RNA–Protein interactions for RNA: ENST00000521122.1

PVT1-210, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 221 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-210ENST00000521122 LTBP1Q14766 1721 aa13.13□□□□□ -0.31
PVT1-210ENST00000521122 DPY19L2Q6NUT2 758 aa13.12□□□□□ -0.31
PVT1-210ENST00000521122 SLC17A8Q8NDX2 589 aa13.12□□□□□ -0.31
PVT1-210ENST00000521122 ITGBL1O95965 494 aaPredicted RBP13.11□□□□□ -0.31
PVT1-210ENST00000521122 SLC4A1APQ9BWU0 796 aaKnown RBP13.11□□□□□ -0.31
PVT1-210ENST00000521122 ADAMTS7Q9UKP4 1686 aa13.1□□□□□ -0.31
PVT1-210ENST00000521122 PALLDQ8WX93 1383 aa13.09□□□□□ -0.31
PVT1-210ENST00000521122 SOX12O15370 315 aa13.09□□□□□ -0.31
PVT1-210ENST00000521122 LDHDQ86WU2 507 aa13.09□□□□□ -0.31
PVT1-210ENST00000521122 NFAT5O94916 1531 aa13.08□□□□□ -0.31
PVT1-210ENST00000521122 C4AP0C0L4 1744 aa13.08□□□□□ -0.32
PVT1-210ENST00000521122 CA12O43570 354 aa13.08□□□□□ -0.32
PVT1-210ENST00000521122 ITGAEP38570 1179 aa13.08□□□□□ -0.32
PVT1-210ENST00000521122 COL6A3P12111 3177 aa13.07□□□□□ -0.32
PVT1-210ENST00000521122 NLGN1Q8N2Q7 840 aa13.07□□□□□ -0.32
PVT1-210ENST00000521122 CCDC88AQ3V6T2 1871 aa13.06□□□□□ -0.32
PVT1-210ENST00000521122 ECE1P42892 770 aa13.06□□□□□ -0.32
PVT1-210ENST00000521122 CAPNS2Q96L46 248 aa13.06□□□□□ -0.32
PVT1-210ENST00000521122 GPR101Q96P66 508 aaPredicted RBP13.06□□□□□ -0.32
PVT1-210ENST00000521122 ABT1Q9ULW3 272 aaKnown RBP13.06□□□□□ -0.32
PVT1-210ENST00000521122 TMF1P82094 1093 aa13.05□□□□□ -0.32
PVT1-210ENST00000521122 MKI67P46013 3256 aaKnown RBP13.05□□□□□ -0.32
PVT1-210ENST00000521122 PARP3Q9Y6F1 533 aa13.04□□□□□ -0.32
PVT1-210ENST00000521122 ANKRD24Q8TF21 1146 aa13.03□□□□□ -0.32
PVT1-210ENST00000521122 GNPATO15228 680 aa13.02□□□□□ -0.33
PVT1-210ENST00000521122 CHRNA5P30532 468 aa13.02□□□□□ -0.33
PVT1-210ENST00000521122 MAP2K2P36507 400 aa13.02□□□□□ -0.33
PVT1-210ENST00000521122 IQCA1LA6NCM1 817 aa13.01□□□□□ -0.33
PVT1-210ENST00000521122 CYP4F22Q6NT55 531 aa13.01□□□□□ -0.33
PVT1-210ENST00000521122 PAXIP1Q6ZW49 1069 aaPredicted RBP13.01□□□□□ -0.33
PVT1-210ENST00000521122 LINC00116Q8NCU8 138 aa13.01□□□□□ -0.33
PVT1-210ENST00000521122 ZCRB1Q8TBF4 217 aaKnown RBP13□□□□□ -0.33
PVT1-210ENST00000521122 SMARCC1Q92922 1105 aaPredicted RBP13□□□□□ -0.33
PVT1-210ENST00000521122 TAF1DQ9H5J8 278 aaPredicted RBP13□□□□□ -0.33
PVT1-210ENST00000521122 TRIOBPQ9H2D6 2365 aa13□□□□□ -0.33
PVT1-210ENST00000521122 NFKBIEO00221 500 aa12.99□□□□□ -0.33
PVT1-210ENST00000521122 DDNO94850 711 aaPredicted RBP12.99□□□□□ -0.33
PVT1-210ENST00000521122 GRM1Q13255 1194 aa12.99□□□□□ -0.33
PVT1-210ENST00000521122 DICER1Q9UPY3 1922 aaKnown RBP12.99□□□□□ -0.33
PVT1-210ENST00000521122 SCN4AP35499 1836 aa12.99□□□□□ -0.33
PVT1-210ENST00000521122 AOC2O75106 756 aa12.97□□□□□ -0.33
PVT1-210ENST00000521122 GYS1P13807 737 aa12.97□□□□□ -0.33
PVT1-210ENST00000521122 ERFEQ4G0M1 354 aa12.97□□□□□ -0.33
PVT1-210ENST00000521122 CABP1Q9NZU7 370 aa12.97□□□□□ -0.33
PVT1-210ENST00000521122 MAP2P11137 1827 aaKnown RBP12.97□□□□□ -0.33
PVT1-210ENST00000521122 ADAMTSL1Q8N6G6 1762 aa12.97□□□□□ -0.33
PVT1-210ENST00000521122 TTC21BQ7Z4L5 1316 aa12.96□□□□□ -0.33
PVT1-210ENST00000521122 MNX1P50219 401 aaPredicted RBP12.96□□□□□ -0.33
PVT1-210ENST00000521122 BRPF1P55201 1214 aaPredicted RBP12.96□□□□□ -0.33
PVT1-210ENST00000521122 SRPK2P78362 688 aaKnown RBP12.96□□□□□ -0.33
PVT1-210ENST00000521122 NBPF1Q3BBV0 1214 aa12.96□□□□□ -0.33
PVT1-210ENST00000521122 TRAPPC3LQ5T215 181 aa12.96□□□□□ -0.33
PVT1-210ENST00000521122 CNTROBQ8N137 903 aa12.96□□□□□ -0.33
PVT1-210ENST00000521122 L3MBTL3Q96JM7 780 aaPredicted RBP12.96□□□□□ -0.33
PVT1-210ENST00000521122 MEGF6O75095 1541 aa12.95□□□□□ -0.34
PVT1-210ENST00000521122 EAPPQ56P03 285 aaPredicted RBP12.95□□□□□ -0.34
PVT1-210ENST00000521122 MPRIPQ6WCQ1 1025 aa12.95□□□□□ -0.34
PVT1-210ENST00000521122 DDX21Q9NR30 783 aaKnown RBP eCLIP12.95□□□□□ -0.34
PVT1-210ENST00000521122 CLEC11AQ9Y240 323 aa12.95□□□□□ -0.34
PVT1-210ENST00000521122 LTN1O94822 1766 aa12.94□□□□□ -0.34
PVT1-210ENST00000521122 FAM208AQ9UK61 1670 aaKnown RBP12.94□□□□□ -0.34
PVT1-210ENST00000521122 LOC102724428A0A0B4J2F2 783 aa12.94□□□□□ -0.34
PVT1-210ENST00000521122 SIK1P57059 783 aa12.94□□□□□ -0.34
PVT1-210ENST00000521122 TTC21AQ8NDW8 1320 aa12.93□□□□□ -0.34
PVT1-210ENST00000521122 MAP1SQ66K74 1059 aaPredicted RBP12.93□□□□□ -0.34
PVT1-210ENST00000521122 CABP2Q9NPB3 220 aa12.93□□□□□ -0.34
PVT1-210ENST00000521122 ITPK1Q13572 414 aa12.92□□□□□ -0.34
PVT1-210ENST00000521122 ARHGEF1Q92888 912 aaKnown RBP12.92□□□□□ -0.34
PVT1-210ENST00000521122 RTCBQ9Y3I0 505 aaKnown RBP12.92□□□□□ -0.34
PVT1-210ENST00000521122 ADRA2BP18089 450 aa12.91□□□□□ -0.34
PVT1-210ENST00000521122 TLL2Q9Y6L7 1015 aa12.91□□□□□ -0.34
PVT1-210ENST00000521122 CEP290O15078 2479 aa12.9□□□□□ -0.34
PVT1-210ENST00000521122 TTLL6Q8N841 843 aa12.9□□□□□ -0.34
PVT1-210ENST00000521122 HPS5Q9UPZ3 1129 aa12.9□□□□□ -0.34
PVT1-210ENST00000521122 UNC80Q8N2C7 3258 aa12.89□□□□□ -0.35
PVT1-210ENST00000521122 RFC4P35249 363 aa12.89□□□□□ -0.35
PVT1-210ENST00000521122 DDR1Q08345 913 aa12.89□□□□□ -0.35
PVT1-210ENST00000521122 CIAPIN1Q6FI81 312 aa12.89□□□□□ -0.35
PVT1-210ENST00000521122 PNMA8AQ86V59 439 aaPredicted RBP12.89□□□□□ -0.35
PVT1-210ENST00000521122 ITGB4P16144 1822 aa12.89□□□□□ -0.35
PVT1-210ENST00000521122 DLEC1Q9Y238 1755 aa12.89□□□□□ -0.35
PVT1-210ENST00000521122 RANBP2P49792 3224 aaKnown RBP12.88□□□□□ -0.35
PVT1-210ENST00000521122 ZNF692Q9BU19 519 aaPredicted RBP12.88□□□□□ -0.35
PVT1-210ENST00000521122 HACL1Q9UJ83 578 aa12.88□□□□□ -0.35
PVT1-210ENST00000521122 COLQQ9Y215 455 aaPredicted RBP12.88□□□□□ -0.35
PVT1-210ENST00000521122 EPHX2P34913 555 aa12.87□□□□□ -0.35
PVT1-210ENST00000521122 ATP6V1AP38606 617 aa12.87□□□□□ -0.35
PVT1-210ENST00000521122 CTU1Q7Z7A3 348 aaKnown RBP12.87□□□□□ -0.35
PVT1-210ENST00000521122 PIGBQ92521 554 aa12.87□□□□□ -0.35
PVT1-210ENST00000521122 FER1L6Q2WGJ9 1857 aa12.87□□□□□ -0.35
PVT1-210ENST00000521122 CGNL1Q0VF96 1302 aa12.87□□□□□ -0.35
PVT1-210ENST00000521122 USP31Q70CQ4 1352 aa12.86□□□□□ -0.35
PVT1-210ENST00000521122 CST9Q5W186 159 aa12.86□□□□□ -0.35
PVT1-210ENST00000521122 MPNDQ8N594 471 aa12.86□□□□□ -0.35
PVT1-210ENST00000521122 TRPM7Q96QT4 1865 aa12.86□□□□□ -0.35
PVT1-210ENST00000521122 SMG6Q86US8 1419 aaKnown RBP12.86□□□□□ -0.35
PVT1-210ENST00000521122 LTBP3Q9NS15 1303 aa12.86□□□□□ -0.35
PVT1-210ENST00000521122 FMR1Q06787 632 aaKnown RBP eCLIP12.85□□□□□ -0.35
PVT1-210ENST00000521122 LTV1Q96GA3 475 aaPredicted RBP12.85□□□□□ -0.35
PVT1-210ENST00000521122 POLRMTO00411 1230 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms