RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 ATP6V1AP38606 617 aa26.83■■□□□ 1.89
PABPC1-215ENST00000520804 AMOTQ4VCS5 1084 aa26.83■■□□□ 1.89
PABPC1-215ENST00000520804 AMER1Q5JTC6 1135 aaPredicted RBP26.83■■□□□ 1.89
PABPC1-215ENST00000520804 SMIM5Q71RC9 77 aa26.83■■□□□ 1.89
PABPC1-215ENST00000520804 DCAF5Q96JK2 942 aa26.83■■□□□ 1.89
PABPC1-215ENST00000520804 AEBP1Q8IUX7 1158 aa26.82■■□□□ 1.88
PABPC1-215ENST00000520804 ZNF530Q6P9A1 599 aaPredicted RBP26.81■■□□□ 1.88
PABPC1-215ENST00000520804 CD2APQ9Y5K6 639 aa26.81■■□□□ 1.88
PABPC1-215ENST00000520804 KDRP35968 1356 aa26.8■■□□□ 1.88
PABPC1-215ENST00000520804 KDM6AO15550 1401 aaPredicted RBP26.8■■□□□ 1.88
PABPC1-215ENST00000520804 IL13P35225 146 aa26.79■■□□□ 1.88
PABPC1-215ENST00000520804 SULT6B1Q6IMI4 303 aa26.79■■□□□ 1.88
PABPC1-215ENST00000520804 GNPATO15228 680 aa26.78■■□□□ 1.88
PABPC1-215ENST00000520804 ZNF831Q5JPB2 1677 aa26.78■■□□□ 1.88
PABPC1-215ENST00000520804 YBX3P16989 372 aaKnown RBP eCLIP26.77■■□□□ 1.88
PABPC1-215ENST00000520804 CABP4P57796 275 aa26.76■■□□□ 1.87
PABPC1-215ENST00000520804 C1orf141Q5JVX7 400 aa26.76■■□□□ 1.87
PABPC1-215ENST00000520804 SLC4A9Q96Q91 983 aa26.76■■□□□ 1.87
PABPC1-215ENST00000520804 GOLGB1Q14789 3259 aaKnown RBP26.75■■□□□ 1.87
PABPC1-215ENST00000520804 GRIN3BO60391 1043 aa26.75■■□□□ 1.87
PABPC1-215ENST00000520804 MTHFSP49914 203 aa26.75■■□□□ 1.87
PABPC1-215ENST00000520804 RBM42Q9BTD8 480 aaKnown RBP26.74■■□□□ 1.87
PABPC1-215ENST00000520804 PER1O15534 1290 aaPredicted RBP26.73■■□□□ 1.87
PABPC1-215ENST00000520804 COL5A3P25940 1745 aaPredicted RBP26.71■■□□□ 1.87
PABPC1-215ENST00000520804 RC3H1Q5TC82 1133 aaKnown RBP26.7■■□□□ 1.86
PABPC1-215ENST00000520804 RTCBQ9Y3I0 505 aaKnown RBP26.7■■□□□ 1.86
PABPC1-215ENST00000520804 TRAPPC3LQ5T215 181 aa26.69■■□□□ 1.86
PABPC1-215ENST00000520804 NFATC2IPQ8NCF5 419 aa26.69■■□□□ 1.86
PABPC1-215ENST00000520804 CNTNAP4Q9C0A0 1308 aa26.68■■□□□ 1.86
PABPC1-215ENST00000520804 SCN11AQ9UI33 1791 aa26.67■■□□□ 1.86
PABPC1-215ENST00000520804 CC2D1BQ5T0F9 858 aaKnown RBP26.67■■□□□ 1.86
PABPC1-215ENST00000520804 ADRA2BP18089 450 aa26.66■■□□□ 1.86
PABPC1-215ENST00000520804 AKAP4Q5JQC9 854 aa26.66■■□□□ 1.86
PABPC1-215ENST00000520804 PTCD1O75127 700 aaKnown RBP26.65■■□□□ 1.86
PABPC1-215ENST00000520804 RPS6KA4O75676 772 aa26.64■■□□□ 1.86
PABPC1-215ENST00000520804 MMP10P09238 476 aa26.64■■□□□ 1.86
PABPC1-215ENST00000520804 ARHGEF1Q92888 912 aaKnown RBP26.64■■□□□ 1.86
PABPC1-215ENST00000520804 HMOX1P09601 288 aa26.63■■□□□ 1.85
PABPC1-215ENST00000520804 MYH14Q7Z406 1995 aaKnown RBP26.62■■□□□ 1.85
PABPC1-215ENST00000520804 DIAPH1O60610 1272 aaKnown RBP26.62■■□□□ 1.85
PABPC1-215ENST00000520804 NLGN1Q8N2Q7 840 aa26.62■■□□□ 1.85
PABPC1-215ENST00000520804 CICQ96RK0 1608 aaPredicted RBP26.61■■□□□ 1.85
PABPC1-215ENST00000520804 NPC1L1Q9UHC9 1359 aa26.61■■□□□ 1.85
PABPC1-215ENST00000520804 TJP1Q07157 1748 aa26.6■■□□□ 1.85
PABPC1-215ENST00000520804 RFC4P35249 363 aa26.6■■□□□ 1.85
PABPC1-215ENST00000520804 GYS1P13807 737 aa26.59■■□□□ 1.85
PABPC1-215ENST00000520804 C1QTNF8P60827 252 aa26.59■■□□□ 1.85
PABPC1-215ENST00000520804 SLC52A2Q9HAB3 445 aa26.59■■□□□ 1.85
PABPC1-215ENST00000520804 LGR6Q9HBX8 967 aa26.59■■□□□ 1.85
PABPC1-215ENST00000520804 C4AP0C0L4 1744 aa26.59■■□□□ 1.85
PABPC1-215ENST00000520804 KIF13BQ9NQT8 1826 aa26.58■■□□□ 1.85
PABPC1-215ENST00000520804 MRC1P22897 1456 aa26.58■■□□□ 1.85
PABPC1-215ENST00000520804 CRKLP46109 303 aaKnown RBP26.58■■□□□ 1.85
PABPC1-215ENST00000520804 WWC3Q9ULE0 1092 aa26.58■■□□□ 1.85
PABPC1-215ENST00000520804 MTHFSDQ2M296 383 aaKnown RBP26.57■■□□□ 1.84
PABPC1-215ENST00000520804 RNMTO43148 476 aaKnown RBP26.56■■□□□ 1.84
PABPC1-215ENST00000520804 VIRMAQ69YN4 1812 aaKnown RBP26.55■■□□□ 1.84
PABPC1-215ENST00000520804 COL3A1P02461 1466 aaPredicted RBP26.55■■□□□ 1.84
PABPC1-215ENST00000520804 ADAMTS7Q9UKP4 1686 aa26.55■■□□□ 1.84
PABPC1-215ENST00000520804 GIGYF1O75420 1035 aaPredicted RBP26.55■■□□□ 1.84
PABPC1-215ENST00000520804 PXDNLA1KZ92 1463 aa26.55■■□□□ 1.84
PABPC1-215ENST00000520804 KIAA1551Q9HCM1 1747 aa26.54■■□□□ 1.84
PABPC1-215ENST00000520804 CNGB1Q14028 1251 aaPredicted RBP26.54■■□□□ 1.84
PABPC1-215ENST00000520804 C10orf71Q711Q0 1435 aa26.54■■□□□ 1.84
PABPC1-215ENST00000520804 TGFB2P61812 414 aa26.53■■□□□ 1.84
PABPC1-215ENST00000520804 INTS5Q6P9B9 1019 aaKnown RBP26.53■■□□□ 1.84
PABPC1-215ENST00000520804 ATP10DQ9P241 1426 aa26.53■■□□□ 1.84
PABPC1-215ENST00000520804 CCDC87Q9NVE4 849 aa26.52■■□□□ 1.84
PABPC1-215ENST00000520804 PARP3Q9Y6F1 533 aa26.52■■□□□ 1.84
PABPC1-215ENST00000520804 USP42Q9H9J4 1324 aaKnown RBP26.51■■□□□ 1.83
PABPC1-215ENST00000520804 SLC39A6Q13433 755 aa26.51■■□□□ 1.83
PABPC1-215ENST00000520804 DNAJC10Q8IXB1 793 aa26.51■■□□□ 1.83
PABPC1-215ENST00000520804 SRP68Q9UHB9 627 aaKnown RBP26.51■■□□□ 1.83
PABPC1-215ENST00000520804 ADCY9O60503 1353 aa26.5■■□□□ 1.83
PABPC1-215ENST00000520804 N4BP2Q86UW6 1770 aaPredicted RBP26.5■■□□□ 1.83
PABPC1-215ENST00000520804 KCPQ6ZWJ8 1503 aa26.49■■□□□ 1.83
PABPC1-215ENST00000520804 U2SURPO15042 1029 aaKnown RBP26.49■■□□□ 1.83
PABPC1-215ENST00000520804 A0A0G2JLW4 131 aa26.48■■□□□ 1.83
PABPC1-215ENST00000520804 FKBP8Q14318 412 aa26.48■■□□□ 1.83
PABPC1-215ENST00000520804 CYP19A1P11511 503 aaPredicted RBP26.47■■□□□ 1.83
PABPC1-215ENST00000520804 SENP3-EIF4A1A0A087X0R7 540 aa26.46■■□□□ 1.83
PABPC1-215ENST00000520804 SOS1Q07889 1333 aaPredicted RBP26.45■■□□□ 1.83
PABPC1-215ENST00000520804 DPEP1P16444 411 aa26.44■■□□□ 1.82
PABPC1-215ENST00000520804 VSIG10Q8N0Z9 540 aa26.44■■□□□ 1.82
PABPC1-215ENST00000520804 UBR2Q8IWV8 1755 aa26.43■■□□□ 1.82
PABPC1-215ENST00000520804 DDR1Q08345 913 aa26.43■■□□□ 1.82
PABPC1-215ENST00000520804 GAS2L2Q8NHY3 880 aa26.43■■□□□ 1.82
PABPC1-215ENST00000520804 GPBP1L1Q9HC44 474 aaPredicted RBP26.43■■□□□ 1.82
PABPC1-215ENST00000520804 BCS1LQ9Y276 419 aa26.43■■□□□ 1.82
PABPC1-215ENST00000520804 ZPR1O75312 459 aa26.42■■□□□ 1.82
PABPC1-215ENST00000520804 BRCA1P38398 1863 aaKnown RBP26.42■■□□□ 1.82
PABPC1-215ENST00000520804 GNAT3A8MTJ3 354 aa26.41■■□□□ 1.82
PABPC1-215ENST00000520804 TM4SF1P30408 202 aa26.41■■□□□ 1.82
PABPC1-215ENST00000520804 USPL1Q5W0Q7 1092 aa26.41■■□□□ 1.82
PABPC1-215ENST00000520804 IL17REQ8NFR9 667 aa26.41■■□□□ 1.82
PABPC1-215ENST00000520804 CFAP53Q96M91 514 aa26.4■■□□□ 1.82
PABPC1-215ENST00000520804 ZBTB1Q9Y2K1 713 aa26.4■■□□□ 1.82
PABPC1-215ENST00000520804 COL15A1P39059 1388 aa26.39■■□□□ 1.82
PABPC1-215ENST00000520804 POLRMTO00411 1230 aaKnown RBP26.39■■□□□ 1.82
PABPC1-215ENST00000520804 KCNA3P22001 575 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms