RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 IL13P35225 146 aa14.58□□□□□ -0.08
PVT1-209ENST00000520913 SULT6B1Q6IMI4 303 aa14.58□□□□□ -0.08
PVT1-209ENST00000520913 FLAD1Q8NFF5 587 aa14.58□□□□□ -0.08
PVT1-209ENST00000520913 DCAF5Q96JK2 942 aa14.58□□□□□ -0.08
PVT1-209ENST00000520913 SIPA1L3O60292 1781 aaPredicted RBP14.57□□□□□ -0.08
PVT1-209ENST00000520913 UBR2Q8IWV8 1755 aa14.57□□□□□ -0.08
PVT1-209ENST00000520913 MYH14Q7Z406 1995 aaKnown RBP14.57□□□□□ -0.08
PVT1-209ENST00000520913 LOC102724428A0A0B4J2F2 783 aa14.57□□□□□ -0.08
PVT1-209ENST00000520913 ERVV-2B6SEH9 535 aa14.57□□□□□ -0.08
PVT1-209ENST00000520913 SIK1P57059 783 aa14.57□□□□□ -0.08
PVT1-209ENST00000520913 C1orf141Q5JVX7 400 aa14.57□□□□□ -0.08
PVT1-209ENST00000520913 CC2D1BQ5T0F9 858 aaKnown RBP14.57□□□□□ -0.08
PVT1-209ENST00000520913 COL23A1Q86Y22 540 aaPredicted RBP14.57□□□□□ -0.08
PVT1-209ENST00000520913 MTHFSP49914 203 aa14.56□□□□□ -0.08
PVT1-209ENST00000520913 ASAP1Q9ULH1 1129 aa14.56□□□□□ -0.08
PVT1-209ENST00000520913 KIF13BQ9NQT8 1826 aa14.56□□□□□ -0.08
PVT1-209ENST00000520913 YY1P25490 414 aa14.54□□□□□ -0.08
PVT1-209ENST00000520913 SSFA2P28290 1259 aa14.54□□□□□ -0.08
PVT1-209ENST00000520913 KLHL34Q8N239 644 aa14.54□□□□□ -0.08
PVT1-209ENST00000520913 LINC00116Q8NCU8 138 aa14.54□□□□□ -0.08
PVT1-209ENST00000520913 ATG3Q9NT62 314 aa14.54□□□□□ -0.08
PVT1-209ENST00000520913 DIAPH1O60610 1272 aaKnown RBP14.53□□□□□ -0.08
PVT1-209ENST00000520913 ATP6V1AP38606 617 aa14.53□□□□□ -0.08
PVT1-209ENST00000520913 PHF14O94880 888 aa14.52□□□□□ -0.09
PVT1-209ENST00000520913 CABP4P57796 275 aa14.52□□□□□ -0.09
PVT1-209ENST00000520913 ITPK1Q13572 414 aa14.52□□□□□ -0.09
PVT1-209ENST00000520913 MSL1Q68DK7 614 aa14.52□□□□□ -0.09
PVT1-209ENST00000520913 KIAA1551Q9HCM1 1747 aa14.52□□□□□ -0.09
PVT1-209ENST00000520913 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.51□□□□□ -0.09
PVT1-209ENST00000520913 GNPATO15228 680 aa14.51□□□□□ -0.09
PVT1-209ENST00000520913 AKAP4Q5JQC9 854 aa14.51□□□□□ -0.09
PVT1-209ENST00000520913 RBM42Q9BTD8 480 aaKnown RBP14.51□□□□□ -0.09
PVT1-209ENST00000520913 HMOX1P09601 288 aa14.5□□□□□ -0.09
PVT1-209ENST00000520913 AMIGO3Q86WK7 504 aa14.5□□□□□ -0.09
PVT1-209ENST00000520913 CNTNAP4Q9C0A0 1308 aa14.49□□□□□ -0.09
PVT1-209ENST00000520913 CNGB1Q14028 1251 aaPredicted RBP14.49□□□□□ -0.09
PVT1-209ENST00000520913 KCPQ6ZWJ8 1503 aa14.49□□□□□ -0.09
PVT1-209ENST00000520913 BRCA1P38398 1863 aaKnown RBP14.48□□□□□ -0.09
PVT1-209ENST00000520913 N4BP2Q86UW6 1770 aaPredicted RBP14.48□□□□□ -0.09
PVT1-209ENST00000520913 NLGN2Q8NFZ4 835 aa14.48□□□□□ -0.09
PVT1-209ENST00000520913 SLC4A9Q96Q91 983 aa14.48□□□□□ -0.09
PVT1-209ENST00000520913 DLG5Q8TDM6 1919 aa14.48□□□□□ -0.09
PVT1-209ENST00000520913 GPR162Q16538 588 aa14.47□□□□□ -0.09
PVT1-209ENST00000520913 NFATC2IPQ8NCF5 419 aa14.47□□□□□ -0.09
PVT1-209ENST00000520913 RTCBQ9Y3I0 505 aaKnown RBP14.47□□□□□ -0.09
PVT1-209ENST00000520913 RC3H1Q5TC82 1133 aaKnown RBP14.46□□□□□ -0.09
PVT1-209ENST00000520913 SMIM5Q71RC9 77 aa14.46□□□□□ -0.09
PVT1-209ENST00000520913 CFAP53Q96M91 514 aa14.46□□□□□ -0.09
PVT1-209ENST00000520913 SLC52A2Q9HAB3 445 aa14.46□□□□□ -0.09
PVT1-209ENST00000520913 U2SURPO15042 1029 aaKnown RBP14.45□□□□□ -0.1
PVT1-209ENST00000520913 PTCD1O75127 700 aaKnown RBP14.45□□□□□ -0.1
PVT1-209ENST00000520913 ADRA2BP18089 450 aa14.45□□□□□ -0.1
PVT1-209ENST00000520913 MTHFSDQ2M296 383 aaKnown RBP14.45□□□□□ -0.1
PVT1-209ENST00000520913 PELP1Q8IZL8 1130 aaKnown RBP14.45□□□□□ -0.1
PVT1-209ENST00000520913 CD2APQ9Y5K6 639 aa14.45□□□□□ -0.1
PVT1-209ENST00000520913 SCN7AQ01118 1682 aa14.45□□□□□ -0.1
PVT1-209ENST00000520913 AFDNP55196 1824 aaKnown RBP14.44□□□□□ -0.1
PVT1-209ENST00000520913 RNMTO43148 476 aaKnown RBP14.44□□□□□ -0.1
PVT1-209ENST00000520913 ARFGEF1Q9Y6D6 1849 aa14.43□□□□□ -0.1
PVT1-209ENST00000520913 TRAPPC3LQ5T215 181 aa14.43□□□□□ -0.1
PVT1-209ENST00000520913 GAS2L2Q8NHY3 880 aa14.43□□□□□ -0.1
PVT1-209ENST00000520913 LGR6Q9HBX8 967 aa14.43□□□□□ -0.1
PVT1-209ENST00000520913 LAMB4A4D0S4 1761 aa14.42□□□□□ -0.1
PVT1-209ENST00000520913 RPS6KA4O75676 772 aa14.42□□□□□ -0.1
PVT1-209ENST00000520913 CRKLP46109 303 aaKnown RBP14.42□□□□□ -0.1
PVT1-209ENST00000520913 BCORQ6W2J9 1755 aa14.42□□□□□ -0.1
PVT1-209ENST00000520913 C10orf71Q711Q0 1435 aa14.41□□□□□ -0.1
PVT1-209ENST00000520913 PPP2R1AP30153 589 aa14.41□□□□□ -0.1
PVT1-209ENST00000520913 DLEC1Q9Y238 1755 aa14.41□□□□□ -0.1
PVT1-209ENST00000520913 NRXN2Q9P2S2 1712 aa14.41□□□□□ -0.1
PVT1-209ENST00000520913 RFC4P35249 363 aa14.4□□□□□ -0.1
PVT1-209ENST00000520913 ARHGEF1Q92888 912 aaKnown RBP14.4□□□□□ -0.1
PVT1-209ENST00000520913 NUDCQ9Y266 331 aa14.4□□□□□ -0.1
PVT1-209ENST00000520913 PXDNLA1KZ92 1463 aa14.39□□□□□ -0.11
PVT1-209ENST00000520913 GNAT3A8MTJ3 354 aa14.39□□□□□ -0.11
PVT1-209ENST00000520913 GRIN3BO60391 1043 aa14.39□□□□□ -0.11
PVT1-209ENST00000520913 MMP10P09238 476 aa14.39□□□□□ -0.11
PVT1-209ENST00000520913 YBX3P16989 372 aaKnown RBP eCLIP14.39□□□□□ -0.11
PVT1-209ENST00000520913 NLGN1Q8N2Q7 840 aa14.39□□□□□ -0.11
PVT1-209ENST00000520913 RSPH6AQ9H0K4 717 aa14.39□□□□□ -0.11
PVT1-209ENST00000520913 KDM3BQ7LBC6 1761 aa14.39□□□□□ -0.11
PVT1-209ENST00000520913 CEMIPQ8WUJ3 1361 aa14.38□□□□□ -0.11
PVT1-209ENST00000520913 GYS1P13807 737 aa14.38□□□□□ -0.11
PVT1-209ENST00000520913 PRKAR2BP31323 418 aa14.38□□□□□ -0.11
PVT1-209ENST00000520913 TEFQ10587 303 aa14.38□□□□□ -0.11
PVT1-209ENST00000520913 SLC39A6Q13433 755 aa14.38□□□□□ -0.11
PVT1-209ENST00000520913 ZNF784Q8NCA9 323 aaPredicted RBP14.38□□□□□ -0.11
PVT1-209ENST00000520913 CCDC87Q9NVE4 849 aa14.38□□□□□ -0.11
PVT1-209ENST00000520913 USP42Q9H9J4 1324 aaKnown RBP14.38□□□□□ -0.11
PVT1-209ENST00000520913 COL15A1P39059 1388 aa14.37□□□□□ -0.11
PVT1-209ENST00000520913 DNAJC10Q8IXB1 793 aa14.37□□□□□ -0.11
PVT1-209ENST00000520913 TTC5Q8N0Z6 440 aa14.37□□□□□ -0.11
PVT1-209ENST00000520913 VSIG10Q8N0Z9 540 aa14.37□□□□□ -0.11
PVT1-209ENST00000520913 PARP3Q9Y6F1 533 aa14.36□□□□□ -0.11
PVT1-209ENST00000520913 SOS1Q07889 1333 aaPredicted RBP14.36□□□□□ -0.11
PVT1-209ENST00000520913 U2AF1L5P0DN76 240 aaPredicted RBP14.35□□□□□ -0.11
PVT1-209ENST00000520913 CYP19A1P11511 503 aaPredicted RBP14.35□□□□□ -0.11
PVT1-209ENST00000520913 U2AF1Q01081 240 aaKnown RBP eCLIP14.35□□□□□ -0.11
PVT1-209ENST00000520913 INTS5Q6P9B9 1019 aaKnown RBP14.35□□□□□ -0.11
PVT1-209ENST00000520913 HEG1Q9ULI3 1381 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms