RNA–Protein interactions for RNA: ENST00000519712.1

NSMCE2-207, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-207ENST00000519712 HSP90AB1P08238 724 aaKnown RBP15.32■□□□□ 0.04
NSMCE2-207ENST00000519712 PLEKHO1Q53GL0 409 aaPredicted RBP15.32■□□□□ 0.04
NSMCE2-207ENST00000519712 COL23A1Q86Y22 540 aaPredicted RBP15.32■□□□□ 0.04
NSMCE2-207ENST00000519712 DCAF5Q96JK2 942 aa15.32■□□□□ 0.04
NSMCE2-207ENST00000519712 SCN11AQ9UI33 1791 aa15.31■□□□□ 0.04
NSMCE2-207ENST00000519712 LOC102724428A0A0B4J2F2 783 aa15.31■□□□□ 0.04
NSMCE2-207ENST00000519712 MTHFSP49914 203 aa15.31■□□□□ 0.04
NSMCE2-207ENST00000519712 SIK1P57059 783 aa15.31■□□□□ 0.04
NSMCE2-207ENST00000519712 ADAMTS7Q9UKP4 1686 aa15.31■□□□□ 0.04
NSMCE2-207ENST00000519712 COL5A3P25940 1745 aaPredicted RBP15.31■□□□□ 0.04
NSMCE2-207ENST00000519712 SULT6B1Q6IMI4 303 aa15.3■□□□□ 0.04
NSMCE2-207ENST00000519712 ZNF530Q6P9A1 599 aaPredicted RBP15.3■□□□□ 0.04
NSMCE2-207ENST00000519712 FLAD1Q8NFF5 587 aa15.3■□□□□ 0.04
NSMCE2-207ENST00000519712 ASAP1Q9ULH1 1129 aa15.3■□□□□ 0.04
NSMCE2-207ENST00000519712 MRC1P22897 1456 aa15.29■□□□□ 0.04
NSMCE2-207ENST00000519712 POLD1P28340 1107 aa15.29■□□□□ 0.04
NSMCE2-207ENST00000519712 ATG3Q9NT62 314 aa15.29■□□□□ 0.04
NSMCE2-207ENST00000519712 CC2D1BQ5T0F9 858 aaKnown RBP15.28■□□□□ 0.04
NSMCE2-207ENST00000519712 AMIGO3Q86WK7 504 aa15.28■□□□□ 0.04
NSMCE2-207ENST00000519712 LINC00116Q8NCU8 138 aa15.28■□□□□ 0.04
NSMCE2-207ENST00000519712 VIRMAQ69YN4 1812 aaKnown RBP15.28■□□□□ 0.04
NSMCE2-207ENST00000519712 ITPK1Q13572 414 aa15.27■□□□□ 0.04
NSMCE2-207ENST00000519712 AK7Q96M32 723 aa15.27■□□□□ 0.04
NSMCE2-207ENST00000519712 SSFA2P28290 1259 aa15.26■□□□□ 0.03
NSMCE2-207ENST00000519712 SLC4A9Q96Q91 983 aa15.26■□□□□ 0.03
NSMCE2-207ENST00000519712 C1orf141Q5JVX7 400 aa15.25■□□□□ 0.03
NSMCE2-207ENST00000519712 CHD4Q14839 1912 aa15.25■□□□□ 0.03
NSMCE2-207ENST00000519712 UTRNP46939 3433 aa15.24■□□□□ 0.03
NSMCE2-207ENST00000519712 TJP1Q07157 1748 aa15.24■□□□□ 0.03
NSMCE2-207ENST00000519712 DIAPH1O60610 1272 aaKnown RBP15.24■□□□□ 0.03
NSMCE2-207ENST00000519712 ATP6V1AP38606 617 aa15.24■□□□□ 0.03
NSMCE2-207ENST00000519712 AKAP4Q5JQC9 854 aa15.24■□□□□ 0.03
NSMCE2-207ENST00000519712 MYH14Q7Z406 1995 aaKnown RBP15.24■□□□□ 0.03
NSMCE2-207ENST00000519712 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.23■□□□□ 0.03
NSMCE2-207ENST00000519712 CABP4P57796 275 aa15.23■□□□□ 0.03
NSMCE2-207ENST00000519712 CNTNAP4Q9C0A0 1308 aa15.22■□□□□ 0.03
NSMCE2-207ENST00000519712 YY1P25490 414 aa15.22■□□□□ 0.03
NSMCE2-207ENST00000519712 C4AP0C0L4 1744 aa15.21■□□□□ 0.03
NSMCE2-207ENST00000519712 HMOX1P09601 288 aa15.21■□□□□ 0.03
NSMCE2-207ENST00000519712 RC3H1Q5TC82 1133 aaKnown RBP15.21■□□□□ 0.03
NSMCE2-207ENST00000519712 MSL1Q68DK7 614 aa15.21■□□□□ 0.03
NSMCE2-207ENST00000519712 GNPATO15228 680 aa15.2■□□□□ 0.02
NSMCE2-207ENST00000519712 NFATC2IPQ8NCF5 419 aa15.2■□□□□ 0.02
NSMCE2-207ENST00000519712 NLGN2Q8NFZ4 835 aa15.2■□□□□ 0.02
NSMCE2-207ENST00000519712 SLC52A2Q9HAB3 445 aa15.2■□□□□ 0.02
NSMCE2-207ENST00000519712 UBR2Q8IWV8 1755 aa15.2■□□□□ 0.02
NSMCE2-207ENST00000519712 KCPQ6ZWJ8 1503 aa15.19■□□□□ 0.02
NSMCE2-207ENST00000519712 RNMTO43148 476 aaKnown RBP15.19■□□□□ 0.02
NSMCE2-207ENST00000519712 PHF14O94880 888 aa15.19■□□□□ 0.02
NSMCE2-207ENST00000519712 MTHFSDQ2M296 383 aaKnown RBP15.19■□□□□ 0.02
NSMCE2-207ENST00000519712 KIF13BQ9NQT8 1826 aa15.19■□□□□ 0.02
NSMCE2-207ENST00000519712 SIPA1L3O60292 1781 aaPredicted RBP15.19■□□□□ 0.02
NSMCE2-207ENST00000519712 SMIM5Q71RC9 77 aa15.18■□□□□ 0.02
NSMCE2-207ENST00000519712 RBM42Q9BTD8 480 aaKnown RBP15.18■□□□□ 0.02
NSMCE2-207ENST00000519712 CD2APQ9Y5K6 639 aa15.18■□□□□ 0.02
NSMCE2-207ENST00000519712 RPS6KA4O75676 772 aa15.17■□□□□ 0.02
NSMCE2-207ENST00000519712 LGR6Q9HBX8 967 aa15.17■□□□□ 0.02
NSMCE2-207ENST00000519712 RTCBQ9Y3I0 505 aaKnown RBP15.17■□□□□ 0.02
NSMCE2-207ENST00000519712 KLHL34Q8N239 644 aa15.16■□□□□ 0.02
NSMCE2-207ENST00000519712 KIAA1551Q9HCM1 1747 aa15.16■□□□□ 0.02
NSMCE2-207ENST00000519712 GOLGB1Q14789 3259 aaKnown RBP15.15■□□□□ 0.02
NSMCE2-207ENST00000519712 PPP2R1AP30153 589 aa15.15■□□□□ 0.02
NSMCE2-207ENST00000519712 CEMIPQ8WUJ3 1361 aa15.14■□□□□ 0.01
NSMCE2-207ENST00000519712 PTCD1O75127 700 aaKnown RBP15.14■□□□□ 0.01
NSMCE2-207ENST00000519712 CRKLP46109 303 aaKnown RBP15.14■□□□□ 0.01
NSMCE2-207ENST00000519712 TRAPPC3LQ5T215 181 aa15.14■□□□□ 0.01
NSMCE2-207ENST00000519712 GAS2L2Q8NHY3 880 aa15.14■□□□□ 0.01
NSMCE2-207ENST00000519712 RSPH6AQ9H0K4 717 aa15.14■□□□□ 0.01
NSMCE2-207ENST00000519712 U2SURPO15042 1029 aaKnown RBP15.13■□□□□ 0.01
NSMCE2-207ENST00000519712 GPR162Q16538 588 aa15.13■□□□□ 0.01
NSMCE2-207ENST00000519712 ARHGEF1Q92888 912 aaKnown RBP15.13■□□□□ 0.01
NSMCE2-207ENST00000519712 CFAP53Q96M91 514 aa15.13■□□□□ 0.01
NSMCE2-207ENST00000519712 C10orf71Q711Q0 1435 aa15.12■□□□□ 0.01
NSMCE2-207ENST00000519712 GYS1P13807 737 aa15.12■□□□□ 0.01
NSMCE2-207ENST00000519712 YBX3P16989 372 aaKnown RBP eCLIP15.12■□□□□ 0.01
NSMCE2-207ENST00000519712 VSIG10Q8N0Z9 540 aa15.12■□□□□ 0.01
NSMCE2-207ENST00000519712 NLGN1Q8N2Q7 840 aa15.12■□□□□ 0.01
NSMCE2-207ENST00000519712 MMP10P09238 476 aa15.11■□□□□ 0.01
NSMCE2-207ENST00000519712 CNGB1Q14028 1251 aaPredicted RBP15.11■□□□□ 0.01
NSMCE2-207ENST00000519712 INTS5Q6P9B9 1019 aaKnown RBP15.11■□□□□ 0.01
NSMCE2-207ENST00000519712 USP42Q9H9J4 1324 aaKnown RBP15.11■□□□□ 0.01
NSMCE2-207ENST00000519712 GNAT3A8MTJ3 354 aa15.1■□□□□ 0.01
NSMCE2-207ENST00000519712 PRKAR2BP31323 418 aa15.1■□□□□ 0.01
NSMCE2-207ENST00000519712 SLC39A6Q13433 755 aa15.1■□□□□ 0.01
NSMCE2-207ENST00000519712 DNAJC10Q8IXB1 793 aa15.1■□□□□ 0.01
NSMCE2-207ENST00000519712 ZNF784Q8NCA9 323 aaPredicted RBP15.1■□□□□ 0.01
NSMCE2-207ENST00000519712 IL17REQ8NFR9 667 aa15.1■□□□□ 0.01
NSMCE2-207ENST00000519712 NUDCQ9Y266 331 aa15.1■□□□□ 0.01
NSMCE2-207ENST00000519712 U3KPZ7 1027 aaPredicted RBP15.1■□□□□ 0.01
NSMCE2-207ENST00000519712 PXDNLA1KZ92 1463 aa15.09■□□□□ 0.01
NSMCE2-207ENST00000519712 GRIN3BO60391 1043 aa15.09■□□□□ 0.01
NSMCE2-207ENST00000519712 CYP19A1P11511 503 aaPredicted RBP15.09■□□□□ 0.01
NSMCE2-207ENST00000519712 RFC4P35249 363 aa15.09■□□□□ 0.01
NSMCE2-207ENST00000519712 PHACTR3Q96KR7 559 aa15.09■□□□□ 0.01
NSMCE2-207ENST00000519712 CCDC87Q9NVE4 849 aa15.09■□□□□ 0.01
NSMCE2-207ENST00000519712 BRCA1P38398 1863 aaKnown RBP15.09■□□□□ 0.01
NSMCE2-207ENST00000519712 SOS1Q07889 1333 aaPredicted RBP15.09■□□□□ 0.01
NSMCE2-207ENST00000519712 FCHSD2O94868 740 aa15.08■□□□□ 0
NSMCE2-207ENST00000519712 NRXN2Q9P2S2 1712 aa15.06■□□□□ 0
NSMCE2-207ENST00000519712 ZNF790Q6PG37 636 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms