RNA–Protein interactions for RNA: ENST00000520824.1

LINC00824-205, long intergenic non-protein coding RNA 824, humanhuman

TSL 2

Gene LINC00824, Length 892 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00824-205ENST00000520824 C4AP0C0L4 1744 aa13.09□□□□□ -0.31
LINC00824-205ENST00000520824 HTRA3P83110 453 aa13.09□□□□□ -0.31
LINC00824-205ENST00000520824 ASAP1Q9ULH1 1129 aa13.09□□□□□ -0.31
LINC00824-205ENST00000520824 CD2APQ9Y5K6 639 aa13.09□□□□□ -0.31
LINC00824-205ENST00000520824 HSPA6P17066 643 aa13.08□□□□□ -0.32
LINC00824-205ENST00000520824 DSG3P32926 999 aa13.08□□□□□ -0.32
LINC00824-205ENST00000520824 GPBP1L1Q9HC44 474 aaPredicted RBP13.08□□□□□ -0.32
LINC00824-205ENST00000520824 COL5A3P25940 1745 aaPredicted RBP13.08□□□□□ -0.32
LINC00824-205ENST00000520824 PCDH11XQ9BZA7 1347 aa13.07□□□□□ -0.32
LINC00824-205ENST00000520824 PCDH11YQ9BZA8 1340 aa13.07□□□□□ -0.32
LINC00824-205ENST00000520824 FLT4P35916 1363 aa13.07□□□□□ -0.32
LINC00824-205ENST00000520824 TATP17735 454 aaPredicted RBP13.06□□□□□ -0.32
LINC00824-205ENST00000520824 RAPGEF4Q8WZA2 1011 aa13.06□□□□□ -0.32
LINC00824-205ENST00000520824 ZEB1P37275 1124 aaPredicted RBP13.05□□□□□ -0.32
LINC00824-205ENST00000520824 KDRP35968 1356 aa13.05□□□□□ -0.32
LINC00824-205ENST00000520824 NSD3Q9BZ95 1437 aa13.05□□□□□ -0.32
LINC00824-205ENST00000520824 LOC102724428A0A0B4J2F2 783 aa13.04□□□□□ -0.32
LINC00824-205ENST00000520824 GNPATO15228 680 aa13.04□□□□□ -0.32
LINC00824-205ENST00000520824 SIK1P57059 783 aa13.04□□□□□ -0.32
LINC00824-205ENST00000520824 DNAJC5GQ8N7S2 189 aa13.04□□□□□ -0.32
LINC00824-205ENST00000520824 AK7Q96M32 723 aa13.04□□□□□ -0.32
LINC00824-205ENST00000520824 NMRK2Q9NPI5 230 aa13.04□□□□□ -0.32
LINC00824-205ENST00000520824 CGNL1Q0VF96 1302 aa13.04□□□□□ -0.32
LINC00824-205ENST00000520824 KIF24Q5T7B8 1368 aa13.04□□□□□ -0.32
LINC00824-205ENST00000520824 ADAMTS7Q9UKP4 1686 aa13.03□□□□□ -0.32
LINC00824-205ENST00000520824 A0A0G2JLW4 131 aa13.03□□□□□ -0.32
LINC00824-205ENST00000520824 MMP10P09238 476 aa13.03□□□□□ -0.32
LINC00824-205ENST00000520824 NKX1-1Q15270 411 aaPredicted RBP13.03□□□□□ -0.32
LINC00824-205ENST00000520824 EYA1Q99502 592 aa13.03□□□□□ -0.32
LINC00824-205ENST00000520824 ATG3Q9NT62 314 aa13.03□□□□□ -0.32
LINC00824-205ENST00000520824 C10orf71Q711Q0 1435 aa13.03□□□□□ -0.32
LINC00824-205ENST00000520824 WDR90Q96KV7 1748 aa13.02□□□□□ -0.32
LINC00824-205ENST00000520824 PANK3Q9H999 370 aa13.02□□□□□ -0.33
LINC00824-205ENST00000520824 SMG6Q86US8 1419 aaKnown RBP13.02□□□□□ -0.33
LINC00824-205ENST00000520824 TJP1Q07157 1748 aa13.02□□□□□ -0.33
LINC00824-205ENST00000520824 KDM6AO15550 1401 aaPredicted RBP13.01□□□□□ -0.33
LINC00824-205ENST00000520824 KIF7Q2M1P5 1343 aa13□□□□□ -0.33
LINC00824-205ENST00000520824 PPM1GO15355 546 aaPredicted RBP13□□□□□ -0.33
LINC00824-205ENST00000520824 DPEP1P16444 411 aa13□□□□□ -0.33
LINC00824-205ENST00000520824 KCNA3P22001 575 aa13□□□□□ -0.33
LINC00824-205ENST00000520824 SPINK5Q9NQ38 1064 aaPredicted RBP13□□□□□ -0.33
LINC00824-205ENST00000520824 SBF1O95248 1867 aa12.99□□□□□ -0.33
LINC00824-205ENST00000520824 ARFGEF1Q9Y6D6 1849 aa12.99□□□□□ -0.33
LINC00824-205ENST00000520824 PHKG2P15735 406 aa12.99□□□□□ -0.33
LINC00824-205ENST00000520824 SSFA2P28290 1259 aa12.99□□□□□ -0.33
LINC00824-205ENST00000520824 SRP68Q9UHB9 627 aaKnown RBP12.99□□□□□ -0.33
LINC00824-205ENST00000520824 KNSTRNQ9Y448 316 aa12.99□□□□□ -0.33
LINC00824-205ENST00000520824 U3KPZ7 1027 aaPredicted RBP12.99□□□□□ -0.33
LINC00824-205ENST00000520824 PER1O15534 1290 aaPredicted RBP12.98□□□□□ -0.33
LINC00824-205ENST00000520824 ATP6V1AP38606 617 aa12.98□□□□□ -0.33
LINC00824-205ENST00000520824 PRELPP51888 382 aa12.98□□□□□ -0.33
LINC00824-205ENST00000520824 POLKQ9UBT6 870 aa12.98□□□□□ -0.33
LINC00824-205ENST00000520824 BCS1LQ9Y276 419 aa12.98□□□□□ -0.33
LINC00824-205ENST00000520824 KCPQ6ZWJ8 1503 aa12.98□□□□□ -0.33
LINC00824-205ENST00000520824 WASHC2AQ641Q2 1341 aa12.97□□□□□ -0.33
LINC00824-205ENST00000520824 GYS1P13807 737 aa12.97□□□□□ -0.33
LINC00824-205ENST00000520824 DDR1Q08345 913 aa12.97□□□□□ -0.33
LINC00824-205ENST00000520824 EIF4A2Q14240 407 aaKnown RBP12.97□□□□□ -0.33
LINC00824-205ENST00000520824 AEBP1Q8IUX7 1158 aa12.97□□□□□ -0.33
LINC00824-205ENST00000520824 FLAD1Q8NFF5 587 aa12.97□□□□□ -0.33
LINC00824-205ENST00000520824 SMARCC1Q92922 1105 aaPredicted RBP12.97□□□□□ -0.33
LINC00824-205ENST00000520824 POLR3GLQ9BT43 218 aa12.97□□□□□ -0.33
LINC00824-205ENST00000520824 ZNF831Q5JPB2 1677 aa12.96□□□□□ -0.33
LINC00824-205ENST00000520824 TNNT2P45379 298 aaPredicted RBP12.96□□□□□ -0.33
LINC00824-205ENST00000520824 ARHGEF1Q92888 912 aaKnown RBP12.96□□□□□ -0.33
LINC00824-205ENST00000520824 TMOD3Q9NYL9 352 aa12.96□□□□□ -0.33
LINC00824-205ENST00000520824 NPC1L1Q9UHC9 1359 aa12.95□□□□□ -0.34
LINC00824-205ENST00000520824 AFDNP55196 1824 aaKnown RBP12.95□□□□□ -0.34
LINC00824-205ENST00000520824 CAPN15O75808 1086 aa12.95□□□□□ -0.34
LINC00824-205ENST00000520824 COL13A1Q5TAT6 717 aaPredicted RBP12.95□□□□□ -0.34
LINC00824-205ENST00000520824 CHRNA5P30532 468 aa12.94□□□□□ -0.34
LINC00824-205ENST00000520824 ARHGAP27Q6ZUM4 889 aa12.94□□□□□ -0.34
LINC00824-205ENST00000520824 VIRMAQ69YN4 1812 aaKnown RBP12.94□□□□□ -0.34
LINC00824-205ENST00000520824 FKBP8Q14318 412 aa12.93□□□□□ -0.34
LINC00824-205ENST00000520824 AMER1Q5JTC6 1135 aaPredicted RBP12.93□□□□□ -0.34
LINC00824-205ENST00000520824 C9orf131Q5VYM1 1079 aa12.93□□□□□ -0.34
LINC00824-205ENST00000520824 RBM42Q9BTD8 480 aaKnown RBP12.93□□□□□ -0.34
LINC00824-205ENST00000520824 CCDC88AQ3V6T2 1871 aa12.92□□□□□ -0.34
LINC00824-205ENST00000520824 FCHSD2O94868 740 aa12.91□□□□□ -0.34
LINC00824-205ENST00000520824 RASSF7Q02833 373 aa12.91□□□□□ -0.34
LINC00824-205ENST00000520824 MORC1Q86VD1 984 aa12.91□□□□□ -0.34
LINC00824-205ENST00000520824 IFNL2Q8IZJ0 200 aa12.91□□□□□ -0.34
LINC00824-205ENST00000520824 SPG7Q9UQ90 795 aa12.91□□□□□ -0.34
LINC00824-205ENST00000520824 SCN11AQ9UI33 1791 aa12.91□□□□□ -0.34
LINC00824-205ENST00000520824 PTCD1O75127 700 aaKnown RBP12.9□□□□□ -0.34
LINC00824-205ENST00000520824 TOMM70O94826 608 aa12.9□□□□□ -0.34
LINC00824-205ENST00000520824 APLP1P51693 650 aa12.9□□□□□ -0.34
LINC00824-205ENST00000520824 CARMIL3Q8ND23 1372 aa12.9□□□□□ -0.34
LINC00824-205ENST00000520824 CNTNAP4Q9C0A0 1308 aa12.89□□□□□ -0.35
LINC00824-205ENST00000520824 DLEC1Q9Y238 1755 aa12.89□□□□□ -0.35
LINC00824-205ENST00000520824 COL11A2P13942 1736 aaPredicted RBP12.89□□□□□ -0.35
LINC00824-205ENST00000520824 TIAM2Q8IVF5 1701 aa12.89□□□□□ -0.35
LINC00824-205ENST00000520824 TRAPPC3LQ5T215 181 aa12.89□□□□□ -0.35
LINC00824-205ENST00000520824 RTCBQ9Y3I0 505 aaKnown RBP12.89□□□□□ -0.35
LINC00824-205ENST00000520824 PLEKHG2Q9H7P9 1386 aa12.89□□□□□ -0.35
LINC00824-205ENST00000520824 ANKRD31Q8N7Z5 1873 aa12.89□□□□□ -0.35
LINC00824-205ENST00000520824 NRXN2Q9P2S2 1712 aa12.88□□□□□ -0.35
LINC00824-205ENST00000520824 RPS6KA4O75676 772 aa12.88□□□□□ -0.35
LINC00824-205ENST00000520824 CRKLP46109 303 aaKnown RBP12.88□□□□□ -0.35
LINC00824-205ENST00000520824 TGFB2P61812 414 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms