RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 CTTNBP2Q8WZ74 1663 aa6.9□□□□□ -1.3
VPS13B-208ENST00000521037 UPP2O95045 317 aa6.9□□□□□ -1.3
VPS13B-208ENST00000521037 GDF11O95390 407 aa6.9□□□□□ -1.3
VPS13B-208ENST00000521037 FSHRP23945 695 aa6.9□□□□□ -1.3
VPS13B-208ENST00000521037 AGERQ15109 404 aa6.9□□□□□ -1.3
VPS13B-208ENST00000521037 ZNF385CQ66K41 422 aaPredicted RBP6.9□□□□□ -1.3
VPS13B-208ENST00000521037 ARMC2Q8NEN0 867 aa6.9□□□□□ -1.3
VPS13B-208ENST00000521037 EMILIN1Q9Y6C2 1016 aa6.9□□□□□ -1.3
VPS13B-208ENST00000521037 PLCH2O75038 1416 aa6.9□□□□□ -1.31
VPS13B-208ENST00000521037 CPS1P31327 1500 aa6.9□□□□□ -1.31
VPS13B-208ENST00000521037 SAMD9Q5K651 1589 aa6.9□□□□□ -1.31
VPS13B-208ENST00000521037 CFAP74Q9C0B2 1584 aa6.9□□□□□ -1.31
VPS13B-208ENST00000521037 RAPGEF6Q8TEU7 1601 aa6.9□□□□□ -1.31
VPS13B-208ENST00000521037 SLC35F4A4IF30 521 aa6.89□□□□□ -1.31
VPS13B-208ENST00000521037 TTLL8A6PVC2 850 aa6.89□□□□□ -1.31
VPS13B-208ENST00000521037 SPINT1O43278 529 aa6.89□□□□□ -1.31
VPS13B-208ENST00000521037 ARHGEF15O94989 841 aa6.89□□□□□ -1.31
VPS13B-208ENST00000521037 SLURP2P0DP57 97 aa6.89□□□□□ -1.31
VPS13B-208ENST00000521037 RTL5Q5HYW3 569 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-208ENST00000521037 MYSM1Q5VVJ2 828 aa6.89□□□□□ -1.31
VPS13B-208ENST00000521037 COL25A1Q9BXS0 654 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-208ENST00000521037 STRCP1A6NGW2 1772 aa6.89□□□□□ -1.31
VPS13B-208ENST00000521037 MYO3AQ8NEV4 1616 aa6.88□□□□□ -1.31
VPS13B-208ENST00000521037 PRXQ9BXM0 1461 aa6.88□□□□□ -1.31
VPS13B-208ENST00000521037 PTPRKQ15262 1439 aa6.88□□□□□ -1.31
VPS13B-208ENST00000521037 TOM1O60784 492 aa6.88□□□□□ -1.31
VPS13B-208ENST00000521037 CBLBQ13191 982 aa6.88□□□□□ -1.31
VPS13B-208ENST00000521037 ERFEQ4G0M1 354 aa6.88□□□□□ -1.31
VPS13B-208ENST00000521037 VASH1Q7L8A9 365 aaPredicted RBP6.88□□□□□ -1.31
VPS13B-208ENST00000521037 CCDC116Q8IYX3 515 aa6.88□□□□□ -1.31
VPS13B-208ENST00000521037 CCDC155Q8N6L0 562 aa6.88□□□□□ -1.31
VPS13B-208ENST00000521037 WHAMMQ8TF30 809 aa6.88□□□□□ -1.31
VPS13B-208ENST00000521037 CEP170BQ9Y4F5 1589 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-208ENST00000521037 FIGNL2A6NMB9 653 aa6.87□□□□□ -1.31
VPS13B-208ENST00000521037 PPP1R26Q5T8A7 1209 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-208ENST00000521037 AFAP1Q8N556 730 aa6.87□□□□□ -1.31
VPS13B-208ENST00000521037 LRRC7Q96NW7 1537 aa6.86□□□□□ -1.31
VPS13B-208ENST00000521037 MLH3Q9UHC1 1453 aa6.86□□□□□ -1.31
VPS13B-208ENST00000521037 CSPP1Q1MSJ5 1256 aa6.86□□□□□ -1.31
VPS13B-208ENST00000521037 NBPF14Q5TI25 921 aa6.86□□□□□ -1.31
VPS13B-208ENST00000521037 MROH2AA6NES4 1674 aa6.86□□□□□ -1.31
VPS13B-208ENST00000521037 DNMT1P26358 1616 aaKnown RBP6.86□□□□□ -1.31
VPS13B-208ENST00000521037 ZMYM3Q14202 1370 aa6.85□□□□□ -1.31
VPS13B-208ENST00000521037 GPKOWQ92917 476 aaPredicted RBP eCLIP6.85□□□□□ -1.31
VPS13B-208ENST00000521037 MAGEB6P1A0A0J9YX57 407 aa6.84□□□□□ -1.31
VPS13B-208ENST00000521037 PRKCSHP14314 528 aaPredicted RBP6.84□□□□□ -1.31
VPS13B-208ENST00000521037 AK7Q96M32 723 aa6.84□□□□□ -1.31
VPS13B-208ENST00000521037 OCSTAMPQ9BR26 566 aa6.84□□□□□ -1.31
VPS13B-208ENST00000521037 ZNF518AQ6AHZ1 1483 aa6.84□□□□□ -1.31
VPS13B-208ENST00000521037 CNTLNQ9NXG0 1405 aa6.84□□□□□ -1.32
VPS13B-208ENST00000521037 SENP3-EIF4A1A0A087X0R7 540 aa6.83□□□□□ -1.32
VPS13B-208ENST00000521037 NUTM2BA6NNL0 878 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-208ENST00000521037 NUTM2EB1AL46 878 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-208ENST00000521037 ITGA6P23229 1130 aa6.83□□□□□ -1.32
VPS13B-208ENST00000521037 CTSOP43234 321 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-208ENST00000521037 NUTM2DQ5VT03 806 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-208ENST00000521037 NUTM2AQ8IVF1 878 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-208ENST00000521037 VWA5B2Q8N398 1253 aa6.83□□□□□ -1.32
VPS13B-208ENST00000521037 MED14O60244 1454 aa6.83□□□□□ -1.32
VPS13B-208ENST00000521037 KIDINS220Q9ULH0 1771 aa6.82□□□□□ -1.32
VPS13B-208ENST00000521037 CTDSPL2Q05D32 466 aa6.82□□□□□ -1.32
VPS13B-208ENST00000521037 PDXDC2PQ6P474 469 aa6.82□□□□□ -1.32
VPS13B-208ENST00000521037 TSC1Q92574 1164 aa6.82□□□□□ -1.32
VPS13B-208ENST00000521037 A2ML1A8K2U0 1454 aa6.81□□□□□ -1.32
VPS13B-208ENST00000521037 RNF17Q9BXT8 1623 aaKnown RBP6.81□□□□□ -1.32
VPS13B-208ENST00000521037 RNF225M0QZC1 329 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-208ENST00000521037 FBXO31Q5XUX0 539 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-208ENST00000521037 KDF1Q8NAX2 398 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-208ENST00000521037 KCTD15Q96SI1 283 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-208ENST00000521037 CARD14Q9BXL6 1004 aa6.81□□□□□ -1.32
VPS13B-208ENST00000521037 PGPEP1Q9NXJ5 209 aa6.81□□□□□ -1.32
VPS13B-208ENST00000521037 EP400Q96L91 3159 aa6.81□□□□□ -1.32
VPS13B-208ENST00000521037 XIRP1Q702N8 1843 aaKnown RBP6.8□□□□□ -1.32
VPS13B-208ENST00000521037 HELBQ8NG08 1087 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-208ENST00000521037 AGBL1Q96MI9 1066 aa6.8□□□□□ -1.32
VPS13B-208ENST00000521037 DNMT3AQ9Y6K1 912 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-208ENST00000521037 CDK13Q14004 1512 aaKnown RBP6.8□□□□□ -1.32
VPS13B-208ENST00000521037 LRP6O75581 1613 aa6.79□□□□□ -1.32
VPS13B-208ENST00000521037 KIF14Q15058 1648 aa6.79□□□□□ -1.32
VPS13B-208ENST00000521037 POLR1AO95602 1720 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-208ENST00000521037 PLXNC1O60486 1568 aa6.79□□□□□ -1.32
VPS13B-208ENST00000521037 SETBP1Q9Y6X0 1596 aa6.79□□□□□ -1.32
VPS13B-208ENST00000521037 FAM135BQ49AJ0 1406 aa6.79□□□□□ -1.32
VPS13B-208ENST00000521037 PLEKHD1A6NEE1 506 aa6.79□□□□□ -1.32
VPS13B-208ENST00000521037 IRS1P35568 1242 aa6.79□□□□□ -1.32
VPS13B-208ENST00000521037 PDE4DQ08499 809 aa6.79□□□□□ -1.32
VPS13B-208ENST00000521037 INTS6LQ5JSJ4 861 aaKnown RBP6.79□□□□□ -1.32
VPS13B-208ENST00000521037 SV2AQ7L0J3 742 aa6.79□□□□□ -1.32
VPS13B-208ENST00000521037 SVOPQ8N4V2 548 aa6.79□□□□□ -1.32
VPS13B-208ENST00000521037 RNF217Q8TC41 542 aa6.79□□□□□ -1.32
VPS13B-208ENST00000521037 INSM2Q96T92 566 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-208ENST00000521037 SUPT5HO00267 1087 aaKnown RBP6.78□□□□□ -1.32
VPS13B-208ENST00000521037 CLK2P49760 499 aaKnown RBP6.78□□□□□ -1.32
VPS13B-208ENST00000521037 GAS6Q14393 721 aa6.78□□□□□ -1.32
VPS13B-208ENST00000521037 LYPD4Q6UWN0 246 aa6.78□□□□□ -1.32
VPS13B-208ENST00000521037 CDV3Q9UKY7 258 aaKnown RBP6.78□□□□□ -1.32
VPS13B-208ENST00000521037 CLTCQ00610 1675 aaKnown RBP6.77□□□□□ -1.32
VPS13B-208ENST00000521037 ABCC1P33527 1531 aa6.77□□□□□ -1.33
VPS13B-208ENST00000521037 DEPDC5O75140 1603 aa6.77□□□□□ -1.33
VPS13B-208ENST00000521037 LILRA1O75019 489 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms