aa	Known RBP	27.64	■■■□□ 2.02
SLIT3-208	ENST00000521150	DALRD3	Q5D0E6	543 aa	Known RBP	27.64	■■■□□ 2.02
SLIT3-208	ENST00000521150	POLRMT	O00411	1230 aa	Known RBP	27.63	■■■□□ 2.01
SLIT3-208	ENST00000521150	BRCA1	P38398	1863 aa	Known RBP	27.63	■■■□□ 2.01
SLIT3-208	ENST00000521150	SOS1	Q07889	1333 aa	Predicted RBP	27.63	■■■□□ 2.01
SLIT3-208	ENST00000521150	USPL1	Q5W0Q7	1092 aa		27.62	■■■□□ 2.01
SLIT3-208	ENST00000521150	CEP350	Q5VT06	3117 aa		27.62	■■■□□ 2.01
SLIT3-208	ENST00000521150	TOMM70	O94826	608 aa		27.61	■■■□□ 2.01
SLIT3-208	ENST00000521150	CC2D1B	Q5T0F9	858 aa	Known RBP	27.61	■■■□□ 2.01
SLIT3-208	ENST00000521150	VSIG10	Q8N0Z9	540 aa		27.61	■■■□□ 2.01
SLIT3-208	ENST00000521150	MRC1	P22897	1456 aa		27.6	■■■□□ 2.01
SLIT3-208	ENST00000521150	C9orf131	Q5VYM1	1079 aa		27.6	■■■□□ 2.01
SLIT3-208	ENST00000521150	NARF	Q9UHQ1	456 aa		27.6	■■■□□ 2.01
SLIT3-208	ENST00000521150	ADAMTS7	Q9UKP4	1686 aa		27.59	■■■□□ 2.01
SLIT3-208	ENST00000521150	CHRNA5	P30532	468 aa		27.59	■■■□□ 2.01
SLIT3-208	ENST00000521150	ARFGEF1	Q9Y6D6	1849 aa		27.57	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms