RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 RIMS1Q86UR5 1692 aaKnown RBP11.07□□□□□ -0.64
CTHRC1-203ENST00000520337 GPRASP1Q5JY77 1395 aa11.06□□□□□ -0.64
CTHRC1-203ENST00000520337 GJA5P36382 358 aa11.06□□□□□ -0.64
CTHRC1-203ENST00000520337 EIF4G2P78344 907 aaKnown RBP eCLIP11.06□□□□□ -0.64
CTHRC1-203ENST00000520337 ADGRF5Q8IZF2 1346 aa11.06□□□□□ -0.64
CTHRC1-203ENST00000520337 TNRQ92752 1358 aa11.05□□□□□ -0.64
CTHRC1-203ENST00000520337 SETD1BQ9UPS6 1966 aaKnown RBP11.05□□□□□ -0.64
CTHRC1-203ENST00000520337 POLR1AO95602 1720 aaPredicted RBP11.05□□□□□ -0.64
CTHRC1-203ENST00000520337 CEBPAP49715 358 aaPredicted RBP11.05□□□□□ -0.64
CTHRC1-203ENST00000520337 TRIM32Q13049 653 aa11.05□□□□□ -0.64
CTHRC1-203ENST00000520337 UBR1Q8IWV7 1749 aa11.05□□□□□ -0.64
CTHRC1-203ENST00000520337 PCDHGC3Q9UN70 934 aa11.05□□□□□ -0.64
CTHRC1-203ENST00000520337 A2ML1A8K2U0 1454 aa11.05□□□□□ -0.64
CTHRC1-203ENST00000520337 ZFYVE9O95405 1425 aa11.04□□□□□ -0.64
CTHRC1-203ENST00000520337 MOXD2PA6NHM9 499 aa11.04□□□□□ -0.64
CTHRC1-203ENST00000520337 C6orf229H3BNL8 230 aa11.04□□□□□ -0.64
CTHRC1-203ENST00000520337 FOXC1Q12948 553 aa11.04□□□□□ -0.64
CTHRC1-203ENST00000520337 SYMPKQ92797 1274 aaKnown RBP11.04□□□□□ -0.64
CTHRC1-203ENST00000520337 IQGAP1P46940 1657 aa11.04□□□□□ -0.64
CTHRC1-203ENST00000520337 ROCK2O75116 1388 aaKnown RBP11.03□□□□□ -0.64
CTHRC1-203ENST00000520337 USP47Q96K76 1375 aa11.03□□□□□ -0.64
CTHRC1-203ENST00000520337 SPDYE5A6NIY4 337 aa11.03□□□□□ -0.64
CTHRC1-203ENST00000520337 POTECB2RU33 542 aa11.03□□□□□ -0.64
CTHRC1-203ENST00000520337 CARD11Q9BXL7 1154 aa11.03□□□□□ -0.64
CTHRC1-203ENST00000520337 PIK3C2GO75747 1445 aa11.02□□□□□ -0.64
CTHRC1-203ENST00000520337 FAM187AA6NFU0 413 aa11.02□□□□□ -0.65
CTHRC1-203ENST00000520337 MS4A1P11836 297 aa11.02□□□□□ -0.65
CTHRC1-203ENST00000520337 MYT1Q01538 1121 aa11.02□□□□□ -0.65
CTHRC1-203ENST00000520337 PDE4DQ08499 809 aa11.02□□□□□ -0.65
CTHRC1-203ENST00000520337 NLRP1Q9C000 1473 aa11.01□□□□□ -0.65
CTHRC1-203ENST00000520337 C11orf95C9JLR9 678 aaPredicted RBP11.01□□□□□ -0.65
CTHRC1-203ENST00000520337 NDUFV2P19404 249 aa11.01□□□□□ -0.65
CTHRC1-203ENST00000520337 DIEXFQ68CQ4 756 aaKnown RBP11.01□□□□□ -0.65
CTHRC1-203ENST00000520337 CCDC24Q8N4L8 307 aa11.01□□□□□ -0.65
CTHRC1-203ENST00000520337 TBC1D2Q9BYX2 928 aa11.01□□□□□ -0.65
CTHRC1-203ENST00000520337 SETBP1Q9Y6X0 1596 aa11.01□□□□□ -0.65
CTHRC1-203ENST00000520337 WNT7AO00755 349 aa11□□□□□ -0.65
CTHRC1-203ENST00000520337 MTMR2Q13614 643 aa11□□□□□ -0.65
CTHRC1-203ENST00000520337 CFAP70Q5T0N1 1121 aa11□□□□□ -0.65
CTHRC1-203ENST00000520337 NUTM2DQ5VT03 806 aaPredicted RBP11□□□□□ -0.65
CTHRC1-203ENST00000520337 C14orf93Q9H972 538 aaKnown RBP11□□□□□ -0.65
CTHRC1-203ENST00000520337 TOR4AQ9NXH8 423 aa11□□□□□ -0.65
CTHRC1-203ENST00000520337 MYO3AQ8NEV4 1616 aa10.99□□□□□ -0.65
CTHRC1-203ENST00000520337 PRKCSHP14314 528 aaPredicted RBP10.99□□□□□ -0.65
CTHRC1-203ENST00000520337 CYP4X1Q8N118 509 aa10.99□□□□□ -0.65
CTHRC1-203ENST00000520337 NUDT12Q9BQG2 462 aa10.99□□□□□ -0.65
CTHRC1-203ENST00000520337 SLC24A3Q9HC58 644 aa10.99□□□□□ -0.65
CTHRC1-203ENST00000520337 RIMS2Q9UQ26 1411 aa10.99□□□□□ -0.65
CTHRC1-203ENST00000520337 ADGRB1O14514 1584 aa10.99□□□□□ -0.65
CTHRC1-203ENST00000520337 ST20-MTHFSA0A0A6YYL1 179 aa10.98□□□□□ -0.65
CTHRC1-203ENST00000520337 DESI1Q6ICB0 168 aa10.98□□□□□ -0.65
CTHRC1-203ENST00000520337 RSBN1LQ6PCB5 846 aaPredicted RBP10.98□□□□□ -0.65
CTHRC1-203ENST00000520337 WASHC2AQ641Q2 1341 aa10.98□□□□□ -0.65
CTHRC1-203ENST00000520337 SETD1AO15047 1707 aaKnown RBP10.98□□□□□ -0.65
CTHRC1-203ENST00000520337 WNT7BP56706 349 aa10.97□□□□□ -0.65
CTHRC1-203ENST00000520337 PTPRNQ16849 979 aa10.97□□□□□ -0.65
CTHRC1-203ENST00000520337 NRXN3Q9Y4C0 1643 aa10.97□□□□□ -0.65
CTHRC1-203ENST00000520337 SCAF11Q99590 1463 aaKnown RBP10.96□□□□□ -0.65
CTHRC1-203ENST00000520337 TMEM2Q9UHN6 1383 aa10.96□□□□□ -0.65
CTHRC1-203ENST00000520337 SPTLC1O15269 473 aa10.96□□□□□ -0.65
CTHRC1-203ENST00000520337 ZNF142P52746 1687 aaPredicted RBP10.95□□□□□ -0.66
CTHRC1-203ENST00000520337 ALKQ9UM73 1620 aa10.95□□□□□ -0.66
CTHRC1-203ENST00000520337 ASXL1Q8IXJ9 1541 aa10.95□□□□□ -0.66
CTHRC1-203ENST00000520337 CCDC7Q96M83 1385 aa10.95□□□□□ -0.66
CTHRC1-203ENST00000520337 CCNYL3P0C7X3 344 aa10.95□□□□□ -0.66
CTHRC1-203ENST00000520337 DDX10Q13206 875 aaKnown RBP10.95□□□□□ -0.66
CTHRC1-203ENST00000520337 TPRNQ4KMQ1 711 aa10.95□□□□□ -0.66
CTHRC1-203ENST00000520337 PRR7Q8TB68 274 aa10.95□□□□□ -0.66
CTHRC1-203ENST00000520337 TESK2Q96S53 571 aa10.95□□□□□ -0.66
CTHRC1-203ENST00000520337 CEP170BQ9Y4F5 1589 aaPredicted RBP10.94□□□□□ -0.66
CTHRC1-203ENST00000520337 SLIT1O75093 1534 aa10.94□□□□□ -0.66
CTHRC1-203ENST00000520337 PTPRMP28827 1452 aa10.94□□□□□ -0.66
CTHRC1-203ENST00000520337 ARHGAP23Q9P227 1491 aa10.94□□□□□ -0.66
CTHRC1-203ENST00000520337 KIF7Q2M1P5 1343 aa10.94□□□□□ -0.66
CTHRC1-203ENST00000520337 AVPP01185 164 aa10.94□□□□□ -0.66
CTHRC1-203ENST00000520337 LCE2AQ5TA79 106 aaPredicted RBP10.94□□□□□ -0.66
CTHRC1-203ENST00000520337 PRPF38BQ5VTL8 546 aaKnown RBP10.94□□□□□ -0.66
CTHRC1-203ENST00000520337 CRIPAKQ8N1N5 446 aa10.94□□□□□ -0.66
CTHRC1-203ENST00000520337 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.94□□□□□ -0.66
CTHRC1-203ENST00000520337 SNIP1Q8TAD8 396 aaKnown RBP10.94□□□□□ -0.66
CTHRC1-203ENST00000520337 ARHGEF28Q8N1W1 1705 aaKnown RBP10.93□□□□□ -0.66
CTHRC1-203ENST00000520337 TTC24A2A3L6 582 aaPredicted RBP10.93□□□□□ -0.66
CTHRC1-203ENST00000520337 TMEM132EQ6IEE7 984 aa10.93□□□□□ -0.66
CTHRC1-203ENST00000520337 ZBTB3Q9H5J0 574 aa10.93□□□□□ -0.66
CTHRC1-203ENST00000520337 LTKP29376 864 aa10.92□□□□□ -0.66
CTHRC1-203ENST00000520337 RIC3Q7Z5B4 369 aa10.92□□□□□ -0.66
CTHRC1-203ENST00000520337 MRGPRX2Q96LB1 330 aa10.92□□□□□ -0.66
CTHRC1-203ENST00000520337 EVA1BQ9NVM1 165 aa10.92□□□□□ -0.66
CTHRC1-203ENST00000520337 CTC1Q2NKJ3 1217 aa10.91□□□□□ -0.66
CTHRC1-203ENST00000520337 TUSC1Q2TAM9 212 aa10.91□□□□□ -0.66
CTHRC1-203ENST00000520337 THEMISQ8N1K5 641 aaPredicted RBP10.91□□□□□ -0.66
CTHRC1-203ENST00000520337 QRICH2Q9H0J4 1663 aa10.91□□□□□ -0.66
CTHRC1-203ENST00000520337 RC3H1Q5TC82 1133 aaKnown RBP10.9□□□□□ -0.66
CTHRC1-203ENST00000520337 AAASQ9NRG9 546 aa10.9□□□□□ -0.66
CTHRC1-203ENST00000520337 EIF3AQ14152 1382 aaKnown RBP10.9□□□□□ -0.67
CTHRC1-203ENST00000520337 DISP3Q9P2K9 1392 aa10.9□□□□□ -0.67
CTHRC1-203ENST00000520337 SKOR1P84550 965 aa10.89□□□□□ -0.67
CTHRC1-203ENST00000520337 PTCRAQ6ISU1 281 aaPredicted RBP10.89□□□□□ -0.67
CTHRC1-203ENST00000520337 TXNDC2Q86VQ3 553 aa10.89□□□□□ -0.67
CTHRC1-203ENST00000520337 TRAK1Q9UPV9 953 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms